RNA–Protein interactions for RNA: ENST00000413002.5

SSB-203, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 3

Gene SSB, Length 674 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-203ENST00000413002 COL5A3P25940 1745 aaPredicted RBP17.35■□□□□ 0.37
SSB-203ENST00000413002 CANXP27824 592 aaKnown RBP17.34■□□□□ 0.37
SSB-203ENST00000413002 RFC4P35249 363 aa17.34■□□□□ 0.37
SSB-203ENST00000413002 MYH14Q7Z406 1995 aaKnown RBP17.34■□□□□ 0.37
SSB-203ENST00000413002 VSIG10Q8N0Z9 540 aa17.34■□□□□ 0.37
SSB-203ENST00000413002 RUNDC1Q96C34 613 aa17.34■□□□□ 0.37
SSB-203ENST00000413002 HEG1Q9ULI3 1381 aa17.34■□□□□ 0.37
SSB-203ENST00000413002 SIPA1L3O60292 1781 aaPredicted RBP17.33■□□□□ 0.37
SSB-203ENST00000413002 HOXD11P31277 338 aaPredicted RBP17.33■□□□□ 0.36
SSB-203ENST00000413002 PIP4K2AP48426 406 aaPredicted RBP17.32■□□□□ 0.36
SSB-203ENST00000413002 USP16Q9Y5T5 823 aa17.32■□□□□ 0.36
SSB-203ENST00000413002 UBR2Q8IWV8 1755 aa17.31■□□□□ 0.36
SSB-203ENST00000413002 SOS1Q07889 1333 aaPredicted RBP17.31■□□□□ 0.36
SSB-203ENST00000413002 STARD3NLO95772 234 aa17.31■□□□□ 0.36
SSB-203ENST00000413002 A1BGP04217 495 aa17.31■□□□□ 0.36
SSB-203ENST00000413002 MRS2Q9HD23 443 aa17.31■□□□□ 0.36
SSB-203ENST00000413002 ZNF330Q9Y3S2 320 aaPredicted RBP17.31■□□□□ 0.36
SSB-203ENST00000413002 DLG5Q8TDM6 1919 aa17.31■□□□□ 0.36
SSB-203ENST00000413002 MMP10P09238 476 aa17.3■□□□□ 0.36
SSB-203ENST00000413002 GYS1P13807 737 aa17.3■□□□□ 0.36
SSB-203ENST00000413002 NLGN2Q8NFZ4 835 aa17.3■□□□□ 0.36
SSB-203ENST00000413002 APAF1O14727 1248 aa17.29■□□□□ 0.36
SSB-203ENST00000413002 TRIM35Q9UPQ4 493 aa17.29■□□□□ 0.36
SSB-203ENST00000413002 CICQ96RK0 1608 aaPredicted RBP17.29■□□□□ 0.36
SSB-203ENST00000413002 FKBP8Q14318 412 aa17.28■□□□□ 0.36
SSB-203ENST00000413002 USPL1Q5W0Q7 1092 aa17.28■□□□□ 0.36
SSB-203ENST00000413002 CNKSR2Q8WXI2 1034 aa17.28■□□□□ 0.36
SSB-203ENST00000413002 TEX13AQ9BXU3 409 aaPredicted RBP17.28■□□□□ 0.36
SSB-203ENST00000413002 COL24A1Q17RW2 1714 aa17.27■□□□□ 0.36
SSB-203ENST00000413002 USP42Q9H9J4 1324 aaKnown RBP17.27■□□□□ 0.36
SSB-203ENST00000413002 SNRPA1P09661 255 aaKnown RBP17.27■□□□□ 0.36
SSB-203ENST00000413002 NLGN1Q8N2Q7 840 aa17.27■□□□□ 0.36
SSB-203ENST00000413002 PNISRQ8TF01 805 aaKnown RBP17.27■□□□□ 0.36
SSB-203ENST00000413002 COL15A1P39059 1388 aa17.27■□□□□ 0.35
SSB-203ENST00000413002 ZPR1O75312 459 aa17.26■□□□□ 0.35
SSB-203ENST00000413002 EIF5P55010 431 aaKnown RBP17.26■□□□□ 0.35
SSB-203ENST00000413002 EIF4A1P60842 406 aaKnown RBP17.26■□□□□ 0.35
SSB-203ENST00000413002 LMOD3Q0VAK6 560 aa17.26■□□□□ 0.35
SSB-203ENST00000413002 TSPYL4Q9UJ04 414 aa17.26■□□□□ 0.35
SSB-203ENST00000413002 LAS1LQ9Y4W2 734 aaKnown RBP17.26■□□□□ 0.35
SSB-203ENST00000413002 PELP1Q8IZL8 1130 aaKnown RBP17.25■□□□□ 0.35
SSB-203ENST00000413002 WWC3Q9ULE0 1092 aa17.25■□□□□ 0.35
SSB-203ENST00000413002 TBC1D2BQ9UPU7 963 aa17.25■□□□□ 0.35
SSB-203ENST00000413002 C4AP0C0L4 1744 aa17.24■□□□□ 0.35
SSB-203ENST00000413002 BCL2L12Q9HB09 334 aa17.24■□□□□ 0.35
SSB-203ENST00000413002 NARFQ9UHQ1 456 aa17.24■□□□□ 0.35
SSB-203ENST00000413002 NBPF26B4DH59 902 aa17.23■□□□□ 0.35
SSB-203ENST00000413002 GIGYF1O75420 1035 aaPredicted RBP17.23■□□□□ 0.35
SSB-203ENST00000413002 DDR1Q08345 913 aa17.23■□□□□ 0.35
SSB-203ENST00000413002 NBPF10Q6P3W6 841 aaKnown RBP17.23■□□□□ 0.35
SSB-203ENST00000413002 NBPF15Q8N660 670 aa17.23■□□□□ 0.35
SSB-203ENST00000413002 IL6STP40189 918 aaPredicted RBP17.22■□□□□ 0.35
SSB-203ENST00000413002 BICDL1Q6ZP65 573 aa17.22■□□□□ 0.35
SSB-203ENST00000413002 PARP3Q9Y6F1 533 aa17.22■□□□□ 0.35
SSB-203ENST00000413002 KRT24Q2M2I5 525 aa17.21■□□□□ 0.35
SSB-203ENST00000413002 NGEFQ8N5V2 710 aa17.21■□□□□ 0.35
SSB-203ENST00000413002 CD2APQ9Y5K6 639 aa17.21■□□□□ 0.35
SSB-203ENST00000413002 TM4SF1P30408 202 aa17.2■□□□□ 0.34
SSB-203ENST00000413002 NFIXQ14938 502 aa17.2■□□□□ 0.34
SSB-203ENST00000413002 GPR162Q16538 588 aa17.2■□□□□ 0.34
SSB-203ENST00000413002 NPM2Q86SE8 214 aaKnown RBP17.2■□□□□ 0.34
SSB-203ENST00000413002 FAM9BQ8IZU0 186 aa17.2■□□□□ 0.34
SSB-203ENST00000413002 KDM3BQ7LBC6 1761 aa17.2■□□□□ 0.34
SSB-203ENST00000413002 A0A087WZG4 1122 aa17.19■□□□□ 0.34
SSB-203ENST00000413002 CHL1O00533 1208 aa17.19■□□□□ 0.34
SSB-203ENST00000413002 EIF2S2P20042 333 aaKnown RBP17.19■□□□□ 0.34
SSB-203ENST00000413002 DZIP3Q86Y13 1208 aaKnown RBP17.19■□□□□ 0.34
SSB-203ENST00000413002 NECTIN2Q92692 538 aa17.19■□□□□ 0.34
SSB-203ENST00000413002 POLRMTO00411 1230 aaKnown RBP17.18■□□□□ 0.34
SSB-203ENST00000413002 MYL6BP14649 208 aa17.18■□□□□ 0.34
SSB-203ENST00000413002 SALL2Q9Y467 1007 aaPredicted RBP17.18■□□□□ 0.34
SSB-203ENST00000413002 CAMTA2O94983 1202 aa17.17■□□□□ 0.34
SSB-203ENST00000413002 TBC1D9BQ66K14 1250 aa17.17■□□□□ 0.34
SSB-203ENST00000413002 RNF216Q9NWF9 866 aaPredicted RBP17.17■□□□□ 0.34
SSB-203ENST00000413002 A0A0G2JLW4 131 aa17.16■□□□□ 0.34
SSB-203ENST00000413002 YBX3P16989 372 aaKnown RBP eCLIP17.16■□□□□ 0.34
SSB-203ENST00000413002 MBIPQ9NS73 344 aa17.16■□□□□ 0.34
SSB-203ENST00000413002 BABAM1Q9NWV8 329 aa17.16■□□□□ 0.34
SSB-203ENST00000413002 ANXA1P04083 346 aa17.15■□□□□ 0.34
SSB-203ENST00000413002 SERPINB2P05120 415 aa17.15■□□□□ 0.34
SSB-203ENST00000413002 CCDC24Q8N4L8 307 aa17.15■□□□□ 0.34
SSB-203ENST00000413002 CFAP44Q96MT7 982 aa17.15■□□□□ 0.34
SSB-203ENST00000413002 PROSER3Q2NL68 480 aa17.14■□□□□ 0.33
SSB-203ENST00000413002 C10orf71Q711Q0 1435 aa17.13■□□□□ 0.33
SSB-203ENST00000413002 ZNF853P0CG23 659 aa17.13■□□□□ 0.33
SSB-203ENST00000413002 DPEP1P16444 411 aa17.13■□□□□ 0.33
SSB-203ENST00000413002 TTLL7Q6ZT98 887 aa17.13■□□□□ 0.33
SSB-203ENST00000413002 ELL2O00472 640 aaPredicted RBP17.12■□□□□ 0.33
SSB-203ENST00000413002 HLFQ16534 295 aa17.12■□□□□ 0.33
SSB-203ENST00000413002 RNF39Q9H2S5 420 aa17.12■□□□□ 0.33
SSB-203ENST00000413002 PXDNLA1KZ92 1463 aa17.12■□□□□ 0.33
SSB-203ENST00000413002 GOLGB1Q14789 3259 aaKnown RBP17.11■□□□□ 0.33
SSB-203ENST00000413002 CHRNA5P30532 468 aa17.11■□□□□ 0.33
SSB-203ENST00000413002 GNAI1P63096 354 aa17.11■□□□□ 0.33
SSB-203ENST00000413002 PDIA6Q15084 440 aa17.11■□□□□ 0.33
SSB-203ENST00000413002 WWC1Q8IX03 1113 aa17.11■□□□□ 0.33
SSB-203ENST00000413002 IFT57Q9NWB7 429 aa17.11■□□□□ 0.33
SSB-203ENST00000413002 LAMB4A4D0S4 1761 aa17.1■□□□□ 0.33
SSB-203ENST00000413002 FAM177BA6PVY3 158 aa17.1■□□□□ 0.33
SSB-203ENST00000413002 TGFB2P61812 414 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms