RNA–Protein interactions for RNA: ENST00000411993.1

HDAC9-205, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 626 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-205ENST00000411993 MAP3K10Q02779 954 aa9.83□□□□□ -0.84
HDAC9-205ENST00000411993 TBCELQ5QJ74 424 aa9.83□□□□□ -0.84
HDAC9-205ENST00000411993 LARP1Q6PKG0 1096 aaKnown RBP9.83□□□□□ -0.84
HDAC9-205ENST00000411993 ZNF295-AS1Q8N0V1 137 aa9.83□□□□□ -0.84
HDAC9-205ENST00000411993 SIX5Q8N196 739 aa9.83□□□□□ -0.84
HDAC9-205ENST00000411993 WHAMMQ8TF30 809 aa9.83□□□□□ -0.84
HDAC9-205ENST00000411993 CFHR5Q9BXR6 569 aa9.83□□□□□ -0.84
HDAC9-205ENST00000411993 LMOD1P29536 600 aaPredicted RBP9.82□□□□□ -0.84
HDAC9-205ENST00000411993 EPHA4P54764 986 aa9.82□□□□□ -0.84
HDAC9-205ENST00000411993 FIGNL1Q6PIW4 674 aa9.82□□□□□ -0.84
HDAC9-205ENST00000411993 ZDHHC3Q9NYG2 299 aa9.82□□□□□ -0.84
HDAC9-205ENST00000411993 ZNF232Q9UNY5 417 aa9.82□□□□□ -0.84
HDAC9-205ENST00000411993 SFI1A8K8P3 1242 aa9.81□□□□□ -0.84
HDAC9-205ENST00000411993 FOXK2Q01167 660 aa9.81□□□□□ -0.84
HDAC9-205ENST00000411993 CHMP3Q9Y3E7 222 aa9.81□□□□□ -0.84
HDAC9-205ENST00000411993 GJA3Q9Y6H8 435 aa9.81□□□□□ -0.84
HDAC9-205ENST00000411993 M0R2N6 131 aa9.8□□□□□ -0.84
HDAC9-205ENST00000411993 TEAD4Q15561 434 aa9.8□□□□□ -0.84
HDAC9-205ENST00000411993 LYPD4Q6UWN0 246 aa9.8□□□□□ -0.84
HDAC9-205ENST00000411993 BICDL1Q6ZP65 573 aa9.8□□□□□ -0.84
HDAC9-205ENST00000411993 NLRP8Q86W28 1048 aa9.8□□□□□ -0.84
HDAC9-205ENST00000411993 ZDHHC1Q8WTX9 485 aa9.8□□□□□ -0.84
HDAC9-205ENST00000411993 L3MBTL2Q969R5 705 aa9.8□□□□□ -0.84
HDAC9-205ENST00000411993 ABHD17AQ96GS6 310 aa9.8□□□□□ -0.84
HDAC9-205ENST00000411993 ATXN7L1Q9ULK2 861 aaPredicted RBP9.8□□□□□ -0.84
HDAC9-205ENST00000411993 A0A1W2PNR3 127 aa9.79□□□□□ -0.84
HDAC9-205ENST00000411993 NOS2P35228 1153 aa9.79□□□□□ -0.84
HDAC9-205ENST00000411993 UBAP2LQ14157 1087 aaKnown RBP9.79□□□□□ -0.84
HDAC9-205ENST00000411993 TSEN2Q8NCE0 465 aaKnown RBP9.79□□□□□ -0.84
HDAC9-205ENST00000411993 TSPAN10Q9H1Z9 355 aaPredicted RBP9.79□□□□□ -0.84
HDAC9-205ENST00000411993 SERTM1A2A2V5 107 aa9.78□□□□□ -0.84
HDAC9-205ENST00000411993 CELA2BP08218 269 aaPredicted RBP9.78□□□□□ -0.84
HDAC9-205ENST00000411993 TXLNAP40222 546 aa9.78□□□□□ -0.84
HDAC9-205ENST00000411993 MAP2K3P46734 347 aa9.78□□□□□ -0.84
HDAC9-205ENST00000411993 SEC13P55735 322 aa9.78□□□□□ -0.84
HDAC9-205ENST00000411993 PSMA6P60900 246 aaKnown RBP9.78□□□□□ -0.84
HDAC9-205ENST00000411993 ZCCHC2Q9C0B9 1178 aaKnown RBP9.78□□□□□ -0.84
HDAC9-205ENST00000411993 VRTNQ9H8Y1 702 aa9.78□□□□□ -0.84
HDAC9-205ENST00000411993 ADAMTS8Q9UP79 889 aa9.78□□□□□ -0.84
HDAC9-205ENST00000411993 PCDHGC4Q9Y5F7 938 aa9.78□□□□□ -0.84
HDAC9-205ENST00000411993 FGFR3P22607 806 aa9.77□□□□□ -0.85
HDAC9-205ENST00000411993 CRTC2Q53ET0 693 aaPredicted RBP9.77□□□□□ -0.85
HDAC9-205ENST00000411993 KANK4Q5T7N3 995 aaPredicted RBP9.77□□□□□ -0.85
HDAC9-205ENST00000411993 ZIC5Q96T25 663 aa9.77□□□□□ -0.85
HDAC9-205ENST00000411993 ENAMQ9NRM1 1142 aa9.77□□□□□ -0.85
HDAC9-205ENST00000411993 GTF3C3Q9Y5Q9 886 aa9.77□□□□□ -0.85
HDAC9-205ENST00000411993 USP17L15C9J2P7 530 aa9.76□□□□□ -0.85
HDAC9-205ENST00000411993 USP17L10C9JJH3 530 aa9.76□□□□□ -0.85
HDAC9-205ENST00000411993 USP17L13C9JLJ4 530 aa9.76□□□□□ -0.85
HDAC9-205ENST00000411993 USP17L12C9JPN9 530 aa9.76□□□□□ -0.85
HDAC9-205ENST00000411993 USP17L11C9JVI0 530 aa9.76□□□□□ -0.85
HDAC9-205ENST00000411993 USP17L21D6R901 530 aa9.76□□□□□ -0.85
HDAC9-205ENST00000411993 USP17L18D6R9N7 530 aa9.76□□□□□ -0.85
HDAC9-205ENST00000411993 USP17L22D6RA61 530 aa9.76□□□□□ -0.85
HDAC9-205ENST00000411993 USP17L17D6RBQ6 530 aa9.76□□□□□ -0.85
HDAC9-205ENST00000411993 USP17L19D6RCP7 530 aa9.76□□□□□ -0.85
HDAC9-205ENST00000411993 USP17L20D6RJB6 530 aa9.76□□□□□ -0.85
HDAC9-205ENST00000411993 ATXN7O15265 892 aaPredicted RBP9.76□□□□□ -0.85
HDAC9-205ENST00000411993 BNIP3LO60238 219 aa9.76□□□□□ -0.85
HDAC9-205ENST00000411993 BMP4P12644 408 aa9.76□□□□□ -0.85
HDAC9-205ENST00000411993 USP17L24Q0WX57 530 aa9.76□□□□□ -0.85
HDAC9-205ENST00000411993 DCDC2BA2VCK2 349 aa9.75□□□□□ -0.85
HDAC9-205ENST00000411993 FAM196BA6NMK8 535 aa9.75□□□□□ -0.85
HDAC9-205ENST00000411993 PPP1R12BO60237 982 aaPredicted RBP9.75□□□□□ -0.85
HDAC9-205ENST00000411993 DKK1O94907 266 aa9.75□□□□□ -0.85
HDAC9-205ENST00000411993 ARHGEF15O94989 841 aa9.75□□□□□ -0.85
HDAC9-205ENST00000411993 BCRP11274 1271 aa9.75□□□□□ -0.85
HDAC9-205ENST00000411993 MARSP56192 900 aaKnown RBP9.75□□□□□ -0.85
HDAC9-205ENST00000411993 DPYDQ12882 1025 aa9.75□□□□□ -0.85
HDAC9-205ENST00000411993 PTK7Q13308 1070 aa9.75□□□□□ -0.85
HDAC9-205ENST00000411993 ACDQ96AP0 544 aa9.75□□□□□ -0.85
HDAC9-205ENST00000411993 ZMYND15Q9H091 742 aa9.75□□□□□ -0.85
HDAC9-205ENST00000411993 NEUROD4Q9HD90 331 aa9.75□□□□□ -0.85
HDAC9-205ENST00000411993 NDFIP2Q9NV92 336 aa9.75□□□□□ -0.85
HDAC9-205ENST00000411993 KHNYNO15037 678 aaKnown RBP9.74□□□□□ -0.85
HDAC9-205ENST00000411993 CFAP70Q5T0N1 1121 aa9.74□□□□□ -0.85
HDAC9-205ENST00000411993 SH3PXD2AQ5TCZ1 1133 aa9.74□□□□□ -0.85
HDAC9-205ENST00000411993 RHPN1Q8TCX5 695 aa9.74□□□□□ -0.85
HDAC9-205ENST00000411993 HINFPQ9BQA5 517 aa9.74□□□□□ -0.85
HDAC9-205ENST00000411993 OXCT2Q9BYC2 517 aaPredicted RBP9.74□□□□□ -0.85
HDAC9-205ENST00000411993 RNF225M0QZC1 329 aaPredicted RBP9.73□□□□□ -0.85
HDAC9-205ENST00000411993 EML1O00423 815 aa9.73□□□□□ -0.85
HDAC9-205ENST00000411993 RFX1P22670 979 aa9.73□□□□□ -0.85
HDAC9-205ENST00000411993 ANKMY2Q8IV38 441 aa9.73□□□□□ -0.85
HDAC9-205ENST00000411993 CTBSQ01459 385 aa9.72□□□□□ -0.85
HDAC9-205ENST00000411993 NEDD1Q8NHV4 660 aa9.72□□□□□ -0.85
HDAC9-205ENST00000411993 CHMP7Q8WUX9 453 aaPredicted RBP9.72□□□□□ -0.85
HDAC9-205ENST00000411993 SCG3Q8WXD2 468 aaKnown RBP9.72□□□□□ -0.85
HDAC9-205ENST00000411993 KLRG1Q96E93 195 aa9.72□□□□□ -0.85
HDAC9-205ENST00000411993 GPC6Q9Y625 555 aaPredicted RBP9.72□□□□□ -0.85
HDAC9-205ENST00000411993 FAM157BP0CG42 384 aa9.71□□□□□ -0.86
HDAC9-205ENST00000411993 MAPTP10636 758 aaKnown RBP9.71□□□□□ -0.86
HDAC9-205ENST00000411993 CDCA8Q53HL2 280 aa9.71□□□□□ -0.86
HDAC9-205ENST00000411993 LRRC69Q6ZNQ3 347 aa9.71□□□□□ -0.86
HDAC9-205ENST00000411993 HCN4Q9Y3Q4 1203 aa9.71□□□□□ -0.86
HDAC9-205ENST00000411993 CD33P20138 364 aa9.7□□□□□ -0.86
HDAC9-205ENST00000411993 HIRAP54198 1017 aaPredicted RBP9.7□□□□□ -0.86
HDAC9-205ENST00000411993 TNP2Q05952 138 aa9.7□□□□□ -0.86
HDAC9-205ENST00000411993 SAMD5Q5TGI4 173 aa9.7□□□□□ -0.86
HDAC9-205ENST00000411993 PHACTR1Q9C0D0 580 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms