RNA–Protein interactions for RNA: ENST00000413642.7

VEGFA-207, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,197 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-207ENST00000413642 C4AP0C0L4 1744 aa34.89■■■■□ 3.18
VEGFA-207ENST00000413642 STARD3NLO95772 234 aa34.88■■■■□ 3.17
VEGFA-207ENST00000413642 USPL1Q5W0Q7 1092 aa34.88■■■■□ 3.17
VEGFA-207ENST00000413642 THUMPD2Q9BTF0 503 aaKnown RBP34.88■■■■□ 3.17
VEGFA-207ENST00000413642 MIS18AQ9NYP9 233 aa34.88■■■■□ 3.17
VEGFA-207ENST00000413642 PRKRIP1Q9H875 184 aaPredicted RBP34.87■■■■□ 3.17
VEGFA-207ENST00000413642 MAPK8IP3Q9UPT6 1336 aa34.86■■■■□ 3.17
VEGFA-207ENST00000413642 PRAMEF22A3QJZ6 481 aa34.86■■■■□ 3.17
VEGFA-207ENST00000413642 COL15A1P39059 1388 aa34.86■■■■□ 3.17
VEGFA-207ENST00000413642 PNNQ9H307 717 aaKnown RBP34.85■■■■□ 3.17
VEGFA-207ENST00000413642 ZPR1O75312 459 aa34.84■■■■□ 3.17
VEGFA-207ENST00000413642 DDR1Q08345 913 aa34.84■■■■□ 3.17
VEGFA-207ENST00000413642 TAF7Q15545 349 aaPredicted RBP34.84■■■■□ 3.17
VEGFA-207ENST00000413642 TEX13AQ9BXU3 409 aaPredicted RBP34.84■■■■□ 3.17
VEGFA-207ENST00000413642 PARP3Q9Y6F1 533 aa34.84■■■■□ 3.17
VEGFA-207ENST00000413642 A1BGP04217 495 aa34.83■■■■□ 3.17
VEGFA-207ENST00000413642 NARFQ9UHQ1 456 aa34.83■■■■□ 3.17
VEGFA-207ENST00000413642 USP16Q9Y5T5 823 aa34.83■■■■□ 3.17
VEGFA-207ENST00000413642 EIF5P55010 431 aaKnown RBP34.82■■■■□ 3.16
VEGFA-207ENST00000413642 BCL2L12Q9HB09 334 aa34.81■■■■□ 3.16
VEGFA-207ENST00000413642 CCDC146Q8IYE0 955 aa34.8■■■■□ 3.16
VEGFA-207ENST00000413642 ZNF330Q9Y3S2 320 aaPredicted RBP34.8■■■■□ 3.16
VEGFA-207ENST00000413642 TM4SF1P30408 202 aa34.79■■■■□ 3.16
VEGFA-207ENST00000413642 PIP4K2AP48426 406 aaPredicted RBP34.78■■■■□ 3.16
VEGFA-207ENST00000413642 C10orf71Q711Q0 1435 aa34.77■■■■□ 3.16
VEGFA-207ENST00000413642 SNRPA1P09661 255 aaKnown RBP34.76■■■■□ 3.16
VEGFA-207ENST00000413642 RIPK4P57078 832 aa34.76■■■■□ 3.16
VEGFA-207ENST00000413642 A0A0G2JLW4 131 aa34.75■■■■□ 3.15
VEGFA-207ENST00000413642 POLRMTO00411 1230 aaKnown RBP34.75■■■■□ 3.15
VEGFA-207ENST00000413642 NFIXQ14938 502 aa34.75■■■■□ 3.15
VEGFA-207ENST00000413642 TBC1D2BQ9UPU7 963 aa34.75■■■■□ 3.15
VEGFA-207ENST00000413642 RRP7AQ9Y3A4 280 aaKnown RBP34.75■■■■□ 3.15
VEGFA-207ENST00000413642 PXDNLA1KZ92 1463 aa34.74■■■■□ 3.15
VEGFA-207ENST00000413642 GRIN3BO60391 1043 aa34.74■■■■□ 3.15
VEGFA-207ENST00000413642 IL6STP40189 918 aaPredicted RBP34.74■■■■□ 3.15
VEGFA-207ENST00000413642 ADAMTS8Q9UP79 889 aa34.74■■■■□ 3.15
VEGFA-207ENST00000413642 TMPOP42166 694 aaKnown RBP34.73■■■■□ 3.15
VEGFA-207ENST00000413642 WDR43Q15061 677 aaKnown RBP eCLIP34.73■■■■□ 3.158e-10■□□□□ 9.2
VEGFA-207ENST00000413642 A0A087WZG4 1122 aa34.72■■■■□ 3.15
VEGFA-207ENST00000413642 DPEP1P16444 411 aa34.72■■■■□ 3.15
VEGFA-207ENST00000413642 DLG5Q8TDM6 1919 aa34.72■■■■□ 3.15
VEGFA-207ENST00000413642 ZNF316A6NFI3 1004 aaPredicted RBP34.71■■■■□ 3.15
VEGFA-207ENST00000413642 TGFB2P61812 414 aa34.71■■■■□ 3.15
VEGFA-207ENST00000413642 BICDL1Q6ZP65 573 aa34.7■■■■□ 3.15
VEGFA-207ENST00000413642 PNISRQ8TF01 805 aaKnown RBP34.7■■■■□ 3.15
VEGFA-207ENST00000413642 NEUROD2Q15784 382 aa34.69■■■■□ 3.14
VEGFA-207ENST00000413642 NBPF26B4DH59 902 aa34.67■■■■□ 3.14
VEGFA-207ENST00000413642 EIF4A1P60842 406 aaKnown RBP34.67■■■■□ 3.14
VEGFA-207ENST00000413642 NBPF10Q6P3W6 841 aaKnown RBP34.67■■■■□ 3.14
VEGFA-207ENST00000413642 NBPF15Q8N660 670 aa34.67■■■■□ 3.14
VEGFA-207ENST00000413642 RUNDC1Q96C34 613 aa34.67■■■■□ 3.14
VEGFA-207ENST00000413642 KIAA1551Q9HCM1 1747 aa34.65■■■■□ 3.14
VEGFA-207ENST00000413642 SERPINB2P05120 415 aa34.65■■■■□ 3.14
VEGFA-207ENST00000413642 TBC1D9BQ66K14 1250 aa34.65■■■■□ 3.14
VEGFA-207ENST00000413642 ZNF784Q8NCA9 323 aaPredicted RBP34.65■■■■□ 3.14
VEGFA-207ENST00000413642 CAMTA2O94983 1202 aa34.64■■■■□ 3.14
VEGFA-207ENST00000413642 KCNA3P22001 575 aa34.64■■■■□ 3.14
VEGFA-207ENST00000413642 KIF13BQ9NQT8 1826 aa34.64■■■■□ 3.14
VEGFA-207ENST00000413642 GIGYF1O75420 1035 aaPredicted RBP34.63■■■■□ 3.13
VEGFA-207ENST00000413642 CCDC184Q52MB2 194 aa34.63■■■■□ 3.13
VEGFA-207ENST00000413642 NPM2Q86SE8 214 aaKnown RBP34.63■■■■□ 3.13
VEGFA-207ENST00000413642 DZIP3Q86Y13 1208 aaKnown RBP34.63■■■■□ 3.13
VEGFA-207ENST00000413642 CHRNA5P30532 468 aa34.62■■■■□ 3.13
VEGFA-207ENST00000413642 BCS1LQ9Y276 419 aa34.62■■■■□ 3.13
VEGFA-207ENST00000413642 UTRNP46939 3433 aa34.61■■■■□ 3.13
VEGFA-207ENST00000413642 TSPYL4Q9UJ04 414 aa34.61■■■■□ 3.13
VEGFA-207ENST00000413642 N4BP2Q86UW6 1770 aaPredicted RBP34.6■■■■□ 3.13
VEGFA-207ENST00000413642 TRIM35Q9UPQ4 493 aa34.6■■■■□ 3.13
VEGFA-207ENST00000413642 LMOD3Q0VAK6 560 aa34.59■■■■□ 3.13
VEGFA-207ENST00000413642 KDM3BQ7LBC6 1761 aa34.59■■■■□ 3.13
VEGFA-207ENST00000413642 CHD4Q14839 1912 aa34.55■■■■□ 3.12
VEGFA-207ENST00000413642 CARMIL3Q8ND23 1372 aa34.55■■■■□ 3.12
VEGFA-207ENST00000413642 CCDC24Q8N4L8 307 aa34.55■■■■□ 3.12
VEGFA-207ENST00000413642 NGEFQ8N5V2 710 aa34.54■■■■□ 3.12
VEGFA-207ENST00000413642 PIM2Q9P1W9 311 aa34.54■■■■□ 3.12
VEGFA-207ENST00000413642 SCN7AQ01118 1682 aa34.54■■■■□ 3.12
VEGFA-207ENST00000413642 GOLGB1Q14789 3259 aaKnown RBP34.53■■■■□ 3.12
VEGFA-207ENST00000413642 APAF1O14727 1248 aa34.5■■■■□ 3.11
VEGFA-207ENST00000413642 SETDB2Q96T68 719 aa34.5■■■■□ 3.11
VEGFA-207ENST00000413642 LAS1LQ9Y4W2 734 aaKnown RBP34.5■■■■□ 3.11
VEGFA-207ENST00000413642 NRXN2Q9P2S2 1712 aa34.5■■■■□ 3.11
VEGFA-207ENST00000413642 AFDNP55196 1824 aaKnown RBP34.49■■■■□ 3.11
VEGFA-207ENST00000413642 PRR5LQ6MZQ0 368 aa34.49■■■■□ 3.11
VEGFA-207ENST00000413642 BABAM1Q9NWV8 329 aa34.49■■■■□ 3.11
VEGFA-207ENST00000413642 MYL6BP14649 208 aa34.48■■■■□ 3.11
VEGFA-207ENST00000413642 DALRD3Q5D0E6 543 aaKnown RBP34.48■■■■□ 3.11
VEGFA-207ENST00000413642 ARHGAP27Q6ZUM4 889 aa34.48■■■■□ 3.11
VEGFA-207ENST00000413642 CHL1O00533 1208 aa34.47■■■■□ 3.11
VEGFA-207ENST00000413642 HLFQ16534 295 aa34.47■■■■□ 3.11
VEGFA-207ENST00000413642 KRT24Q2M2I5 525 aa34.47■■■■□ 3.11
VEGFA-207ENST00000413642 EIF2S2P20042 333 aaKnown RBP34.46■■■■□ 3.11
VEGFA-207ENST00000413642 C2CD5Q86YS7 1000 aa34.46■■■■□ 3.11
VEGFA-207ENST00000413642 LAMB4A4D0S4 1761 aa34.45■■■■□ 3.11
VEGFA-207ENST00000413642 CLEC4GQ6UXB4 293 aa34.45■■■■□ 3.11
VEGFA-207ENST00000413642 TTLL7Q6ZT98 887 aa34.45■■■■□ 3.11
VEGFA-207ENST00000413642 SENP3-EIF4A1A0A087X0R7 540 aa34.43■■■■□ 3.1
VEGFA-207ENST00000413642 ZNF652Q9Y2D9 606 aa34.43■■■■□ 3.1
VEGFA-207ENST00000413642 BCORQ6W2J9 1755 aa34.43■■■■□ 3.1
VEGFA-207ENST00000413642 ANP32CO43423 234 aa34.42■■■■□ 3.1
VEGFA-207ENST00000413642 CNBD1Q8NA66 436 aa34.42■■■■□ 3.1
Retrieved 100 of 20,778 RNA–protein pairs in 138.5 ms