RNA–Protein interactions for RNA: ENST00000404049.7

KDM5C-205, Transcript of lysine demethylase 5C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene KDM5C, Length 5,677 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM5C-205ENST00000404049 LIMCH1Q9UPQ0 1083 aa17.71■□□□□ 0.43
KDM5C-205ENST00000404049 GLRX3O76003 335 aaKnown RBP17.71■□□□□ 0.43
KDM5C-205ENST00000404049 DDX19AQ9NUU7 478 aaKnown RBP17.71■□□□□ 0.43
KDM5C-205ENST00000404049 BTBD11A6QL63 1104 aa17.7■□□□□ 0.42
KDM5C-205ENST00000404049 SYNJ1O43426 1573 aa17.7■□□□□ 0.42
KDM5C-205ENST00000404049 RBM25P49756 843 aaKnown RBP17.7■□□□□ 0.42
KDM5C-205ENST00000404049 GUCY1B3Q02153 619 aa17.7■□□□□ 0.42
KDM5C-205ENST00000404049 SNW1Q13573 536 aaKnown RBP17.7■□□□□ 0.42
KDM5C-205ENST00000404049 KLHL40Q2TBA0 621 aa17.7■□□□□ 0.42
KDM5C-205ENST00000404049 CFAP57Q96MR6 1250 aa17.7■□□□□ 0.42
KDM5C-205ENST00000404049 MRC2Q9UBG0 1479 aa17.7■□□□□ 0.42
KDM5C-205ENST00000404049 STX1AQ16623 288 aa17.69■□□□□ 0.42
KDM5C-205ENST00000404049 CLCN1P35523 988 aa17.69■□□□□ 0.42
KDM5C-205ENST00000404049 BMS1Q14692 1282 aaKnown RBP17.69■□□□□ 0.42
KDM5C-205ENST00000404049 C6orf163Q5TEZ5 329 aa17.69■□□□□ 0.42
KDM5C-205ENST00000404049 TBC1D32Q96NH3 1257 aa17.69■□□□□ 0.42
KDM5C-205ENST00000404049 SPINK5Q9NQ38 1064 aaPredicted RBP17.69■□□□□ 0.42
KDM5C-205ENST00000404049 GJB2P29033 226 aa17.69■□□□□ 0.42
KDM5C-205ENST00000404049 TBC1D9Q6ZT07 1266 aa17.69■□□□□ 0.42
KDM5C-205ENST00000404049 CPLX3Q8WVH0 158 aa17.68■□□□□ 0.42
KDM5C-205ENST00000404049 NUP88Q99567 741 aaPredicted RBP17.68■□□□□ 0.42
KDM5C-205ENST00000404049 LARP6Q9BRS8 491 aaKnown RBP17.68■□□□□ 0.42
KDM5C-205ENST00000404049 THUMPD2Q9BTF0 503 aaKnown RBP17.68■□□□□ 0.42
KDM5C-205ENST00000404049 U3KPZ7 1027 aaPredicted RBP17.68■□□□□ 0.42
KDM5C-205ENST00000404049 FKBP15Q5T1M5 1219 aa17.68■□□□□ 0.42
KDM5C-205ENST00000404049 MIS18AQ9NYP9 233 aa17.68■□□□□ 0.42
KDM5C-205ENST00000404049 CEP126Q9P2H0 1117 aa17.68■□□□□ 0.42
KDM5C-205ENST00000404049 ANKRD18BA2A2Z9 1011 aa17.68■□□□□ 0.42
KDM5C-205ENST00000404049 C8orf76Q96K31 380 aa17.68■□□□□ 0.42
KDM5C-205ENST00000404049 PAXBP1Q9Y5B6 917 aa17.68■□□□□ 0.42
KDM5C-205ENST00000404049 C11orf95C9JLR9 678 aaPredicted RBP17.68■□□□□ 0.42
KDM5C-205ENST00000404049 LMAN1P49257 510 aa17.68■□□□□ 0.42
KDM5C-205ENST00000404049 CCDC178Q5BJE1 867 aa17.67■□□□□ 0.42
KDM5C-205ENST00000404049 LRSAM1Q6UWE0 723 aa17.67■□□□□ 0.42
KDM5C-205ENST00000404049 FSIP1Q8NA03 581 aa17.67■□□□□ 0.42
KDM5C-205ENST00000404049 BCCIPQ9P287 314 aaKnown RBP eCLIP17.67■□□□□ 0.42
KDM5C-205ENST00000404049 DUSP27Q5VZP5 1158 aa17.67■□□□□ 0.42
KDM5C-205ENST00000404049 PAFAH1B1P43034 410 aa17.67■□□□□ 0.42
KDM5C-205ENST00000404049 IRX3P78415 501 aaPredicted RBP17.67■□□□□ 0.42
KDM5C-205ENST00000404049 STX6O43752 255 aa17.66■□□□□ 0.42
KDM5C-205ENST00000404049 CTR9Q6PD62 1173 aa17.66■□□□□ 0.42
KDM5C-205ENST00000404049 AIDAQ96BJ3 306 aa17.66■□□□□ 0.42
KDM5C-205ENST00000404049 GOPCQ9HD26 462 aa17.66■□□□□ 0.42
KDM5C-205ENST00000404049 IGHDP01880 384 aa17.66■□□□□ 0.42
KDM5C-205ENST00000404049 POTEJP0CG39 1038 aa17.66■□□□□ 0.42
KDM5C-205ENST00000404049 NEBLO76041 1014 aa17.66■□□□□ 0.42
KDM5C-205ENST00000404049 FEZ1Q99689 392 aa17.66■□□□□ 0.42
KDM5C-205ENST00000404049 BOLA2Q9H3K6 86 aa17.66■□□□□ 0.42
KDM5C-205ENST00000404049 IDH1O75874 414 aaKnown RBP17.65■□□□□ 0.42
KDM5C-205ENST00000404049 ZNF830Q96NB3 372 aaPredicted RBP17.65■□□□□ 0.42
KDM5C-205ENST00000404049 IVLP07476 585 aa17.65■□□□□ 0.42
KDM5C-205ENST00000404049 GNAT3A8MTJ3 354 aa17.65■□□□□ 0.42
KDM5C-205ENST00000404049 YEATS4O95619 227 aa17.65■□□□□ 0.42
KDM5C-205ENST00000404049 XRCC6P12956 609 aaKnown RBP eCLIP17.65■□□□□ 0.42
KDM5C-205ENST00000404049 SSR1P43307 286 aaKnown RBP17.65■□□□□ 0.42
KDM5C-205ENST00000404049 CNNM3Q8NE01 707 aa17.65■□□□□ 0.42
KDM5C-205ENST00000404049 CACNA2D4Q7Z3S7 1137 aa17.65■□□□□ 0.42
KDM5C-205ENST00000404049 DAAM2Q86T65 1068 aa17.65■□□□□ 0.42
KDM5C-205ENST00000404049 DNA2P51530 1060 aa17.64■□□□□ 0.41
KDM5C-205ENST00000404049 MCM10Q7L590 875 aa17.64■□□□□ 0.41
KDM5C-205ENST00000404049 NAA15Q9BXJ9 866 aaKnown RBP17.64■□□□□ 0.41
KDM5C-205ENST00000404049 PRXQ9BXM0 1461 aa17.64■□□□□ 0.41
KDM5C-205ENST00000404049 UBE2HP62256 183 aa17.64■□□□□ 0.41
KDM5C-205ENST00000404049 UBE4AQ14139 1066 aa17.64■□□□□ 0.41
KDM5C-205ENST00000404049 ANKLE2Q86XL3 938 aa17.64■□□□□ 0.41
KDM5C-205ENST00000404049 ZFP91Q96JP5 570 aaPredicted RBP17.64■□□□□ 0.41
KDM5C-205ENST00000404049 GSTTP1A0A1W2PQM5 241 aa17.64■□□□□ 0.41
KDM5C-205ENST00000404049 USO1O60763 962 aaKnown RBP17.64■□□□□ 0.41
KDM5C-205ENST00000404049 SF3B2Q13435 895 aaKnown RBP17.64■□□□□ 0.41
KDM5C-205ENST00000404049 TFIP11Q9UBB9 837 aaKnown RBP17.64■□□□□ 0.41
KDM5C-205ENST00000404049 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.64■□□□□ 0.416e-6■□□□□ 9.1
KDM5C-205ENST00000404049 BIN1O00499 593 aa17.63■□□□□ 0.41
KDM5C-205ENST00000404049 HMGB1P09429 215 aaKnown RBP17.63■□□□□ 0.41
KDM5C-205ENST00000404049 HSPA4P34932 840 aa17.63■□□□□ 0.41
KDM5C-205ENST00000404049 BBXQ8WY36 941 aaPredicted RBP17.63■□□□□ 0.41
KDM5C-205ENST00000404049 PPP1R1BQ9UD71 204 aaPredicted RBP17.63■□□□□ 0.41
KDM5C-205ENST00000404049 KRT222Q8N1A0 295 aa17.63■□□□□ 0.41
KDM5C-205ENST00000404049 TRIM27P14373 513 aa17.63■□□□□ 0.41
KDM5C-205ENST00000404049 BMP2KLQ5H9B9 411 aa17.63■□□□□ 0.41
KDM5C-205ENST00000404049 SPECC1Q5M775 1068 aa17.63■□□□□ 0.41
KDM5C-205ENST00000404049 TSG101Q99816 390 aa17.63■□□□□ 0.41
KDM5C-205ENST00000404049 CCDC150Q8NCX0 1101 aa17.63■□□□□ 0.41
KDM5C-205ENST00000404049 TAOK3Q9H2K8 898 aa17.63■□□□□ 0.41
KDM5C-205ENST00000404049 ABCC11Q96J66 1382 aa17.63■□□□□ 0.41
KDM5C-205ENST00000404049 TOP2BQ02880 1626 aa17.63■□□□□ 0.41
KDM5C-205ENST00000404049 GOLGA6L9A6NEM1 432 aa17.62■□□□□ 0.41
KDM5C-205ENST00000404049 ZNF165P49910 485 aa17.62■□□□□ 0.41
KDM5C-205ENST00000404049 NOLC1Q14978 699 aaKnown RBP eCLIP17.62■□□□□ 0.41
KDM5C-205ENST00000404049 LRP2BPQ9P2M1 347 aa17.62■□□□□ 0.41
KDM5C-205ENST00000404049 CCDC171Q6TFL3 1326 aa17.62■□□□□ 0.41
KDM5C-205ENST00000404049 CCDC141Q6ZP82 1450 aa17.62■□□□□ 0.41
KDM5C-205ENST00000404049 POGZQ7Z3K3 1410 aa17.62■□□□□ 0.41
KDM5C-205ENST00000404049 HCLS1P14317 486 aaPredicted RBP17.62■□□□□ 0.41
KDM5C-205ENST00000404049 PRDM11Q9NQV5 511 aa17.62■□□□□ 0.41
KDM5C-205ENST00000404049 VPS36Q86VN1 386 aa17.61■□□□□ 0.41
KDM5C-205ENST00000404049 PANK2Q9BZ23 570 aa17.61■□□□□ 0.41
KDM5C-205ENST00000404049 IGHMBP2P38935 993 aaKnown RBP17.61■□□□□ 0.41
KDM5C-205ENST00000404049 ANAPC15P60006 121 aa17.61■□□□□ 0.41
KDM5C-205ENST00000404049 GIMAP6Q6P9H5 292 aa17.61■□□□□ 0.41
KDM5C-205ENST00000404049 KCNH5Q8NCM2 988 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms