RNA–Protein interactions for RNA: ENST00000409076.6

SNX13-201, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 3,818 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-201ENST00000409076 SOS1Q07889 1333 aaPredicted RBP9.97□□□□□ -0.81
SNX13-201ENST00000409076 TULP4Q9NRJ4 1543 aa9.97□□□□□ -0.81
SNX13-201ENST00000409076 HAP1P54257 671 aaPredicted RBP9.97□□□□□ -0.81
SNX13-201ENST00000409076 ZRSR1Q15695 479 aaKnown RBP9.97□□□□□ -0.81
SNX13-201ENST00000409076 FAM184AQ8NB25 1140 aa9.97□□□□□ -0.81
SNX13-201ENST00000409076 PRR36Q9H6K5 1346 aa9.97□□□□□ -0.81
SNX13-201ENST00000409076 IQGAP1P46940 1657 aa9.96□□□□□ -0.81
SNX13-201ENST00000409076 GNAT3A8MTJ3 354 aa9.96□□□□□ -0.81
SNX13-201ENST00000409076 TRHP20396 242 aaPredicted RBP9.96□□□□□ -0.81
SNX13-201ENST00000409076 LRMPQ12912 555 aa9.96□□□□□ -0.81
SNX13-201ENST00000409076 G3BP1Q13283 466 aaKnown RBP eCLIP9.96□□□□□ -0.81
SNX13-201ENST00000409076 COL9A3Q14050 684 aaPredicted RBP9.96□□□□□ -0.81
SNX13-201ENST00000409076 KIF1BO60333 1816 aa9.96□□□□□ -0.81
SNX13-201ENST00000409076 BIN1O00499 593 aa9.96□□□□□ -0.82
SNX13-201ENST00000409076 ATP2B1P20020 1258 aa9.96□□□□□ -0.82
SNX13-201ENST00000409076 PTGS1P23219 599 aa9.96□□□□□ -0.82
SNX13-201ENST00000409076 PSME1Q06323 249 aa9.96□□□□□ -0.82
SNX13-201ENST00000409076 NAA30Q147X3 362 aaPredicted RBP9.96□□□□□ -0.82
SNX13-201ENST00000409076 PPP4R3BQ5MIZ7 849 aa9.96□□□□□ -0.82
SNX13-201ENST00000409076 WDR33Q9C0J8 1336 aaKnown RBP9.96□□□□□ -0.82
SNX13-201ENST00000409076 METP08581 1390 aa9.96□□□□□ -0.82
SNX13-201ENST00000409076 ZKSCAN1P17029 563 aaPredicted RBP9.96□□□□□ -0.82
SNX13-201ENST00000409076 ARHGAP45Q92619 1136 aa9.96□□□□□ -0.82
SNX13-201ENST00000409076 AMOTL2Q9Y2J4 779 aa9.96□□□□□ -0.82
SNX13-201ENST00000409076 QRICH2Q9H0J4 1663 aa9.96□□□□□ -0.82
SNX13-201ENST00000409076 IQSEC2Q5JU85 1478 aa9.96□□□□□ -0.82
SNX13-201ENST00000409076 LRRC7Q96NW7 1537 aa9.95□□□□□ -0.82
SNX13-201ENST00000409076 BTBD11A6QL63 1104 aa9.95□□□□□ -0.82
SNX13-201ENST00000409076 CHL1O00533 1208 aa9.95□□□□□ -0.82
SNX13-201ENST00000409076 PHF14O94880 888 aa9.95□□□□□ -0.82
SNX13-201ENST00000409076 SNRKQ9NRH2 765 aa9.95□□□□□ -0.82
SNX13-201ENST00000409076 NLRP2Q9NX02 1062 aa9.95□□□□□ -0.82
SNX13-201ENST00000409076 MAP3K2Q9Y2U5 619 aa9.95□□□□□ -0.82
SNX13-201ENST00000409076 NSD2O96028 1365 aa9.95□□□□□ -0.82
SNX13-201ENST00000409076 MROH2AA6NES4 1674 aa9.95□□□□□ -0.82
SNX13-201ENST00000409076 DDX46Q7L014 1031 aaKnown RBP9.94□□□□□ -0.82
SNX13-201ENST00000409076 FTOQ9C0B1 505 aaKnown RBP eCLIP9.94□□□□□ -0.82
SNX13-201ENST00000409076 CYP46A1Q9Y6A2 500 aa9.94□□□□□ -0.82
SNX13-201ENST00000409076 BECN2A8MW95 431 aa9.94□□□□□ -0.82
SNX13-201ENST00000409076 HAND2P61296 217 aa9.94□□□□□ -0.82
SNX13-201ENST00000409076 NOLC1Q14978 699 aaKnown RBP eCLIP9.94□□□□□ -0.82
SNX13-201ENST00000409076 PROSER3Q2NL68 480 aa9.94□□□□□ -0.82
SNX13-201ENST00000409076 C1orf141Q5JVX7 400 aa9.94□□□□□ -0.82
SNX13-201ENST00000409076 CCAR2Q8N163 923 aaKnown RBP9.94□□□□□ -0.82
SNX13-201ENST00000409076 TNMDQ9H2S6 317 aa9.94□□□□□ -0.82
SNX13-201ENST00000409076 TLR7Q9NYK1 1049 aaKnown RBP9.94□□□□□ -0.82
SNX13-201ENST00000409076 NRBP1Q9UHY1 535 aa9.94□□□□□ -0.82
SNX13-201ENST00000409076 SNX14Q9Y5W7 946 aa9.94□□□□□ -0.82
SNX13-201ENST00000409076 ERICH4A6NGS2 130 aa9.94□□□□□ -0.82
SNX13-201ENST00000409076 TPD52L1Q16890 204 aaPredicted RBP9.94□□□□□ -0.82
SNX13-201ENST00000409076 ZNF771Q7L3S4 317 aaPredicted RBP9.94□□□□□ -0.82
SNX13-201ENST00000409076 ZFP91Q96JP5 570 aaPredicted RBP9.94□□□□□ -0.82
SNX13-201ENST00000409076 USP44Q9H0E7 712 aa9.94□□□□□ -0.82
SNX13-201ENST00000409076 PDCL3Q9H2J4 239 aa9.94□□□□□ -0.82
SNX13-201ENST00000409076 TOMM22Q9NS69 142 aa9.94□□□□□ -0.82
SNX13-201ENST00000409076 JAK2O60674 1132 aa9.93□□□□□ -0.82
SNX13-201ENST00000409076 OTUD7BQ6GQQ9 843 aa9.93□□□□□ -0.82
SNX13-201ENST00000409076 CCDC186Q7Z3E2 898 aa9.93□□□□□ -0.82
SNX13-201ENST00000409076 SEC62Q99442 399 aaKnown RBP9.93□□□□□ -0.82
SNX13-201ENST00000409076 DNAJC25Q9H1X3 360 aa9.93□□□□□ -0.82
SNX13-201ENST00000409076 DACT1Q9NYF0 836 aa9.93□□□□□ -0.82
SNX13-201ENST00000409076 PYCARDQ9ULZ3 195 aa9.93□□□□□ -0.82
SNX13-201ENST00000409076 EID1Q9Y6B2 187 aa9.93□□□□□ -0.82
SNX13-201ENST00000409076 U2AF2P26368 475 aaKnown RBP eCLIP9.93□□□□□ -0.824e-6■■■■■ 30.3
SNX13-201ENST00000409076 DDIT3P35638 169 aa9.93□□□□□ -0.82
SNX13-201ENST00000409076 CDC37L1Q7L3B6 337 aa9.93□□□□□ -0.82
SNX13-201ENST00000409076 IL17REQ8NFR9 667 aa9.93□□□□□ -0.82
SNX13-201ENST00000409076 SPATA32Q96LK8 384 aa9.93□□□□□ -0.82
SNX13-201ENST00000409076 NOL7Q9UMY1 257 aaKnown RBP9.93□□□□□ -0.82
SNX13-201ENST00000409076 TULP1O00294 542 aaPredicted RBP9.93□□□□□ -0.82
SNX13-201ENST00000409076 ZSCAN22P10073 491 aaPredicted RBP9.93□□□□□ -0.82
SNX13-201ENST00000409076 ATP8B2P98198 1209 aa9.93□□□□□ -0.82
SNX13-201ENST00000409076 SF3A1Q15459 793 aaKnown RBP9.93□□□□□ -0.82
SNX13-201ENST00000409076 DDX17Q92841 729 aaKnown RBP9.93□□□□□ -0.82
SNX13-201ENST00000409076 TAF6LQ9Y6J9 622 aa9.93□□□□□ -0.82
SNX13-201ENST00000409076 GOLGA6L19H0YKK7 550 aa9.92□□□□□ -0.82
SNX13-201ENST00000409076 ZNF853P0CG23 659 aa9.92□□□□□ -0.82
SNX13-201ENST00000409076 LIG1P18858 919 aa9.92□□□□□ -0.82
SNX13-201ENST00000409076 ZNF445P59923 1031 aa9.92□□□□□ -0.82
SNX13-201ENST00000409076 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.92□□□□□ -0.82
SNX13-201ENST00000409076 NMIQ13287 307 aaPredicted RBP9.92□□□□□ -0.82
SNX13-201ENST00000409076 CCDC183Q5T5S1 534 aa9.92□□□□□ -0.82
SNX13-201ENST00000409076 SASS6Q6UVJ0 657 aa9.92□□□□□ -0.82
SNX13-201ENST00000409076 RUFY3Q7L099 469 aa9.92□□□□□ -0.82
SNX13-201ENST00000409076 CCDC82Q8N4S0 544 aa9.92□□□□□ -0.82
SNX13-201ENST00000409076 DNAAF4Q8WXU2 420 aa9.92□□□□□ -0.82
SNX13-201ENST00000409076 LIMCH1Q9UPQ0 1083 aa9.92□□□□□ -0.82
SNX13-201ENST00000409076 RBM8AQ9Y5S9 174 aaKnown RBP9.92□□□□□ -0.82
SNX13-201ENST00000409076 BRD1O95696 1058 aa9.92□□□□□ -0.82
SNX13-201ENST00000409076 ANO6Q4KMQ2 910 aa9.92□□□□□ -0.82
SNX13-201ENST00000409076 CCDC144CPQ8IYA2 1237 aa9.92□□□□□ -0.82
SNX13-201ENST00000409076 GPATCH3Q96I76 525 aa9.92□□□□□ -0.82
SNX13-201ENST00000409076 PPP1R9BQ96SB3 815 aa9.92□□□□□ -0.82
SNX13-201ENST00000409076 MYD88Q99836 296 aa9.92□□□□□ -0.82
SNX13-201ENST00000409076 PODXL2Q9NZ53 605 aa9.92□□□□□ -0.82
SNX13-201ENST00000409076 RNF17Q9BXT8 1623 aaKnown RBP9.91□□□□□ -0.82
SNX13-201ENST00000409076 PLXNC1O60486 1568 aa9.91□□□□□ -0.82
SNX13-201ENST00000409076 CSPP1Q1MSJ5 1256 aa9.91□□□□□ -0.82
SNX13-201ENST00000409076 SKIDA1Q1XH10 827 aa9.91□□□□□ -0.82
SNX13-201ENST00000409076 NUP62CLQ9H1M0 184 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms