RNA–Protein interactions for RNA: ENST00000414017.5

HLA-DMB-257, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

Gene HLA-DMB, Length 766 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-257ENST00000414017 PIP4K2AP48426 406 aaPredicted RBP13.53□□□□□ -0.24
HLA-DMB-257ENST00000414017 SLC15A2Q16348 729 aa13.53□□□□□ -0.24
HLA-DMB-257ENST00000414017 VSIG10Q8N0Z9 540 aa13.53□□□□□ -0.24
HLA-DMB-257ENST00000414017 CDCA7LQ96GN5 454 aa13.53□□□□□ -0.24
HLA-DMB-257ENST00000414017 MYH16Q9H6N6 1097 aa13.53□□□□□ -0.24
HLA-DMB-257ENST00000414017 USP16Q9Y5T5 823 aa13.53□□□□□ -0.24
HLA-DMB-257ENST00000414017 GIGYF1O75420 1035 aaPredicted RBP13.52□□□□□ -0.25
HLA-DMB-257ENST00000414017 CYP19A1P11511 503 aaPredicted RBP13.52□□□□□ -0.25
HLA-DMB-257ENST00000414017 ARXQ96QS3 562 aa13.52□□□□□ -0.25
HLA-DMB-257ENST00000414017 TEX13AQ9BXU3 409 aaPredicted RBP13.52□□□□□ -0.25
HLA-DMB-257ENST00000414017 FANCIQ9NVI1 1328 aa13.52□□□□□ -0.25
HLA-DMB-257ENST00000414017 TJP1Q07157 1748 aa13.52□□□□□ -0.25
HLA-DMB-257ENST00000414017 C4BP0C0L5 1744 aa13.51□□□□□ -0.25
HLA-DMB-257ENST00000414017 ZNF521Q96K83 1311 aa13.51□□□□□ -0.25
HLA-DMB-257ENST00000414017 A1BGP04217 495 aa13.51□□□□□ -0.25
HLA-DMB-257ENST00000414017 HMGB2P26583 209 aaKnown RBP13.51□□□□□ -0.25
HLA-DMB-257ENST00000414017 DUSP27Q5VZP5 1158 aa13.51□□□□□ -0.25
HLA-DMB-257ENST00000414017 AKT1S1Q96B36 256 aa13.51□□□□□ -0.25
HLA-DMB-257ENST00000414017 CCDC87Q9NVE4 849 aa13.51□□□□□ -0.25
HLA-DMB-257ENST00000414017 TAF1LQ8IZX4 1826 aa13.5□□□□□ -0.25
HLA-DMB-257ENST00000414017 E9PSI1 815 aa13.5□□□□□ -0.25
HLA-DMB-257ENST00000414017 EXOSC9Q06265 439 aaKnown RBP13.5□□□□□ -0.25
HLA-DMB-257ENST00000414017 NPM2Q86SE8 214 aaKnown RBP13.5□□□□□ -0.25
HLA-DMB-257ENST00000414017 C8orf58Q8NAV2 365 aa13.5□□□□□ -0.25
HLA-DMB-257ENST00000414017 ZBTB1Q9Y2K1 713 aa13.5□□□□□ -0.25
HLA-DMB-257ENST00000414017 RTCBQ9Y3I0 505 aaKnown RBP13.5□□□□□ -0.25
HLA-DMB-257ENST00000414017 CNTNAP4Q9C0A0 1308 aa13.49□□□□□ -0.25
HLA-DMB-257ENST00000414017 MYL6BP14649 208 aa13.49□□□□□ -0.25
HLA-DMB-257ENST00000414017 CACNB1Q02641 598 aaPredicted RBP13.49□□□□□ -0.25
HLA-DMB-257ENST00000414017 HDGFL1Q5TGJ6 251 aa13.49□□□□□ -0.25
HLA-DMB-257ENST00000414017 INTS5Q6P9B9 1019 aaKnown RBP13.49□□□□□ -0.25
HLA-DMB-257ENST00000414017 TSPYL6Q8N831 410 aa13.49□□□□□ -0.25
HLA-DMB-257ENST00000414017 COL5A3P25940 1745 aaPredicted RBP13.48□□□□□ -0.25
HLA-DMB-257ENST00000414017 ZBED9Q6R2W3 1325 aa13.48□□□□□ -0.25
HLA-DMB-257ENST00000414017 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.48□□□□□ -0.25
HLA-DMB-257ENST00000414017 TCERG1O14776 1098 aaKnown RBP13.48□□□□□ -0.25
HLA-DMB-257ENST00000414017 SLFN5Q08AF3 891 aa13.48□□□□□ -0.25
HLA-DMB-257ENST00000414017 TWISTNBQ3B726 338 aaPredicted RBP13.48□□□□□ -0.25
HLA-DMB-257ENST00000414017 RC3H1Q5TC82 1133 aaKnown RBP13.48□□□□□ -0.25
HLA-DMB-257ENST00000414017 AMIGO3Q86WK7 504 aa13.48□□□□□ -0.25
HLA-DMB-257ENST00000414017 PNPLA7Q6ZV29 1317 aa13.47□□□□□ -0.25
HLA-DMB-257ENST00000414017 RPS6KA4O75676 772 aa13.47□□□□□ -0.25
HLA-DMB-257ENST00000414017 ANXA1P04083 346 aa13.47□□□□□ -0.25
HLA-DMB-257ENST00000414017 TRAPPC3LQ5T215 181 aa13.47□□□□□ -0.25
HLA-DMB-257ENST00000414017 CNKSR2Q8WXI2 1034 aa13.47□□□□□ -0.25
HLA-DMB-257ENST00000414017 PDGFDQ9GZP0 370 aaPredicted RBP13.47□□□□□ -0.25
HLA-DMB-257ENST00000414017 ZNF831Q5JPB2 1677 aa13.47□□□□□ -0.25
HLA-DMB-257ENST00000414017 COL23A1Q86Y22 540 aaPredicted RBP13.46□□□□□ -0.25
HLA-DMB-257ENST00000414017 LAMB4A4D0S4 1761 aa13.45□□□□□ -0.26
HLA-DMB-257ENST00000414017 MYH14Q7Z406 1995 aaKnown RBP13.45□□□□□ -0.26
HLA-DMB-257ENST00000414017 DCAF8L1A6NGE4 600 aa13.45□□□□□ -0.26
HLA-DMB-257ENST00000414017 ZBTB7AO95365 584 aa13.45□□□□□ -0.26
HLA-DMB-257ENST00000414017 SSFA2P28290 1259 aa13.45□□□□□ -0.26
HLA-DMB-257ENST00000414017 RFC4P35249 363 aa13.45□□□□□ -0.26
HLA-DMB-257ENST00000414017 MSL1Q68DK7 614 aa13.45□□□□□ -0.26
HLA-DMB-257ENST00000414017 ARHGEF1Q92888 912 aaKnown RBP13.45□□□□□ -0.26
HLA-DMB-257ENST00000414017 CHPF2Q9P2E5 772 aa13.45□□□□□ -0.26
HLA-DMB-257ENST00000414017 COL15A1P39059 1388 aa13.45□□□□□ -0.26
HLA-DMB-257ENST00000414017 SOS1Q07889 1333 aaPredicted RBP13.44□□□□□ -0.26
HLA-DMB-257ENST00000414017 TUBGCP6Q96RT7 1819 aa13.44□□□□□ -0.26
HLA-DMB-257ENST00000414017 CICQ96RK0 1608 aaPredicted RBP13.44□□□□□ -0.26
HLA-DMB-257ENST00000414017 NBPF26B4DH59 902 aa13.44□□□□□ -0.26
HLA-DMB-257ENST00000414017 HOXB7P09629 217 aa13.44□□□□□ -0.26
HLA-DMB-257ENST00000414017 AIMP1Q12904 312 aaKnown RBP13.44□□□□□ -0.26
HLA-DMB-257ENST00000414017 PROSER3Q2NL68 480 aa13.44□□□□□ -0.26
HLA-DMB-257ENST00000414017 NBPF10Q6P3W6 841 aaKnown RBP13.44□□□□□ -0.26
HLA-DMB-257ENST00000414017 NBPF15Q8N660 670 aa13.44□□□□□ -0.26
HLA-DMB-257ENST00000414017 FLAD1Q8NFF5 587 aa13.44□□□□□ -0.26
HLA-DMB-257ENST00000414017 SRP68Q9UHB9 627 aaKnown RBP13.44□□□□□ -0.26
HLA-DMB-257ENST00000414017 TBC1D2BQ9UPU7 963 aa13.44□□□□□ -0.26
HLA-DMB-257ENST00000414017 ZPR1O75312 459 aa13.43□□□□□ -0.26
HLA-DMB-257ENST00000414017 IL6STP40189 918 aaPredicted RBP13.43□□□□□ -0.26
HLA-DMB-257ENST00000414017 CCDC30Q5VVM6 783 aa13.43□□□□□ -0.26
HLA-DMB-257ENST00000414017 UBR3Q6ZT12 1888 aa13.43□□□□□ -0.26
HLA-DMB-257ENST00000414017 STK31Q9BXU1 1019 aa13.43□□□□□ -0.26
HLA-DMB-257ENST00000414017 ATF5Q9Y2D1 282 aaPredicted RBP13.43□□□□□ -0.26
HLA-DMB-257ENST00000414017 A0A087WZG4 1122 aa13.42□□□□□ -0.26
HLA-DMB-257ENST00000414017 VAMP4O75379 141 aa13.42□□□□□ -0.26
HLA-DMB-257ENST00000414017 EIF5P55010 431 aaKnown RBP13.42□□□□□ -0.26
HLA-DMB-257ENST00000414017 DZIP3Q86Y13 1208 aaKnown RBP13.42□□□□□ -0.26
HLA-DMB-257ENST00000414017 USPL1Q5W0Q7 1092 aa13.41□□□□□ -0.26
HLA-DMB-257ENST00000414017 KIF6Q6ZMV9 814 aa13.41□□□□□ -0.26
HLA-DMB-257ENST00000414017 DDX21Q9NR30 783 aaKnown RBP eCLIP13.41□□□□□ -0.26
HLA-DMB-257ENST00000414017 DBF4Q9UBU7 674 aaPredicted RBP13.41□□□□□ -0.26
HLA-DMB-257ENST00000414017 ERBB4Q15303 1308 aa13.4□□□□□ -0.26
HLA-DMB-257ENST00000414017 PDIA6Q15084 440 aa13.4□□□□□ -0.26
HLA-DMB-257ENST00000414017 TTLL7Q6ZT98 887 aa13.4□□□□□ -0.26
HLA-DMB-257ENST00000414017 TRMT2AQ8IZ69 625 aaKnown RBP13.4□□□□□ -0.26
HLA-DMB-257ENST00000414017 XAGE3Q8WTP9 111 aa13.4□□□□□ -0.26
HLA-DMB-257ENST00000414017 CHMP4AQ9BY43 222 aa13.4□□□□□ -0.26
HLA-DMB-257ENST00000414017 ZBTB3Q9H5J0 574 aa13.4□□□□□ -0.26
HLA-DMB-257ENST00000414017 RNF216Q9NWF9 866 aaPredicted RBP13.4□□□□□ -0.26
HLA-DMB-257ENST00000414017 SLC4A2P04920 1241 aa13.39□□□□□ -0.27
HLA-DMB-257ENST00000414017 BICDL1Q6ZP65 573 aa13.39□□□□□ -0.27
HLA-DMB-257ENST00000414017 COPS6Q7L5N1 327 aa13.39□□□□□ -0.27
HLA-DMB-257ENST00000414017 BCL2L13Q9BXK5 485 aa13.39□□□□□ -0.27
HLA-DMB-257ENST00000414017 PHAXQ9H814 394 aaKnown RBP13.39□□□□□ -0.27
HLA-DMB-257ENST00000414017 HYPKQ9NX55 129 aa13.39□□□□□ -0.27
HLA-DMB-257ENST00000414017 NARFQ9UHQ1 456 aa13.39□□□□□ -0.27
HLA-DMB-257ENST00000414017 USP42Q9H9J4 1324 aaKnown RBP13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms