RNA–Protein interactions for RNA: ENST00000412615.6

TRAFD1-202, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRAFD1, Length 2,697 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-202ENST00000412615 CHMLP26374 656 aa14.04□□□□□ -0.16
TRAFD1-202ENST00000412615 HSP90AB4PQ58FF6 505 aa14.04□□□□□ -0.16
TRAFD1-202ENST00000412615 KIF1BPQ96EK5 621 aa14.04□□□□□ -0.16
TRAFD1-202ENST00000412615 AXIN2Q9Y2T1 843 aa14.04□□□□□ -0.16
TRAFD1-202ENST00000412615 GIGYF1O75420 1035 aaPredicted RBP14.03□□□□□ -0.16
TRAFD1-202ENST00000412615 SSFA2P28290 1259 aa14.03□□□□□ -0.16
TRAFD1-202ENST00000412615 RHPN1Q8TCX5 695 aa14.03□□□□□ -0.16
TRAFD1-202ENST00000412615 IL1RAPL2Q9NP60 686 aa14.03□□□□□ -0.16
TRAFD1-202ENST00000412615 C1orf167Q5SNV9 1468 aa14.03□□□□□ -0.16
TRAFD1-202ENST00000412615 ISY1Q9ULR0 285 aaKnown RBP14.03□□□□□ -0.16
TRAFD1-202ENST00000412615 HDAC5Q9UQL6 1122 aa14.03□□□□□ -0.16
TRAFD1-202ENST00000412615 PXDNQ92626 1479 aa14.02□□□□□ -0.16
TRAFD1-202ENST00000412615 ANXA1P04083 346 aa14.02□□□□□ -0.16
TRAFD1-202ENST00000412615 ADCY9O60503 1353 aa14.02□□□□□ -0.17
TRAFD1-202ENST00000412615 HEG1Q9ULI3 1381 aa14.02□□□□□ -0.17
TRAFD1-202ENST00000412615 EPB41L2O43491 1005 aaKnown RBP14.02□□□□□ -0.17
TRAFD1-202ENST00000412615 ALDH1L1O75891 902 aa14.02□□□□□ -0.17
TRAFD1-202ENST00000412615 MCM2P49736 904 aa14.02□□□□□ -0.17
TRAFD1-202ENST00000412615 ANAPC15P60006 121 aa14.02□□□□□ -0.17
TRAFD1-202ENST00000412615 MST1RQ04912 1400 aa14.02□□□□□ -0.17
TRAFD1-202ENST00000412615 KSR2Q6VAB6 950 aa14.01□□□□□ -0.17
TRAFD1-202ENST00000412615 RTN4Q9NQC3 1192 aaKnown RBP14.01□□□□□ -0.17
TRAFD1-202ENST00000412615 KIF1AQ12756 1690 aa14.01□□□□□ -0.17
TRAFD1-202ENST00000412615 TRPM3Q9HCF6 1732 aaPredicted RBP14.01□□□□□ -0.17
TRAFD1-202ENST00000412615 NUTM1Q86Y26 1132 aa14.01□□□□□ -0.17
TRAFD1-202ENST00000412615 ANO2Q9NQ90 1003 aa14.01□□□□□ -0.17
TRAFD1-202ENST00000412615 HYPKQ9NX55 129 aa14.01□□□□□ -0.17
TRAFD1-202ENST00000412615 ERBB3P21860 1342 aa14.01□□□□□ -0.17
TRAFD1-202ENST00000412615 BAG4O95429 457 aaKnown RBP14□□□□□ -0.17
TRAFD1-202ENST00000412615 XRCC6P12956 609 aaKnown RBP eCLIP14□□□□□ -0.17
TRAFD1-202ENST00000412615 MTX1Q13505 466 aa14□□□□□ -0.17
TRAFD1-202ENST00000412615 MAP3K2Q9Y2U5 619 aa14□□□□□ -0.17
TRAFD1-202ENST00000412615 CAMTA1Q9Y6Y1 1673 aa14□□□□□ -0.17
TRAFD1-202ENST00000412615 LMTK3Q96Q04 1460 aa14□□□□□ -0.17
TRAFD1-202ENST00000412615 MRE11P49959 708 aa14□□□□□ -0.17
TRAFD1-202ENST00000412615 NEK4P51957 841 aa14□□□□□ -0.17
TRAFD1-202ENST00000412615 UNC5CLQ8IV45 518 aa14□□□□□ -0.17
TRAFD1-202ENST00000412615 C9orf78Q9NZ63 289 aaPredicted RBP14□□□□□ -0.17
TRAFD1-202ENST00000412615 CYP2E1P05181 493 aaPredicted RBP13.99□□□□□ -0.17
TRAFD1-202ENST00000412615 ZC3H6P61129 1189 aaKnown RBP13.99□□□□□ -0.17
TRAFD1-202ENST00000412615 RAPGEF4Q8WZA2 1011 aa13.99□□□□□ -0.17
TRAFD1-202ENST00000412615 TUBGCP6Q96RT7 1819 aa13.99□□□□□ -0.17
TRAFD1-202ENST00000412615 ATF3P18847 181 aa13.99□□□□□ -0.17
TRAFD1-202ENST00000412615 DDX58O95786 925 aaKnown RBP13.98□□□□□ -0.17
TRAFD1-202ENST00000412615 PI4K2BQ8TCG2 481 aa13.98□□□□□ -0.17
TRAFD1-202ENST00000412615 IL17RAQ96F46 866 aa13.98□□□□□ -0.17
TRAFD1-202ENST00000412615 ARXQ96QS3 562 aa13.98□□□□□ -0.17
TRAFD1-202ENST00000412615 OS9Q13438 667 aaPredicted RBP13.98□□□□□ -0.17
TRAFD1-202ENST00000412615 PROSER3Q2NL68 480 aa13.98□□□□□ -0.17
TRAFD1-202ENST00000412615 CNTROBQ8N137 903 aa13.98□□□□□ -0.17
TRAFD1-202ENST00000412615 DDX21Q9NR30 783 aaKnown RBP eCLIP13.98□□□□□ -0.17
TRAFD1-202ENST00000412615 LINS1Q8NG48 757 aa13.97□□□□□ -0.17
TRAFD1-202ENST00000412615 TTC41PQ6P2S7 1318 aa13.97□□□□□ -0.17
TRAFD1-202ENST00000412615 TATP17735 454 aaPredicted RBP13.97□□□□□ -0.17
TRAFD1-202ENST00000412615 ERC1Q8IUD2 1116 aa13.97□□□□□ -0.17
TRAFD1-202ENST00000412615 CLASRPQ8N2M8 674 aaKnown RBP13.97□□□□□ -0.17
TRAFD1-202ENST00000412615 ZGPATQ8N5A5 531 aaKnown RBP13.97□□□□□ -0.17
TRAFD1-202ENST00000412615 NLRP2Q9NX02 1062 aa13.97□□□□□ -0.17
TRAFD1-202ENST00000412615 SPG7Q9UQ90 795 aa13.97□□□□□ -0.17
TRAFD1-202ENST00000412615 USP42Q9H9J4 1324 aaKnown RBP13.96□□□□□ -0.17
TRAFD1-202ENST00000412615 PRAMEF22A3QJZ6 481 aa13.96□□□□□ -0.17
TRAFD1-202ENST00000412615 TMX3Q96JJ7 454 aa13.96□□□□□ -0.17
TRAFD1-202ENST00000412615 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.96□□□□□ -0.174e-6■□□□□ 11.2
TRAFD1-202ENST00000412615 PALD1Q9ULE6 856 aa13.96□□□□□ -0.17
TRAFD1-202ENST00000412615 ZNF790Q6PG37 636 aa13.96□□□□□ -0.18
TRAFD1-202ENST00000412615 FAM43AQ8N2R8 423 aa13.96□□□□□ -0.18
TRAFD1-202ENST00000412615 GRPEL1Q9HAV7 217 aa13.96□□□□□ -0.18
TRAFD1-202ENST00000412615 GLRX3O76003 335 aaKnown RBP13.95□□□□□ -0.18
TRAFD1-202ENST00000412615 KLHL40Q2TBA0 621 aa13.95□□□□□ -0.18
TRAFD1-202ENST00000412615 CWF19L2Q2TBE0 894 aaKnown RBP13.95□□□□□ -0.18
TRAFD1-202ENST00000412615 SLC52A2Q9HAB3 445 aa13.95□□□□□ -0.18
TRAFD1-202ENST00000412615 NPHP3Q7Z494 1330 aa13.95□□□□□ -0.18
TRAFD1-202ENST00000412615 ADAMTS7Q9UKP4 1686 aa13.95□□□□□ -0.18
TRAFD1-202ENST00000412615 GRM8O00222 908 aa13.95□□□□□ -0.18
TRAFD1-202ENST00000412615 HSPA4P34932 840 aa13.95□□□□□ -0.18
TRAFD1-202ENST00000412615 DDX49Q9Y6V7 483 aaKnown RBP13.95□□□□□ -0.18
TRAFD1-202ENST00000412615 ALS2Q96Q42 1657 aa13.94□□□□□ -0.18
TRAFD1-202ENST00000412615 SGSM2O43147 1006 aa13.94□□□□□ -0.18
TRAFD1-202ENST00000412615 MAP4K4O95819 1239 aaPredicted RBP13.94□□□□□ -0.18
TRAFD1-202ENST00000412615 CUL4AQ13619 759 aa13.94□□□□□ -0.18
TRAFD1-202ENST00000412615 PKP1Q13835 747 aa13.94□□□□□ -0.18
TRAFD1-202ENST00000412615 MCTP1Q6DN14 999 aa13.94□□□□□ -0.18
TRAFD1-202ENST00000412615 UTYO14607 1347 aa13.94□□□□□ -0.18
TRAFD1-202ENST00000412615 SIPA1L3O60292 1781 aaPredicted RBP13.94□□□□□ -0.18
TRAFD1-202ENST00000412615 PHKG2P15735 406 aa13.94□□□□□ -0.18
TRAFD1-202ENST00000412615 INTS4Q96HW7 963 aaKnown RBP13.94□□□□□ -0.18
TRAFD1-202ENST00000412615 GPATCH3Q96I76 525 aa13.94□□□□□ -0.18
TRAFD1-202ENST00000412615 TMEM94Q12767 1356 aa13.94□□□□□ -0.18
TRAFD1-202ENST00000412615 DCCP43146 1447 aa13.93□□□□□ -0.18
TRAFD1-202ENST00000412615 AIMP1Q12904 312 aaKnown RBP13.93□□□□□ -0.18
TRAFD1-202ENST00000412615 PDIA6Q15084 440 aa13.93□□□□□ -0.18
TRAFD1-202ENST00000412615 IFNL2Q8IZJ0 200 aa13.93□□□□□ -0.18
TRAFD1-202ENST00000412615 CSB-PGBD3P0DP91 1061 aa13.93□□□□□ -0.18
TRAFD1-202ENST00000412615 LARP1Q6PKG0 1096 aaKnown RBP13.93□□□□□ -0.18
TRAFD1-202ENST00000412615 KIAA1211Q6ZU35 1233 aa13.93□□□□□ -0.18
TRAFD1-202ENST00000412615 RIC3Q7Z5B4 369 aa13.93□□□□□ -0.18
TRAFD1-202ENST00000412615 IFIT2P09913 472 aaKnown RBP13.92□□□□□ -0.18
TRAFD1-202ENST00000412615 SLC39A6Q13433 755 aa13.92□□□□□ -0.18
TRAFD1-202ENST00000412615 NFATC2IPQ8NCF5 419 aa13.92□□□□□ -0.18
TRAFD1-202ENST00000412615 PANK2Q9BZ23 570 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 182.1 ms