RNA–Protein interactions for RNA: ENST00000413184.6

CPSF7-203, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-203ENST00000413184 FBXO46Q6PJ61 603 aaPredicted RBP10.67□□□□□ -0.7
CPSF7-203ENST00000413184 SMARCC1Q92922 1105 aaPredicted RBP10.67□□□□□ -0.7
CPSF7-203ENST00000413184 PAPPA2Q9BXP8 1791 aa10.67□□□□□ -0.7
CPSF7-203ENST00000413184 LRCH3Q96II8 777 aa10.66□□□□□ -0.7
CPSF7-203ENST00000413184 KIAA0100Q14667 2235 aaKnown RBP10.66□□□□□ -0.7
CPSF7-203ENST00000413184 SCN11AQ9UI33 1791 aa10.65□□□□□ -0.7
CPSF7-203ENST00000413184 RNF123Q5XPI4 1314 aa10.65□□□□□ -0.7
CPSF7-203ENST00000413184 TMEM265A0A087WTH1 108 aa10.65□□□□□ -0.7
CPSF7-203ENST00000413184 CELF2O95319 508 aaKnown RBP10.65□□□□□ -0.7
CPSF7-203ENST00000413184 MPRIPQ6WCQ1 1025 aa10.65□□□□□ -0.7
CPSF7-203ENST00000413184 CDK19Q9BWU1 502 aa10.65□□□□□ -0.7
CPSF7-203ENST00000413184 RTCBQ9Y3I0 505 aaKnown RBP10.65□□□□□ -0.7
CPSF7-203ENST00000413184 SOX1O00570 391 aaPredicted RBP10.64□□□□□ -0.71
CPSF7-203ENST00000413184 PPEF1O14829 653 aaPredicted RBP10.64□□□□□ -0.71
CPSF7-203ENST00000413184 RFC4P35249 363 aa10.64□□□□□ -0.71
CPSF7-203ENST00000413184 BICDL1Q6ZP65 573 aa10.64□□□□□ -0.71
CPSF7-203ENST00000413184 SYNE4Q8N205 404 aa10.64□□□□□ -0.71
CPSF7-203ENST00000413184 DEFB123Q8N688 67 aa10.64□□□□□ -0.71
CPSF7-203ENST00000413184 TAOK3Q9H2K8 898 aa10.64□□□□□ -0.71
CPSF7-203ENST00000413184 TTC28Q96AY4 2481 aa10.63□□□□□ -0.71
CPSF7-203ENST00000413184 INTS3Q68E01 1043 aaKnown RBP10.63□□□□□ -0.71
CPSF7-203ENST00000413184 ZCRB1Q8TBF4 217 aaKnown RBP10.63□□□□□ -0.71
CPSF7-203ENST00000413184 ANKRD24Q8TF21 1146 aa10.63□□□□□ -0.71
CPSF7-203ENST00000413184 FER1L6Q2WGJ9 1857 aa10.63□□□□□ -0.71
CPSF7-203ENST00000413184 RBBP6Q7Z6E9 1792 aaKnown RBP10.62□□□□□ -0.71
CPSF7-203ENST00000413184 DLEC1Q9Y238 1755 aa10.62□□□□□ -0.71
CPSF7-203ENST00000413184 LAMA3Q16787 3333 aa10.62□□□□□ -0.71
CPSF7-203ENST00000413184 EN2P19622 333 aaPredicted RBP10.62□□□□□ -0.71
CPSF7-203ENST00000413184 ARHGEF1Q92888 912 aaKnown RBP10.62□□□□□ -0.71
CPSF7-203ENST00000413184 ROCK1Q13464 1354 aa10.62□□□□□ -0.71
CPSF7-203ENST00000413184 LOC102724428A0A0B4J2F2 783 aa10.61□□□□□ -0.71
CPSF7-203ENST00000413184 SIK1P57059 783 aa10.61□□□□□ -0.71
CPSF7-203ENST00000413184 DDR1Q08345 913 aa10.61□□□□□ -0.71
CPSF7-203ENST00000413184 ZNF541Q9H0D2 1346 aa10.6□□□□□ -0.71
CPSF7-203ENST00000413184 C21orf2O43822 256 aa10.6□□□□□ -0.71
CPSF7-203ENST00000413184 KIF23Q02241 960 aaPredicted RBP10.6□□□□□ -0.71
CPSF7-203ENST00000413184 MAP3K12Q12852 859 aa10.6□□□□□ -0.71
CPSF7-203ENST00000413184 ZNF408Q9H9D4 720 aa10.6□□□□□ -0.71
CPSF7-203ENST00000413184 INSRP06213 1382 aa10.6□□□□□ -0.71
CPSF7-203ENST00000413184 SYNGAP1Q96PV0 1343 aa10.59□□□□□ -0.71
CPSF7-203ENST00000413184 LTBP3Q9NS15 1303 aa10.59□□□□□ -0.71
CPSF7-203ENST00000413184 PIEZO1Q92508 2521 aa10.59□□□□□ -0.71
CPSF7-203ENST00000413184 ADRA2BP18089 450 aa10.59□□□□□ -0.71
CPSF7-203ENST00000413184 ATP6V1AP38606 617 aa10.59□□□□□ -0.71
CPSF7-203ENST00000413184 Q7L0L9 218 aa10.59□□□□□ -0.71
CPSF7-203ENST00000413184 ZNF296Q8WUU4 475 aaPredicted RBP10.59□□□□□ -0.71
CPSF7-203ENST00000413184 NFAT5O94916 1531 aa10.58□□□□□ -0.72
CPSF7-203ENST00000413184 ITPK1Q13572 414 aa10.58□□□□□ -0.72
CPSF7-203ENST00000413184 C2CD5Q86YS7 1000 aa10.58□□□□□ -0.72
CPSF7-203ENST00000413184 MAP2P11137 1827 aaKnown RBP10.58□□□□□ -0.72
CPSF7-203ENST00000413184 HUNKP57058 714 aa10.57□□□□□ -0.72
CPSF7-203ENST00000413184 MUC3AQ02505 3323 aa10.57□□□□□ -0.72
CPSF7-203ENST00000413184 A0A1W2PPC1 479 aa10.56□□□□□ -0.72
CPSF7-203ENST00000413184 H0YIN7 160 aa10.56□□□□□ -0.72
CPSF7-203ENST00000413184 LMOD1P29536 600 aaPredicted RBP10.56□□□□□ -0.72
CPSF7-203ENST00000413184 FKBP8Q14318 412 aa10.56□□□□□ -0.72
CPSF7-203ENST00000413184 SYMPKQ92797 1274 aaKnown RBP10.56□□□□□ -0.72
CPSF7-203ENST00000413184 PRO3102Q9H379 93 aa10.56□□□□□ -0.72
CPSF7-203ENST00000413184 CENPFP49454 3210 aa10.56□□□□□ -0.72
CPSF7-203ENST00000413184 POLRMTO00411 1230 aaKnown RBP10.55□□□□□ -0.72
CPSF7-203ENST00000413184 GPR153Q6NV75 609 aa10.55□□□□□ -0.72
CPSF7-203ENST00000413184 MTMR10Q9NXD2 777 aa10.55□□□□□ -0.72
CPSF7-203ENST00000413184 USP31Q70CQ4 1352 aa10.54□□□□□ -0.72
CPSF7-203ENST00000413184 ITGB4P16144 1822 aa10.54□□□□□ -0.72
CPSF7-203ENST00000413184 FAM155AB1AL88 458 aaPredicted RBP10.54□□□□□ -0.72
CPSF7-203ENST00000413184 TNFRSF10AO00220 468 aa10.54□□□□□ -0.72
CPSF7-203ENST00000413184 ADGRB1O14514 1584 aa10.54□□□□□ -0.72
CPSF7-203ENST00000413184 SMG6Q86US8 1419 aaKnown RBP10.54□□□□□ -0.72
CPSF7-203ENST00000413184 DPF3Q92784 378 aa10.54□□□□□ -0.72
CPSF7-203ENST00000413184 ZNF622Q969S3 477 aaKnown RBP eCLIP10.54□□□□□ -0.722e-6■□□□□ 9.3
CPSF7-203ENST00000413184 LTN1O94822 1766 aa10.53□□□□□ -0.72
CPSF7-203ENST00000413184 RGMBQ6NW40 437 aa10.53□□□□□ -0.72
CPSF7-203ENST00000413184 PPARGC1BQ86YN6 1023 aaKnown RBP10.53□□□□□ -0.72
CPSF7-203ENST00000413184 CCDC102AQ96A19 550 aa10.53□□□□□ -0.72
CPSF7-203ENST00000413184 CSRNP1Q96S65 589 aa10.53□□□□□ -0.72
CPSF7-203ENST00000413184 ALYREFQ86V81 257 aaKnown RBP10.52□□□□□ -0.73
CPSF7-203ENST00000413184 GPC2Q8N158 579 aa10.52□□□□□ -0.73
CPSF7-203ENST00000413184 LTV1Q96GA3 475 aaPredicted RBP10.52□□□□□ -0.73
CPSF7-203ENST00000413184 TMEM106CQ9BVX2 250 aa10.52□□□□□ -0.73
CPSF7-203ENST00000413184 SRP68Q9UHB9 627 aaKnown RBP10.52□□□□□ -0.73
CPSF7-203ENST00000413184 FAM208AQ9UK61 1670 aaKnown RBP10.51□□□□□ -0.73
CPSF7-203ENST00000413184 HTTP42858 3142 aa10.51□□□□□ -0.73
CPSF7-203ENST00000413184 SRPK2P78362 688 aaKnown RBP10.51□□□□□ -0.73
CPSF7-203ENST00000413184 USP50Q70EL3 339 aaPredicted RBP10.51□□□□□ -0.73
CPSF7-203ENST00000413184 PIGBQ92521 554 aa10.51□□□□□ -0.73
CPSF7-203ENST00000413184 GLIS2Q9BZE0 524 aaPredicted RBP10.51□□□□□ -0.73
CPSF7-203ENST00000413184 CACNA1GO43497 2377 aa10.5□□□□□ -0.73
CPSF7-203ENST00000413184 AFDNP55196 1824 aaKnown RBP10.5□□□□□ -0.73
CPSF7-203ENST00000413184 RPS6KA4O75676 772 aa10.5□□□□□ -0.73
CPSF7-203ENST00000413184 TBC1D8O95759 1140 aa10.5□□□□□ -0.73
CPSF7-203ENST00000413184 ZNF157P51786 506 aaPredicted RBP10.5□□□□□ -0.73
CPSF7-203ENST00000413184 RPTORQ8N122 1335 aa10.5□□□□□ -0.73
CPSF7-203ENST00000413184 LAMA2P24043 3122 aaKnown RBP10.49□□□□□ -0.73
CPSF7-203ENST00000413184 TM4SF1P30408 202 aa10.49□□□□□ -0.73
CPSF7-203ENST00000413184 EPS15P42566 896 aa10.49□□□□□ -0.73
CPSF7-203ENST00000413184 GJA3Q9Y6H8 435 aa10.49□□□□□ -0.73
CPSF7-203ENST00000413184 TTC21AQ8NDW8 1320 aa10.49□□□□□ -0.73
CPSF7-203ENST00000413184 USP42Q9H9J4 1324 aaKnown RBP10.49□□□□□ -0.73
CPSF7-203ENST00000413184 PKD1L2Q7Z442 2459 aa10.49□□□□□ -0.73
CPSF7-203ENST00000413184 GPR25O00155 361 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms