RNA–Protein interactions for RNA: ENST00000416742.5

LINC00494-201, long intergenic non-protein coding RNA 494, humanhuman

TSL 1 (best) BASIC

Gene LINC00494, Length 3,544 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00494-201ENST00000416742 GBP4Q96PP9 640 aa12.19□□□□□ -0.46
LINC00494-201ENST00000416742 ERBB3P21860 1342 aa12.19□□□□□ -0.46
LINC00494-201ENST00000416742 SALL3Q9BXA9 1300 aa12.19□□□□□ -0.46
LINC00494-201ENST00000416742 CACNA1FO60840 1977 aa12.18□□□□□ -0.46
LINC00494-201ENST00000416742 DDX11L8A8MPP1 907 aa12.18□□□□□ -0.46
LINC00494-201ENST00000416742 SSFA2P28290 1259 aa12.18□□□□□ -0.46
LINC00494-201ENST00000416742 CWF19L2Q2TBE0 894 aaKnown RBP12.18□□□□□ -0.46
LINC00494-201ENST00000416742 TMEM94Q12767 1356 aa12.18□□□□□ -0.46
LINC00494-201ENST00000416742 RAB3GAP1Q15042 981 aa12.18□□□□□ -0.46
LINC00494-201ENST00000416742 ESYT1Q9BSJ8 1104 aa12.18□□□□□ -0.46
LINC00494-201ENST00000416742 RAB11FIP3O75154 756 aa12.17□□□□□ -0.46
LINC00494-201ENST00000416742 HSPA2P54652 639 aa12.17□□□□□ -0.46
LINC00494-201ENST00000416742 CHMLP26374 656 aa12.17□□□□□ -0.46
LINC00494-201ENST00000416742 ADCY9O60503 1353 aa12.17□□□□□ -0.46
LINC00494-201ENST00000416742 MYL6BP14649 208 aa12.17□□□□□ -0.46
LINC00494-201ENST00000416742 NEK4P51957 841 aa12.17□□□□□ -0.46
LINC00494-201ENST00000416742 KSR2Q6VAB6 950 aa12.17□□□□□ -0.46
LINC00494-201ENST00000416742 NFATC2IPQ8NCF5 419 aa12.17□□□□□ -0.46
LINC00494-201ENST00000416742 KIF1BPQ96EK5 621 aa12.17□□□□□ -0.46
LINC00494-201ENST00000416742 POLA2Q14181 598 aa12.16□□□□□ -0.46
LINC00494-201ENST00000416742 STAP2Q9UGK3 403 aa12.16□□□□□ -0.46
LINC00494-201ENST00000416742 NOL8Q76FK4 1167 aaKnown RBP12.16□□□□□ -0.46
LINC00494-201ENST00000416742 PXDNLA1KZ92 1463 aa12.16□□□□□ -0.46
LINC00494-201ENST00000416742 MCCP23508 829 aa12.16□□□□□ -0.46
LINC00494-201ENST00000416742 SLIT3O75094 1523 aa12.15□□□□□ -0.46
LINC00494-201ENST00000416742 RIC3Q7Z5B4 369 aa12.15□□□□□ -0.46
LINC00494-201ENST00000416742 HYPKQ9NX55 129 aa12.15□□□□□ -0.46
LINC00494-201ENST00000416742 PA2G4Q9UQ80 394 aaKnown RBP12.15□□□□□ -0.46
LINC00494-201ENST00000416742 SPG7Q9UQ90 795 aa12.15□□□□□ -0.46
LINC00494-201ENST00000416742 GOLGA6L3A6NEY3 463 aa12.15□□□□□ -0.47
LINC00494-201ENST00000416742 DDX58O95786 925 aaKnown RBP12.15□□□□□ -0.47
LINC00494-201ENST00000416742 ZNF790Q6PG37 636 aa12.15□□□□□ -0.47
LINC00494-201ENST00000416742 PIP4K2AP48426 406 aaPredicted RBP12.14□□□□□ -0.47
LINC00494-201ENST00000416742 HSP90AB4PQ58FF6 505 aa12.14□□□□□ -0.47
LINC00494-201ENST00000416742 L1TD1Q5T7N2 865 aaKnown RBP12.14□□□□□ -0.47
LINC00494-201ENST00000416742 ALDH1L1O75891 902 aa12.14□□□□□ -0.47
LINC00494-201ENST00000416742 ZGPATQ8N5A5 531 aaKnown RBP12.14□□□□□ -0.47
LINC00494-201ENST00000416742 DDX21Q9NR30 783 aaKnown RBP eCLIP12.14□□□□□ -0.47
LINC00494-201ENST00000416742 PALD1Q9ULE6 856 aa12.14□□□□□ -0.47
LINC00494-201ENST00000416742 NPHP3Q7Z494 1330 aa12.14□□□□□ -0.47
LINC00494-201ENST00000416742 NCAPD2Q15021 1401 aa12.14□□□□□ -0.47
LINC00494-201ENST00000416742 PHKG2P15735 406 aa12.14□□□□□ -0.47
LINC00494-201ENST00000416742 CADPS2Q86UW7 1296 aa12.14□□□□□ -0.47
LINC00494-201ENST00000416742 SLC52A2Q9HAB3 445 aa12.14□□□□□ -0.47
LINC00494-201ENST00000416742 MED1Q15648 1581 aaPredicted RBP12.13□□□□□ -0.47
LINC00494-201ENST00000416742 IFNL2Q8IZJ0 200 aa12.13□□□□□ -0.47
LINC00494-201ENST00000416742 GOLGA6L22H0YM25 854 aa12.13□□□□□ -0.47
LINC00494-201ENST00000416742 CLASRPQ8N2M8 674 aaKnown RBP12.13□□□□□ -0.47
LINC00494-201ENST00000416742 FOXD4L5Q5VV16 416 aaPredicted RBP12.12□□□□□ -0.47
LINC00494-201ENST00000416742 TTC5Q8N0Z6 440 aa12.12□□□□□ -0.47
LINC00494-201ENST00000416742 FOXD4L4Q8WXT5 416 aaPredicted RBP12.12□□□□□ -0.47
LINC00494-201ENST00000416742 LINS1Q8NG48 757 aa12.12□□□□□ -0.47
LINC00494-201ENST00000416742 ZNF496Q96IT1 587 aaPredicted RBP12.12□□□□□ -0.47
LINC00494-201ENST00000416742 UPF3BQ9BZI7 483 aaKnown RBP12.12□□□□□ -0.47
LINC00494-201ENST00000416742 RGPD5Q99666 1765 aa12.12□□□□□ -0.47
LINC00494-201ENST00000416742 LMO7Q8WWI1 1683 aa12.12□□□□□ -0.47
LINC00494-201ENST00000416742 KDM3BQ7LBC6 1761 aa12.12□□□□□ -0.47
LINC00494-201ENST00000416742 GRM8O00222 908 aa12.12□□□□□ -0.47
LINC00494-201ENST00000416742 PKP1Q13835 747 aa12.12□□□□□ -0.47
LINC00494-201ENST00000416742 COPS6Q7L5N1 327 aa12.12□□□□□ -0.47
LINC00494-201ENST00000416742 PI4K2BQ8TCG2 481 aa12.12□□□□□ -0.47
LINC00494-201ENST00000416742 XAGE3Q8WTP9 111 aa12.12□□□□□ -0.47
LINC00494-201ENST00000416742 JARID2Q92833 1246 aaPredicted RBP12.12□□□□□ -0.47
LINC00494-201ENST00000416742 SUCLG2Q96I99 432 aa12.12□□□□□ -0.47
LINC00494-201ENST00000416742 IL25Q9H293 177 aa12.12□□□□□ -0.47
LINC00494-201ENST00000416742 MST1RQ04912 1400 aa12.12□□□□□ -0.47
LINC00494-201ENST00000416742 NUCB2P80303 420 aa12.11□□□□□ -0.47
LINC00494-201ENST00000416742 CNTROBQ8N137 903 aa12.11□□□□□ -0.47
LINC00494-201ENST00000416742 HDAC5Q9UQL6 1122 aa12.11□□□□□ -0.47
LINC00494-201ENST00000416742 BAG4O95429 457 aaKnown RBP12.11□□□□□ -0.47
LINC00494-201ENST00000416742 IFIT2P09913 472 aaKnown RBP12.11□□□□□ -0.47
LINC00494-201ENST00000416742 NEXNQ0ZGT2 675 aa12.11□□□□□ -0.47
LINC00494-201ENST00000416742 SIL1Q9H173 461 aa12.11□□□□□ -0.47
LINC00494-201ENST00000416742 USP16Q9Y5T5 823 aa12.11□□□□□ -0.47
LINC00494-201ENST00000416742 AOX1Q06278 1338 aa12.11□□□□□ -0.47
LINC00494-201ENST00000416742 AK9Q5TCS8 1911 aa12.11□□□□□ -0.47
LINC00494-201ENST00000416742 PDIA6Q15084 440 aa12.11□□□□□ -0.47
LINC00494-201ENST00000416742 MCTP1Q6DN14 999 aa12.11□□□□□ -0.47
LINC00494-201ENST00000416742 CWC27Q6UX04 472 aaKnown RBP12.11□□□□□ -0.47
LINC00494-201ENST00000416742 MYD88Q99836 296 aa12.11□□□□□ -0.47
LINC00494-201ENST00000416742 BICC1Q9H694 974 aaKnown RBP12.11□□□□□ -0.47
LINC00494-201ENST00000416742 G3BP1Q13283 466 aaKnown RBP eCLIP12.1□□□□□ -0.47
LINC00494-201ENST00000416742 PHRF1Q9P1Y6 1649 aaKnown RBP12.1□□□□□ -0.47
LINC00494-201ENST00000416742 HEG1Q9ULI3 1381 aa12.1□□□□□ -0.47
LINC00494-201ENST00000416742 TRPM3Q9HCF6 1732 aaPredicted RBP12.1□□□□□ -0.47
LINC00494-201ENST00000416742 CYP27B1O15528 508 aa12.1□□□□□ -0.47
LINC00494-201ENST00000416742 NCLP19338 710 aaKnown RBP12.1□□□□□ -0.47
LINC00494-201ENST00000416742 CABP4P57796 275 aa12.1□□□□□ -0.47
LINC00494-201ENST00000416742 LARP1Q6PKG0 1096 aaKnown RBP12.1□□□□□ -0.47
LINC00494-201ENST00000416742 TMX3Q96JJ7 454 aa12.1□□□□□ -0.47
LINC00494-201ENST00000416742 KIAA1211Q6ZU35 1233 aa12.1□□□□□ -0.47
LINC00494-201ENST00000416742 AACSQ86V21 672 aa12.1□□□□□ -0.47
LINC00494-201ENST00000416742 XRCC6P12956 609 aaKnown RBP eCLIP12.09□□□□□ -0.47
LINC00494-201ENST00000416742 SKOR2Q2VWA4 1001 aaPredicted RBP12.09□□□□□ -0.47
LINC00494-201ENST00000416742 CWC22Q9HCG8 908 aaKnown RBP12.09□□□□□ -0.47
LINC00494-201ENST00000416742 GLRX3O76003 335 aaKnown RBP12.09□□□□□ -0.47
LINC00494-201ENST00000416742 IGKV5-2P06315 115 aa12.09□□□□□ -0.47
LINC00494-201ENST00000416742 MTX1Q13505 466 aa12.09□□□□□ -0.47
LINC00494-201ENST00000416742 KLHDC4Q8TBB5 520 aa12.09□□□□□ -0.47
LINC00494-201ENST00000416742 CCDC8Q9H0W5 538 aaPredicted RBP12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 199.6 ms