RNA–Protein interactions for RNA: ENST00000417348.2

SLC39A1-206, Transcript of solute carrier family 39 member 1, humanhuman

TSL 3

Gene SLC39A1, Length 912 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC39A1-206ENST00000417348 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP25.23■■□□□ 1.63
SLC39A1-206ENST00000417348 GNAI1P63096 354 aa25.23■■□□□ 1.63
SLC39A1-206ENST00000417348 TRAPPC3LQ5T215 181 aa25.23■■□□□ 1.63
SLC39A1-206ENST00000417348 FAM9BQ8IZU0 186 aa25.23■■□□□ 1.63
SLC39A1-206ENST00000417348 SOS1Q07889 1333 aaPredicted RBP25.22■■□□□ 1.63
SLC39A1-206ENST00000417348 KCNQ3O43525 872 aa25.22■■□□□ 1.63
SLC39A1-206ENST00000417348 GIGYF1O75420 1035 aaPredicted RBP25.22■■□□□ 1.63
SLC39A1-206ENST00000417348 HOXB7P09629 217 aa25.22■■□□□ 1.63
SLC39A1-206ENST00000417348 COL23A1Q86Y22 540 aaPredicted RBP25.22■■□□□ 1.63
SLC39A1-206ENST00000417348 WDR63Q8IWG1 891 aa25.22■■□□□ 1.63
SLC39A1-206ENST00000417348 WWC1Q8IX03 1113 aa25.22■■□□□ 1.63
SLC39A1-206ENST00000417348 LAMB4A4D0S4 1761 aa25.22■■□□□ 1.63
SLC39A1-206ENST00000417348 ERBB4Q15303 1308 aa25.21■■□□□ 1.63
SLC39A1-206ENST00000417348 RGL2O15211 777 aa25.21■■□□□ 1.63
SLC39A1-206ENST00000417348 IL6STP40189 918 aaPredicted RBP25.2■■□□□ 1.62
SLC39A1-206ENST00000417348 CHMP4AQ9BY43 222 aa25.2■■□□□ 1.62
SLC39A1-206ENST00000417348 A0A087WZG4 1122 aa25.18■■□□□ 1.62
SLC39A1-206ENST00000417348 SGIP1Q9BQI5 828 aa25.18■■□□□ 1.62
SLC39A1-206ENST00000417348 MIS18AQ9NYP9 233 aa25.18■■□□□ 1.62
SLC39A1-206ENST00000417348 EIF5P55010 431 aaKnown RBP25.17■■□□□ 1.62
SLC39A1-206ENST00000417348 MIER1Q8N108 512 aa25.16■■□□□ 1.62
SLC39A1-206ENST00000417348 ARHGEF1Q92888 912 aaKnown RBP25.16■■□□□ 1.62
SLC39A1-206ENST00000417348 PDGFDQ9GZP0 370 aaPredicted RBP25.16■■□□□ 1.62
SLC39A1-206ENST00000417348 USP16Q9Y5T5 823 aa25.16■■□□□ 1.62
SLC39A1-206ENST00000417348 RFC4P35249 363 aa25.15■■□□□ 1.62
SLC39A1-206ENST00000417348 AMIGO3Q86WK7 504 aa25.15■■□□□ 1.62
SLC39A1-206ENST00000417348 NLGN1Q8N2Q7 840 aa25.15■■□□□ 1.62
SLC39A1-206ENST00000417348 ZBTB1Q9Y2K1 713 aa25.15■■□□□ 1.62
SLC39A1-206ENST00000417348 C4AP0C0L4 1744 aa25.15■■□□□ 1.62
SLC39A1-206ENST00000417348 PTGER2P43116 358 aa25.14■■□□□ 1.62
SLC39A1-206ENST00000417348 COL15A1P39059 1388 aa25.14■■□□□ 1.61
SLC39A1-206ENST00000417348 MBIPQ9NS73 344 aa25.13■■□□□ 1.61
SLC39A1-206ENST00000417348 USP42Q9H9J4 1324 aaKnown RBP25.12■■□□□ 1.61
SLC39A1-206ENST00000417348 ZBTB7AO95365 584 aa25.12■■□□□ 1.61
SLC39A1-206ENST00000417348 POLD1P28340 1107 aa25.12■■□□□ 1.61
SLC39A1-206ENST00000417348 NARFQ9UHQ1 456 aa25.12■■□□□ 1.61
SLC39A1-206ENST00000417348 ZNF521Q96K83 1311 aa25.12■■□□□ 1.61
SLC39A1-206ENST00000417348 PHF14O94880 888 aa25.11■■□□□ 1.61
SLC39A1-206ENST00000417348 NPM2Q86SE8 214 aaKnown RBP25.11■■□□□ 1.61
SLC39A1-206ENST00000417348 SRCAPQ6ZRS2 3230 aa25.11■■□□□ 1.61
SLC39A1-206ENST00000417348 MSH5O43196 834 aa25.1■■□□□ 1.61
SLC39A1-206ENST00000417348 ZPR1O75312 459 aa25.08■■□□□ 1.61
SLC39A1-206ENST00000417348 A1BGP04217 495 aa25.08■■□□□ 1.61
SLC39A1-206ENST00000417348 GYS1P13807 737 aa25.08■■□□□ 1.61
SLC39A1-206ENST00000417348 LAS1LQ9Y4W2 734 aaKnown RBP25.08■■□□□ 1.61
SLC39A1-206ENST00000417348 PRAMEF22A3QJZ6 481 aa25.07■■□□□ 1.6
SLC39A1-206ENST00000417348 CANXP27824 592 aaKnown RBP25.07■■□□□ 1.6
SLC39A1-206ENST00000417348 CLEC4GQ6UXB4 293 aa25.06■■□□□ 1.6
SLC39A1-206ENST00000417348 ARXQ96QS3 562 aa25.05■■□□□ 1.6
SLC39A1-206ENST00000417348 MYH16Q9H6N6 1097 aa25.05■■□□□ 1.6
SLC39A1-206ENST00000417348 ATF5Q9Y2D1 282 aaPredicted RBP25.05■■□□□ 1.6
SLC39A1-206ENST00000417348 SCN7AQ01118 1682 aa25.04■■□□□ 1.6
SLC39A1-206ENST00000417348 NBPF26B4DH59 902 aa25.04■■□□□ 1.6
SLC39A1-206ENST00000417348 NBPF10Q6P3W6 841 aaKnown RBP25.04■■□□□ 1.6
SLC39A1-206ENST00000417348 NBPF15Q8N660 670 aa25.04■■□□□ 1.6
SLC39A1-206ENST00000417348 ERVV-1B6SEH8 477 aa25.02■■□□□ 1.6
SLC39A1-206ENST00000417348 DUSP27Q5VZP5 1158 aa25.02■■□□□ 1.6
SLC39A1-206ENST00000417348 DDX21Q9NR30 783 aaKnown RBP eCLIP25.02■■□□□ 1.6
SLC39A1-206ENST00000417348 BCORQ6W2J9 1755 aa25.01■■□□□ 1.59
SLC39A1-206ENST00000417348 GOLGA2Q08379 1002 aa25.01■■□□□ 1.59
SLC39A1-206ENST00000417348 DBF4Q9UBU7 674 aaPredicted RBP25.01■■□□□ 1.59
SLC39A1-206ENST00000417348 PPP1R1BQ9UD71 204 aaPredicted RBP25.01■■□□□ 1.59
SLC39A1-206ENST00000417348 TM4SF1P30408 202 aa25■■□□□ 1.59
SLC39A1-206ENST00000417348 PDIA6Q15084 440 aa25■■□□□ 1.59
SLC39A1-206ENST00000417348 LRP10Q7Z4F1 713 aa25■■□□□ 1.59
SLC39A1-206ENST00000417348 DZIP3Q86Y13 1208 aaKnown RBP25■■□□□ 1.59
SLC39A1-206ENST00000417348 ZNF652Q9Y2D9 606 aa25■■□□□ 1.59
SLC39A1-206ENST00000417348 E9PSI1 815 aa24.99■■□□□ 1.59
SLC39A1-206ENST00000417348 HDGFL1Q5TGJ6 251 aa24.99■■□□□ 1.59
SLC39A1-206ENST00000417348 USPL1Q5W0Q7 1092 aa24.99■■□□□ 1.59
SLC39A1-206ENST00000417348 FANCIQ9NVI1 1328 aa24.99■■□□□ 1.59
SLC39A1-206ENST00000417348 CAMTA2O94983 1202 aa24.98■■□□□ 1.59
SLC39A1-206ENST00000417348 SMIM5Q71RC9 77 aa24.98■■□□□ 1.59
SLC39A1-206ENST00000417348 BCL2L12Q9HB09 334 aa24.98■■□□□ 1.59
SLC39A1-206ENST00000417348 CD2APQ9Y5K6 639 aa24.98■■□□□ 1.59
SLC39A1-206ENST00000417348 HYPKQ9NX55 129 aa24.97■■□□□ 1.59
SLC39A1-206ENST00000417348 MMP10P09238 476 aa24.96■■□□□ 1.59
SLC39A1-206ENST00000417348 FKBP8Q14318 412 aa24.96■■□□□ 1.59
SLC39A1-206ENST00000417348 CCDC30Q5VVM6 783 aa24.96■■□□□ 1.59
SLC39A1-206ENST00000417348 SRP68Q9UHB9 627 aaKnown RBP24.96■■□□□ 1.59
SLC39A1-206ENST00000417348 CACNA1FO60840 1977 aa24.95■■□□□ 1.58
SLC39A1-206ENST00000417348 EIF2S2P20042 333 aaKnown RBP24.95■■□□□ 1.58
SLC39A1-206ENST00000417348 KRT24Q2M2I5 525 aa24.95■■□□□ 1.58
SLC39A1-206ENST00000417348 C8orf58Q8NAV2 365 aa24.95■■□□□ 1.58
SLC39A1-206ENST00000417348 PARP3Q9Y6F1 533 aa24.95■■□□□ 1.58
SLC39A1-206ENST00000417348 MAP3K15Q6ZN16 1313 aa24.94■■□□□ 1.58
SLC39A1-206ENST00000417348 KIF13BQ9NQT8 1826 aa24.94■■□□□ 1.58
SLC39A1-206ENST00000417348 TWISTNBQ3B726 338 aaPredicted RBP24.94■■□□□ 1.58
SLC39A1-206ENST00000417348 MSL1Q68DK7 614 aa24.94■■□□□ 1.58
SLC39A1-206ENST00000417348 TSR2Q969E8 191 aaKnown RBP24.94■■□□□ 1.58
SLC39A1-206ENST00000417348 TBC1D2BQ9UPU7 963 aa24.94■■□□□ 1.58
SLC39A1-206ENST00000417348 NRXN2Q9P2S2 1712 aa24.94■■□□□ 1.58
SLC39A1-206ENST00000417348 KIF6Q6ZMV9 814 aa24.93■■□□□ 1.58
SLC39A1-206ENST00000417348 ZNF428Q96B54 188 aa24.93■■□□□ 1.58
SLC39A1-206ENST00000417348 SALL2Q9Y467 1007 aaPredicted RBP24.93■■□□□ 1.58
SLC39A1-206ENST00000417348 ATP10DQ9P241 1426 aa24.93■■□□□ 1.58
SLC39A1-206ENST00000417348 TRMT2AQ8IZ69 625 aaKnown RBP24.92■■□□□ 1.58
SLC39A1-206ENST00000417348 ZNF330Q9Y3S2 320 aaPredicted RBP24.92■■□□□ 1.58
SLC39A1-206ENST00000417348 CARMIL3Q8ND23 1372 aa24.92■■□□□ 1.58
SLC39A1-206ENST00000417348 POLRMTO00411 1230 aaKnown RBP24.91■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 97.9 ms