RNA–Protein interactions for RNA: ENST00000416942.2

GTF3AP1-201, Transcript of general transcription factor IIIA pseudogene 1, humanhuman

BASIC

Gene GTF3AP1, Length 1,004 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3AP1-201ENST00000416942 PBXIP1Q96AQ6 731 aa10.87□□□□□ -0.67
GTF3AP1-201ENST00000416942 SEC13P55735 322 aa10.86□□□□□ -0.67
GTF3AP1-201ENST00000416942 GNASQ5JWF2 1037 aa10.86□□□□□ -0.67
GTF3AP1-201ENST00000416942 NBPF10Q6P3W6 841 aaKnown RBP10.86□□□□□ -0.67
GTF3AP1-201ENST00000416942 TAS1R3Q7RTX0 852 aa10.86□□□□□ -0.67
GTF3AP1-201ENST00000416942 NBPF15Q8N660 670 aa10.86□□□□□ -0.67
GTF3AP1-201ENST00000416942 NXF1Q9UBU9 619 aaKnown RBP10.86□□□□□ -0.67
GTF3AP1-201ENST00000416942 RAD54L2Q9Y4B4 1467 aa10.86□□□□□ -0.67
GTF3AP1-201ENST00000416942 SENP3-EIF4A1A0A087X0R7 540 aa10.85□□□□□ -0.67
GTF3AP1-201ENST00000416942 SLC35F4A4IF30 521 aa10.85□□□□□ -0.67
GTF3AP1-201ENST00000416942 M0R2N6 131 aa10.85□□□□□ -0.67
GTF3AP1-201ENST00000416942 EPHA4P54764 986 aa10.85□□□□□ -0.67
GTF3AP1-201ENST00000416942 TNS4Q8IZW8 715 aa10.85□□□□□ -0.67
GTF3AP1-201ENST00000416942 RHBDD1Q8TEB9 315 aa10.85□□□□□ -0.67
GTF3AP1-201ENST00000416942 ZNF775Q96BV0 537 aaPredicted RBP10.85□□□□□ -0.67
GTF3AP1-201ENST00000416942 SYNJ1O43426 1573 aa10.85□□□□□ -0.67
GTF3AP1-201ENST00000416942 CDK2AP1O14519 115 aa10.84□□□□□ -0.67
GTF3AP1-201ENST00000416942 WDR44Q5JSH3 913 aa10.84□□□□□ -0.67
GTF3AP1-201ENST00000416942 ARXQ96QS3 562 aa10.84□□□□□ -0.67
GTF3AP1-201ENST00000416942 SCHIP1Q9P0W5 487 aaPredicted RBP10.84□□□□□ -0.67
GTF3AP1-201ENST00000416942 IQSEC3Q9UPP2 1182 aaPredicted RBP10.84□□□□□ -0.67
GTF3AP1-201ENST00000416942 ABCC8Q09428 1581 aa10.84□□□□□ -0.67
GTF3AP1-201ENST00000416942 DNMBPQ6XZF7 1577 aa10.83□□□□□ -0.68
GTF3AP1-201ENST00000416942 C4orf17Q53FE4 359 aa10.83□□□□□ -0.68
GTF3AP1-201ENST00000416942 CCDC155Q8N6L0 562 aa10.83□□□□□ -0.68
GTF3AP1-201ENST00000416942 TSEN2Q8NCE0 465 aaKnown RBP10.83□□□□□ -0.68
GTF3AP1-201ENST00000416942 ARID3AQ99856 593 aa10.83□□□□□ -0.68
GTF3AP1-201ENST00000416942 NOVA2Q9UNW9 492 aaKnown RBP10.83□□□□□ -0.68
GTF3AP1-201ENST00000416942 USP3Q9Y6I4 520 aa10.83□□□□□ -0.68
GTF3AP1-201ENST00000416942 POLA1P09884 1462 aaPredicted RBP10.82□□□□□ -0.68
GTF3AP1-201ENST00000416942 TERTO14746 1132 aaKnown RBP10.82□□□□□ -0.68
GTF3AP1-201ENST00000416942 PPFIA3O75145 1194 aa10.82□□□□□ -0.68
GTF3AP1-201ENST00000416942 ATG7O95352 703 aa10.82□□□□□ -0.68
GTF3AP1-201ENST00000416942 PHKA2P46019 1235 aa10.82□□□□□ -0.68
GTF3AP1-201ENST00000416942 NPAS3Q8IXF0 933 aa10.82□□□□□ -0.68
GTF3AP1-201ENST00000416942 TOP2AP11388 1531 aaKnown RBP10.82□□□□□ -0.68
GTF3AP1-201ENST00000416942 VEGFBP49765 207 aa10.81□□□□□ -0.68
GTF3AP1-201ENST00000416942 FOXK2Q01167 660 aa10.81□□□□□ -0.68
GTF3AP1-201ENST00000416942 ELOAQ14241 798 aaKnown RBP10.81□□□□□ -0.68
GTF3AP1-201ENST00000416942 ZNF295-AS1Q8N0V1 137 aa10.81□□□□□ -0.68
GTF3AP1-201ENST00000416942 FAM200AQ8TCP9 573 aa10.81□□□□□ -0.68
GTF3AP1-201ENST00000416942 NIFKQ9BYG3 293 aaKnown RBP10.81□□□□□ -0.68
GTF3AP1-201ENST00000416942 TIMMDC1Q9NPL8 285 aa10.81□□□□□ -0.68
GTF3AP1-201ENST00000416942 SOGA1O94964 1423 aa10.81□□□□□ -0.68
GTF3AP1-201ENST00000416942 SLC9A9Q8IVB4 645 aa10.8□□□□□ -0.68
GTF3AP1-201ENST00000416942 ZMIZ1Q9ULJ6 1067 aa10.8□□□□□ -0.68
GTF3AP1-201ENST00000416942 DYRK1BQ9Y463 629 aa10.8□□□□□ -0.68
GTF3AP1-201ENST00000416942 H3BM21 787 aa10.79□□□□□ -0.68
GTF3AP1-201ENST00000416942 PPP1R15AO75807 674 aaPredicted RBP10.79□□□□□ -0.68
GTF3AP1-201ENST00000416942 PLA2G4AP47712 749 aa10.79□□□□□ -0.68
GTF3AP1-201ENST00000416942 FAM69CQ0P6D2 419 aa10.79□□□□□ -0.68
GTF3AP1-201ENST00000416942 TBCELQ5QJ74 424 aa10.79□□□□□ -0.68
GTF3AP1-201ENST00000416942 TSPAN10Q9H1Z9 355 aaPredicted RBP10.79□□□□□ -0.68
GTF3AP1-201ENST00000416942 CABP1Q9NZU7 370 aa10.79□□□□□ -0.68
GTF3AP1-201ENST00000416942 PRDM2Q13029 1718 aa10.78□□□□□ -0.68
GTF3AP1-201ENST00000416942 NFX1Q12986 1120 aaKnown RBP10.78□□□□□ -0.68
GTF3AP1-201ENST00000416942 HINFPQ9BQA5 517 aa10.78□□□□□ -0.68
GTF3AP1-201ENST00000416942 CCDC88BA6NC98 1476 aa10.78□□□□□ -0.68
GTF3AP1-201ENST00000416942 ERCC6L2Q5T890 1561 aa10.77□□□□□ -0.68
GTF3AP1-201ENST00000416942 ITGA6P23229 1130 aa10.77□□□□□ -0.69
GTF3AP1-201ENST00000416942 STK32AQ8WU08 396 aa10.77□□□□□ -0.69
GTF3AP1-201ENST00000416942 GAS2L1Q99501 681 aaPredicted RBP10.77□□□□□ -0.69
GTF3AP1-201ENST00000416942 SYNJ2O15056 1496 aa10.76□□□□□ -0.69
GTF3AP1-201ENST00000416942 MAGI1Q96QZ7 1491 aaPredicted RBP10.76□□□□□ -0.69
GTF3AP1-201ENST00000416942 A0A1B0GTH6 734 aa10.76□□□□□ -0.69
GTF3AP1-201ENST00000416942 LGR5O75473 907 aa10.76□□□□□ -0.69
GTF3AP1-201ENST00000416942 SLC16A10Q8TF71 515 aa10.76□□□□□ -0.69
GTF3AP1-201ENST00000416942 ZDHHC1Q8WTX9 485 aa10.75□□□□□ -0.69
GTF3AP1-201ENST00000416942 PARP3Q9Y6F1 533 aa10.75□□□□□ -0.69
GTF3AP1-201ENST00000416942 C21orf2O43822 256 aa10.74□□□□□ -0.69
GTF3AP1-201ENST00000416942 F11P03951 625 aa10.74□□□□□ -0.69
GTF3AP1-201ENST00000416942 PSMA6P60900 246 aaKnown RBP10.74□□□□□ -0.69
GTF3AP1-201ENST00000416942 TEAD4Q15561 434 aa10.74□□□□□ -0.69
GTF3AP1-201ENST00000416942 RIPOR1Q6ZS17 1223 aa10.74□□□□□ -0.69
GTF3AP1-201ENST00000416942 ACIN1Q9UKV3 1341 aaKnown RBP10.74□□□□□ -0.69
GTF3AP1-201ENST00000416942 ATAD2Q6PL18 1390 aa10.74□□□□□ -0.69
GTF3AP1-201ENST00000416942 GRIN2BQ13224 1484 aa10.74□□□□□ -0.69
GTF3AP1-201ENST00000416942 KIF13AQ9H1H9 1805 aa10.73□□□□□ -0.69
GTF3AP1-201ENST00000416942 WFS1O76024 890 aa10.73□□□□□ -0.69
GTF3AP1-201ENST00000416942 MSX1P28360 303 aa10.73□□□□□ -0.69
GTF3AP1-201ENST00000416942 NOS2P35228 1153 aa10.73□□□□□ -0.69
GTF3AP1-201ENST00000416942 TMEM164Q5U3C3 297 aa10.73□□□□□ -0.69
GTF3AP1-201ENST00000416942 TREML4Q6UXN2 200 aa10.73□□□□□ -0.69
GTF3AP1-201ENST00000416942 SCG3Q8WXD2 468 aaKnown RBP10.73□□□□□ -0.69
GTF3AP1-201ENST00000416942 L3MBTL2Q969R5 705 aa10.73□□□□□ -0.69
GTF3AP1-201ENST00000416942 AIDAQ96BJ3 306 aa10.73□□□□□ -0.69
GTF3AP1-201ENST00000416942 GPAMQ9HCL2 828 aa10.73□□□□□ -0.69
GTF3AP1-201ENST00000416942 CUEDC1Q9NWM3 386 aaPredicted RBP10.73□□□□□ -0.69
GTF3AP1-201ENST00000416942 SERTM1A2A2V5 107 aa10.72□□□□□ -0.69
GTF3AP1-201ENST00000416942 PPP1R12BO60237 982 aaPredicted RBP10.72□□□□□ -0.69
GTF3AP1-201ENST00000416942 SWI5Q1ZZU3 235 aa10.72□□□□□ -0.69
GTF3AP1-201ENST00000416942 NBPF1Q3BBV0 1214 aa10.72□□□□□ -0.69
GTF3AP1-201ENST00000416942 GAS2L2Q8NHY3 880 aa10.72□□□□□ -0.69
GTF3AP1-201ENST00000416942 FBXO41Q8TF61 875 aa10.72□□□□□ -0.69
GTF3AP1-201ENST00000416942 ZNF232Q9UNY5 417 aa10.72□□□□□ -0.69
GTF3AP1-201ENST00000416942 CDC14CA4D256 554 aa10.71□□□□□ -0.69
GTF3AP1-201ENST00000416942 ERBB4Q15303 1308 aa10.71□□□□□ -0.69
GTF3AP1-201ENST00000416942 NANOS1Q8WY41 292 aaKnown RBP10.71□□□□□ -0.69
GTF3AP1-201ENST00000416942 IRF7Q92985 503 aa10.71□□□□□ -0.69
GTF3AP1-201ENST00000416942 CHMP3Q9Y3E7 222 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms