RNA–Protein interactions for RNA: ENST00000416431.5

CRIP3-203, Transcript of cysteine rich protein 3, humanhuman

TSL 3

Gene CRIP3, Length 430 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRIP3-203ENST00000416431 CCDC146Q8IYE0 955 aa13.2□□□□□ -0.3
CRIP3-203ENST00000416431 VSIG10Q8N0Z9 540 aa13.2□□□□□ -0.3
CRIP3-203ENST00000416431 RUNDC1Q96C34 613 aa13.2□□□□□ -0.3
CRIP3-203ENST00000416431 MIS18AQ9NYP9 233 aa13.2□□□□□ -0.3
CRIP3-203ENST00000416431 ZBTB1Q9Y2K1 713 aa13.2□□□□□ -0.3
CRIP3-203ENST00000416431 HEG1Q9ULI3 1381 aa13.2□□□□□ -0.3
CRIP3-203ENST00000416431 HTATSF1O43719 755 aaKnown RBP13.19□□□□□ -0.3
CRIP3-203ENST00000416431 MMP10P09238 476 aa13.19□□□□□ -0.3
CRIP3-203ENST00000416431 GYS1P13807 737 aa13.19□□□□□ -0.3
CRIP3-203ENST00000416431 CANXP27824 592 aaKnown RBP13.19□□□□□ -0.3
CRIP3-203ENST00000416431 PELP1Q8IZL8 1130 aaKnown RBP13.19□□□□□ -0.3
CRIP3-203ENST00000416431 FMNL2Q96PY5 1086 aa13.19□□□□□ -0.3
CRIP3-203ENST00000416431 THUMPD2Q9BTF0 503 aaKnown RBP13.19□□□□□ -0.3
CRIP3-203ENST00000416431 TAF7Q15545 349 aaPredicted RBP13.18□□□□□ -0.3
CRIP3-203ENST00000416431 SOS1Q07889 1333 aaPredicted RBP13.17□□□□□ -0.3
CRIP3-203ENST00000416431 PRAMEF22A3QJZ6 481 aa13.17□□□□□ -0.3
CRIP3-203ENST00000416431 STARD3NLO95772 234 aa13.17□□□□□ -0.3
CRIP3-203ENST00000416431 RIPK4P57078 832 aa13.17□□□□□ -0.3
CRIP3-203ENST00000416431 LMOD3Q0VAK6 560 aa13.17□□□□□ -0.3
CRIP3-203ENST00000416431 GPR162Q16538 588 aa13.17□□□□□ -0.3
CRIP3-203ENST00000416431 NLGN1Q8N2Q7 840 aa13.17□□□□□ -0.3
CRIP3-203ENST00000416431 RRP7AQ9Y3A4 280 aaKnown RBP13.17□□□□□ -0.3
CRIP3-203ENST00000416431 USP42Q9H9J4 1324 aaKnown RBP13.16□□□□□ -0.3
CRIP3-203ENST00000416431 ZPR1O75312 459 aa13.16□□□□□ -0.3
CRIP3-203ENST00000416431 FKBP8Q14318 412 aa13.16□□□□□ -0.3
CRIP3-203ENST00000416431 NEUROD2Q15784 382 aa13.16□□□□□ -0.3
CRIP3-203ENST00000416431 USPL1Q5W0Q7 1092 aa13.16□□□□□ -0.3
CRIP3-203ENST00000416431 TEX13AQ9BXU3 409 aaPredicted RBP13.16□□□□□ -0.3
CRIP3-203ENST00000416431 WWC3Q9ULE0 1092 aa13.16□□□□□ -0.3
CRIP3-203ENST00000416431 ZNF330Q9Y3S2 320 aaPredicted RBP13.16□□□□□ -0.3
CRIP3-203ENST00000416431 CD2APQ9Y5K6 639 aa13.16□□□□□ -0.3
CRIP3-203ENST00000416431 COL15A1P39059 1388 aa13.16□□□□□ -0.3
CRIP3-203ENST00000416431 A1BGP04217 495 aa13.15□□□□□ -0.3
CRIP3-203ENST00000416431 TMPOP42166 694 aaKnown RBP13.15□□□□□ -0.3
CRIP3-203ENST00000416431 PIP4K2AP48426 406 aaPredicted RBP13.15□□□□□ -0.3
CRIP3-203ENST00000416431 USP16Q9Y5T5 823 aa13.15□□□□□ -0.3
CRIP3-203ENST00000416431 NARFQ9UHQ1 456 aa13.14□□□□□ -0.31
CRIP3-203ENST00000416431 PARP3Q9Y6F1 533 aa13.14□□□□□ -0.31
CRIP3-203ENST00000416431 SNRPA1P09661 255 aaKnown RBP13.13□□□□□ -0.31
CRIP3-203ENST00000416431 EIF5P55010 431 aaKnown RBP13.13□□□□□ -0.31
CRIP3-203ENST00000416431 KDM3BQ7LBC6 1761 aa13.12□□□□□ -0.31
CRIP3-203ENST00000416431 APAF1O14727 1248 aa13.12□□□□□ -0.31
CRIP3-203ENST00000416431 YBX3P16989 372 aaKnown RBP eCLIP13.12□□□□□ -0.31
CRIP3-203ENST00000416431 YY1P25490 414 aa13.12□□□□□ -0.31
CRIP3-203ENST00000416431 DDR1Q08345 913 aa13.12□□□□□ -0.31
CRIP3-203ENST00000416431 NGEFQ8N5V2 710 aa13.12□□□□□ -0.31
CRIP3-203ENST00000416431 TBC1D2BQ9UPU7 963 aa13.12□□□□□ -0.31
CRIP3-203ENST00000416431 A0A087WZG4 1122 aa13.11□□□□□ -0.31
CRIP3-203ENST00000416431 IL6STP40189 918 aaPredicted RBP13.11□□□□□ -0.31
CRIP3-203ENST00000416431 CALD1Q05682 793 aaKnown RBP13.11□□□□□ -0.31
CRIP3-203ENST00000416431 NPM2Q86SE8 214 aaKnown RBP13.11□□□□□ -0.31
CRIP3-203ENST00000416431 BCL2L12Q9HB09 334 aa13.11□□□□□ -0.31
CRIP3-203ENST00000416431 N4BP2Q86UW6 1770 aaPredicted RBP13.11□□□□□ -0.31
CRIP3-203ENST00000416431 CHD4Q14839 1912 aa13.11□□□□□ -0.31
CRIP3-203ENST00000416431 KIF13BQ9NQT8 1826 aa13.11□□□□□ -0.31
CRIP3-203ENST00000416431 POLRMTO00411 1230 aaKnown RBP13.1□□□□□ -0.31
CRIP3-203ENST00000416431 TM4SF1P30408 202 aa13.1□□□□□ -0.31
CRIP3-203ENST00000416431 EIF4A1P60842 406 aaKnown RBP13.1□□□□□ -0.31
CRIP3-203ENST00000416431 BICDL1Q6ZP65 573 aa13.1□□□□□ -0.31
CRIP3-203ENST00000416431 TSPYL4Q9UJ04 414 aa13.1□□□□□ -0.31
CRIP3-203ENST00000416431 AFDNP55196 1824 aaKnown RBP13.09□□□□□ -0.31
CRIP3-203ENST00000416431 A0A0G2JLW4 131 aa13.09□□□□□ -0.31
CRIP3-203ENST00000416431 NFIXQ14938 502 aa13.09□□□□□ -0.31
CRIP3-203ENST00000416431 NCBP3Q53F19 620 aaKnown RBP13.09□□□□□ -0.31
CRIP3-203ENST00000416431 C10orf71Q711Q0 1435 aa13.09□□□□□ -0.31
CRIP3-203ENST00000416431 TRIM35Q9UPQ4 493 aa13.09□□□□□ -0.31
CRIP3-203ENST00000416431 LAS1LQ9Y4W2 734 aaKnown RBP13.09□□□□□ -0.31
CRIP3-203ENST00000416431 LAMB4A4D0S4 1761 aa13.08□□□□□ -0.32
CRIP3-203ENST00000416431 SENP3-EIF4A1A0A087X0R7 540 aa13.08□□□□□ -0.32
CRIP3-203ENST00000416431 NBPF26B4DH59 902 aa13.08□□□□□ -0.32
CRIP3-203ENST00000416431 GIGYF1O75420 1035 aaPredicted RBP13.08□□□□□ -0.32
CRIP3-203ENST00000416431 NBPF10Q6P3W6 841 aaKnown RBP13.08□□□□□ -0.32
CRIP3-203ENST00000416431 NBPF15Q8N660 670 aa13.08□□□□□ -0.32
CRIP3-203ENST00000416431 PXDNLA1KZ92 1463 aa13.08□□□□□ -0.32
CRIP3-203ENST00000416431 KIAA1551Q9HCM1 1747 aa13.08□□□□□ -0.32
CRIP3-203ENST00000416431 DPEP1P16444 411 aa13.07□□□□□ -0.32
CRIP3-203ENST00000416431 TBC1D9BQ66K14 1250 aa13.07□□□□□ -0.32
CRIP3-203ENST00000416431 DZIP3Q86Y13 1208 aaKnown RBP13.07□□□□□ -0.32
CRIP3-203ENST00000416431 SCN7AQ01118 1682 aa13.07□□□□□ -0.32
CRIP3-203ENST00000416431 GRIN3BO60391 1043 aa13.06□□□□□ -0.32
CRIP3-203ENST00000416431 CAMTA2O94983 1202 aa13.06□□□□□ -0.32
CRIP3-203ENST00000416431 SERPINB2P05120 415 aa13.06□□□□□ -0.32
CRIP3-203ENST00000416431 TGFB2P61812 414 aa13.06□□□□□ -0.32
CRIP3-203ENST00000416431 CCDC27Q2M243 656 aa13.06□□□□□ -0.32
CRIP3-203ENST00000416431 BCORQ6W2J9 1755 aa13.05□□□□□ -0.32
CRIP3-203ENST00000416431 MYL6BP14649 208 aa13.05□□□□□ -0.32
CRIP3-203ENST00000416431 CHRNA5P30532 468 aa13.05□□□□□ -0.32
CRIP3-203ENST00000416431 SALL2Q9Y467 1007 aaPredicted RBP13.05□□□□□ -0.32
CRIP3-203ENST00000416431 EIF2S2P20042 333 aaKnown RBP13.04□□□□□ -0.32
CRIP3-203ENST00000416431 CCDC24Q8N4L8 307 aa13.04□□□□□ -0.32
CRIP3-203ENST00000416431 BABAM1Q9NWV8 329 aa13.04□□□□□ -0.32
CRIP3-203ENST00000416431 BCS1LQ9Y276 419 aa13.04□□□□□ -0.32
CRIP3-203ENST00000416431 NRXN2Q9P2S2 1712 aa13.04□□□□□ -0.32
CRIP3-203ENST00000416431 CHL1O00533 1208 aa13.03□□□□□ -0.32
CRIP3-203ENST00000416431 KCNA3P22001 575 aa13.03□□□□□ -0.32
CRIP3-203ENST00000416431 KRT24Q2M2I5 525 aa13.03□□□□□ -0.32
CRIP3-203ENST00000416431 NECTIN2Q92692 538 aa13.03□□□□□ -0.32
CRIP3-203ENST00000416431 SETDB2Q96T68 719 aa13.03□□□□□ -0.32
CRIP3-203ENST00000416431 BRCA1P38398 1863 aaKnown RBP13.03□□□□□ -0.32
CRIP3-203ENST00000416431 GNAI1P63096 354 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms