RNA–Protein interactions for RNA: ENST00000415428.5

LMBR1-204, Transcript of limb development membrane protein 1, humanhuman

TSL 1 (best)

Gene LMBR1, Length 3,457 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-204ENST00000415428 INTS5Q6P9B9 1019 aaKnown RBP8.88□□□□□ -0.99
LMBR1-204ENST00000415428 SAFB2Q14151 953 aaKnown RBP eCLIP8.87□□□□□ -0.99
LMBR1-204ENST00000415428 SPG7Q9UQ90 795 aa8.87□□□□□ -0.99
LMBR1-204ENST00000415428 A0A1B0GUL6 1792 aa8.87□□□□□ -0.99
LMBR1-204ENST00000415428 NFKBIEO00221 500 aa8.87□□□□□ -0.99
LMBR1-204ENST00000415428 AKAP11Q9UKA4 1901 aa8.87□□□□□ -0.99
LMBR1-204ENST00000415428 MAP2K1Q02750 393 aaPredicted RBP8.86□□□□□ -0.99
LMBR1-204ENST00000415428 ABHD8Q96I13 439 aa8.86□□□□□ -0.99
LMBR1-204ENST00000415428 FYB1O15117 783 aa8.85□□□□□ -0.99
LMBR1-204ENST00000415428 MMP10P09238 476 aa8.85□□□□□ -0.99
LMBR1-204ENST00000415428 NLRP2Q9NX02 1062 aa8.85□□□□□ -0.99
LMBR1-204ENST00000415428 FZD9O00144 591 aa8.85□□□□□ -0.99
LMBR1-204ENST00000415428 BRPF1P55201 1214 aaPredicted RBP8.85□□□□□ -0.99
LMBR1-204ENST00000415428 ARHGEF1Q92888 912 aaKnown RBP8.85□□□□□ -0.99
LMBR1-204ENST00000415428 NARFQ9UHQ1 456 aa8.85□□□□□ -0.99
LMBR1-204ENST00000415428 SRCAPQ6ZRS2 3230 aa8.84□□□□□ -0.99
LMBR1-204ENST00000415428 COL1A1P02452 1464 aaPredicted RBP8.84□□□□□ -0.99
LMBR1-204ENST00000415428 AMOTQ4VCS5 1084 aa8.84□□□□□ -0.99
LMBR1-204ENST00000415428 IFNL2Q8IZJ0 200 aa8.84□□□□□ -0.99
LMBR1-204ENST00000415428 TRAPPC3LQ5T215 181 aa8.84□□□□□ -1
LMBR1-204ENST00000415428 TLL2Q9Y6L7 1015 aa8.84□□□□□ -1
LMBR1-204ENST00000415428 CSB-PGBD3P0DP91 1061 aa8.83□□□□□ -1
LMBR1-204ENST00000415428 GCC1Q96CN9 775 aa8.83□□□□□ -1
LMBR1-204ENST00000415428 PSMD1Q99460 953 aa8.83□□□□□ -1
LMBR1-204ENST00000415428 BCL2L12Q9HB09 334 aa8.83□□□□□ -1
LMBR1-204ENST00000415428 PRPF38BQ5VTL8 546 aaKnown RBP8.83□□□□□ -1
LMBR1-204ENST00000415428 IQCA1LA6NCM1 817 aa8.82□□□□□ -1
LMBR1-204ENST00000415428 COG3Q96JB2 828 aa8.82□□□□□ -1
LMBR1-204ENST00000415428 TMEM88BA6NKF7 163 aa8.82□□□□□ -1
LMBR1-204ENST00000415428 RTCBQ9Y3I0 505 aaKnown RBP8.82□□□□□ -1
LMBR1-204ENST00000415428 COL2A1P02458 1487 aaPredicted RBP8.82□□□□□ -1
LMBR1-204ENST00000415428 HEG1Q9ULI3 1381 aa8.82□□□□□ -1
LMBR1-204ENST00000415428 BRIP1Q9BX63 1249 aa8.81□□□□□ -1
LMBR1-204ENST00000415428 RRAGCQ9HB90 399 aa8.81□□□□□ -1
LMBR1-204ENST00000415428 PARP3Q9Y6F1 533 aa8.81□□□□□ -1
LMBR1-204ENST00000415428 COL15A1P39059 1388 aa8.81□□□□□ -1
LMBR1-204ENST00000415428 CARMIL3Q8ND23 1372 aa8.81□□□□□ -1
LMBR1-204ENST00000415428 MLLT1Q03111 559 aaPredicted RBP8.81□□□□□ -1
LMBR1-204ENST00000415428 C16orf71Q8IYS4 520 aaPredicted RBP8.81□□□□□ -1
LMBR1-204ENST00000415428 RTFDC1Q9BY42 306 aaPredicted RBP8.81□□□□□ -1
LMBR1-204ENST00000415428 L3MBTL2Q969R5 705 aa8.8□□□□□ -1
LMBR1-204ENST00000415428 A0A087WZG4 1122 aa8.8□□□□□ -1
LMBR1-204ENST00000415428 RNF123Q5XPI4 1314 aa8.8□□□□□ -1
LMBR1-204ENST00000415428 PNMA8AQ86V59 439 aaPredicted RBP8.79□□□□□ -1
LMBR1-204ENST00000415428 RAPGEF4Q8WZA2 1011 aa8.79□□□□□ -1
LMBR1-204ENST00000415428 TAF1DQ9H5J8 278 aaPredicted RBP8.79□□□□□ -1
LMBR1-204ENST00000415428 CC2D2BQ6DHV5 1058 aa8.79□□□□□ -1
LMBR1-204ENST00000415428 TIMELESSQ9UNS1 1208 aa8.79□□□□□ -1
LMBR1-204ENST00000415428 MMP14P50281 582 aa8.79□□□□□ -1
LMBR1-204ENST00000415428 CYP19A1P11511 503 aaPredicted RBP8.78□□□□□ -1
LMBR1-204ENST00000415428 CRY2Q49AN0 593 aa8.78□□□□□ -1
LMBR1-204ENST00000415428 VEGFBP49765 207 aa8.78□□□□□ -1
LMBR1-204ENST00000415428 ZC3H15Q8WU90 426 aaKnown RBP8.78□□□□□ -1
LMBR1-204ENST00000415428 WDR33Q9C0J8 1336 aaKnown RBP8.78□□□□□ -1
LMBR1-204ENST00000415428 EIF5P55010 431 aaKnown RBP8.78□□□□□ -1
LMBR1-204ENST00000415428 PKN2Q16513 984 aaKnown RBP8.78□□□□□ -1
LMBR1-204ENST00000415428 USP50Q70EL3 339 aaPredicted RBP8.77□□□□□ -1.01
LMBR1-204ENST00000415428 CLEC4GQ6UXB4 293 aa8.77□□□□□ -1.01
LMBR1-204ENST00000415428 TTLL6Q8N841 843 aa8.77□□□□□ -1.01
LMBR1-204ENST00000415428 TMOD3Q9NYL9 352 aa8.77□□□□□ -1.01
LMBR1-204ENST00000415428 RNF181Q9P0P0 153 aa8.77□□□□□ -1.01
LMBR1-204ENST00000415428 A0A0G2JLW4 131 aa8.77□□□□□ -1.01
LMBR1-204ENST00000415428 UNCXA6NJT0 531 aa8.77□□□□□ -1.01
LMBR1-204ENST00000415428 HOXA10P31260 410 aaPredicted RBP8.77□□□□□ -1.01
LMBR1-204ENST00000415428 FCHSD2O94868 740 aa8.76□□□□□ -1.01
LMBR1-204ENST00000415428 FKBP4Q02790 459 aaKnown RBP eCLIP8.76□□□□□ -1.01
LMBR1-204ENST00000415428 ECE1P42892 770 aa8.76□□□□□ -1.01
LMBR1-204ENST00000415428 GPC2Q8N158 579 aa8.76□□□□□ -1.01
LMBR1-204ENST00000415428 GNPATO15228 680 aa8.75□□□□□ -1.01
LMBR1-204ENST00000415428 PDE6BP35913 854 aa8.75□□□□□ -1.01
LMBR1-204ENST00000415428 FMR1Q06787 632 aaKnown RBP eCLIP8.75□□□□□ -1.011e-7■■■■■ 29.7
LMBR1-204ENST00000415428 DLG5Q8TDM6 1919 aa8.75□□□□□ -1.01
LMBR1-204ENST00000415428 TNRC18O15417 2968 aaPredicted RBP8.75□□□□□ -1.01
LMBR1-204ENST00000415428 CDCA8Q53HL2 280 aa8.75□□□□□ -1.01
LMBR1-204ENST00000415428 CRKLP46109 303 aaKnown RBP8.75□□□□□ -1.01
LMBR1-204ENST00000415428 ARHGAP27Q6ZUM4 889 aa8.75□□□□□ -1.01
LMBR1-204ENST00000415428 MSL1Q68DK7 614 aa8.74□□□□□ -1.01
LMBR1-204ENST00000415428 EYA1Q99502 592 aa8.74□□□□□ -1.01
LMBR1-204ENST00000415428 ASAP1Q9ULH1 1129 aa8.74□□□□□ -1.01
LMBR1-204ENST00000415428 SLC12A5Q9H2X9 1139 aa8.74□□□□□ -1.01
LMBR1-204ENST00000415428 FAM155AB1AL88 458 aaPredicted RBP8.74□□□□□ -1.01
LMBR1-204ENST00000415428 ITGAEP38570 1179 aa8.74□□□□□ -1.01
LMBR1-204ENST00000415428 ATP6V1AP38606 617 aa8.74□□□□□ -1.01
LMBR1-204ENST00000415428 CNKSR1Q969H4 720 aa8.73□□□□□ -1.01
LMBR1-204ENST00000415428 TEX13AQ9BXU3 409 aaPredicted RBP8.73□□□□□ -1.01
LMBR1-204ENST00000415428 SRGNP10124 158 aa8.73□□□□□ -1.01
LMBR1-204ENST00000415428 FKBP8Q14318 412 aa8.73□□□□□ -1.01
LMBR1-204ENST00000415428 GPR153Q6NV75 609 aa8.73□□□□□ -1.01
LMBR1-204ENST00000415428 DDX54Q8TDD1 881 aaKnown RBP8.73□□□□□ -1.01
LMBR1-204ENST00000415428 AIDAQ96BJ3 306 aa8.73□□□□□ -1.01
LMBR1-204ENST00000415428 IL6STP40189 918 aaPredicted RBP8.73□□□□□ -1.01
LMBR1-204ENST00000415428 AKAP4Q5JQC9 854 aa8.73□□□□□ -1.01
LMBR1-204ENST00000415428 NFIXQ14938 502 aa8.72□□□□□ -1.01
LMBR1-204ENST00000415428 PRO3102Q9H379 93 aa8.72□□□□□ -1.01
LMBR1-204ENST00000415428 POLKQ9UBT6 870 aa8.72□□□□□ -1.01
LMBR1-204ENST00000415428 DPY19L2Q6NUT2 758 aa8.72□□□□□ -1.01
LMBR1-204ENST00000415428 RTKN2Q8IZC4 609 aa8.72□□□□□ -1.01
LMBR1-204ENST00000415428 CARD14Q9BXL6 1004 aa8.72□□□□□ -1.01
LMBR1-204ENST00000415428 BCS1LQ9Y276 419 aa8.71□□□□□ -1.02
LMBR1-204ENST00000415428 OTOFQ9HC10 1997 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms