RNA–Protein interactions for RNA: ENST00000403890.7

NUP43-204, Transcript of nucleoporin 43, humanhuman

TSL 2

Gene NUP43, Length 1,012 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-204ENST00000403890 PKD1L3Q7Z443 1732 aa13.08□□□□□ -0.32
NUP43-204ENST00000403890 INSRP06213 1382 aa13.07□□□□□ -0.32
NUP43-204ENST00000403890 ARFGEF1Q9Y6D6 1849 aa13.07□□□□□ -0.32
NUP43-204ENST00000403890 RC3H1Q5TC82 1133 aaKnown RBP13.07□□□□□ -0.32
NUP43-204ENST00000403890 MAMSTRQ6ZN01 415 aa13.07□□□□□ -0.32
NUP43-204ENST00000403890 PRDM10Q9NQV6 1147 aa13.07□□□□□ -0.32
NUP43-204ENST00000403890 ATG3Q9NT62 314 aa13.07□□□□□ -0.32
NUP43-204ENST00000403890 BRCA1P38398 1863 aaKnown RBP13.07□□□□□ -0.32
NUP43-204ENST00000403890 FOXN1O15353 648 aa13.06□□□□□ -0.32
NUP43-204ENST00000403890 RPS6KA4O75676 772 aa13.06□□□□□ -0.32
NUP43-204ENST00000403890 CARD11Q9BXL7 1154 aa13.06□□□□□ -0.32
NUP43-204ENST00000403890 C4AP0C0L4 1744 aa13.05□□□□□ -0.32
NUP43-204ENST00000403890 POTEB2H3BUK9 544 aa13.05□□□□□ -0.32
NUP43-204ENST00000403890 CHRNA5P30532 468 aa13.05□□□□□ -0.32
NUP43-204ENST00000403890 MKRN1Q9UHC7 482 aaKnown RBP13.05□□□□□ -0.32
NUP43-204ENST00000403890 FYB1O15117 783 aa13.04□□□□□ -0.32
NUP43-204ENST00000403890 LMNB1P20700 586 aa13.04□□□□□ -0.32
NUP43-204ENST00000403890 GGNBP2Q9H3C7 697 aa13.04□□□□□ -0.32
NUP43-204ENST00000403890 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.04□□□□□ -0.322e-8■□□□□ 8.7
NUP43-204ENST00000403890 SBF1O95248 1867 aa13.04□□□□□ -0.32
NUP43-204ENST00000403890 CTCFP49711 727 aaPredicted RBP13.03□□□□□ -0.32
NUP43-204ENST00000403890 RASSF7Q02833 373 aa13.03□□□□□ -0.32
NUP43-204ENST00000403890 FAM161AQ3B820 660 aa13.03□□□□□ -0.32
NUP43-204ENST00000403890 IFNL2Q8IZJ0 200 aa13.03□□□□□ -0.32
NUP43-204ENST00000403890 SLC4A9Q96Q91 983 aa13.03□□□□□ -0.32
NUP43-204ENST00000403890 CNTNAP4Q9C0A0 1308 aa13.03□□□□□ -0.32
NUP43-204ENST00000403890 FLT4P35916 1363 aa13.03□□□□□ -0.32
NUP43-204ENST00000403890 POTECB2RU33 542 aa13.02□□□□□ -0.33
NUP43-204ENST00000403890 DPY19L2Q6NUT2 758 aa13.02□□□□□ -0.33
NUP43-204ENST00000403890 AIDAQ96BJ3 306 aa13.02□□□□□ -0.33
NUP43-204ENST00000403890 SIN3AQ96ST3 1273 aa13.02□□□□□ -0.33
NUP43-204ENST00000403890 KIF24Q5T7B8 1368 aa13.02□□□□□ -0.33
NUP43-204ENST00000403890 KDM6AO15550 1401 aaPredicted RBP13.02□□□□□ -0.33
NUP43-204ENST00000403890 PHKG2P15735 406 aa13.01□□□□□ -0.33
NUP43-204ENST00000403890 DDR1Q08345 913 aa13.01□□□□□ -0.33
NUP43-204ENST00000403890 NEUROD1Q13562 356 aa13.01□□□□□ -0.33
NUP43-204ENST00000403890 FKBP8Q14318 412 aa13.01□□□□□ -0.33
NUP43-204ENST00000403890 KIF12Q96FN5 646 aa13.01□□□□□ -0.33
NUP43-204ENST00000403890 ZBTB47Q9UFB7 747 aaPredicted RBP13.01□□□□□ -0.33
NUP43-204ENST00000403890 KDRP35968 1356 aa13.01□□□□□ -0.33
NUP43-204ENST00000403890 ABHD8Q96I13 439 aa12.99□□□□□ -0.33
NUP43-204ENST00000403890 SRP68Q9UHB9 627 aaKnown RBP12.99□□□□□ -0.33
NUP43-204ENST00000403890 CNTNAP1P78357 1384 aa12.98□□□□□ -0.33
NUP43-204ENST00000403890 ERVV-2B6SEH9 535 aa12.98□□□□□ -0.33
NUP43-204ENST00000403890 POLRMTO00411 1230 aaKnown RBP12.98□□□□□ -0.33
NUP43-204ENST00000403890 SLC24A1O60721 1099 aa12.98□□□□□ -0.33
NUP43-204ENST00000403890 TM4SF1P30408 202 aa12.98□□□□□ -0.33
NUP43-204ENST00000403890 LBX1P52954 281 aa12.98□□□□□ -0.33
NUP43-204ENST00000403890 NCAPD2Q15021 1401 aa12.97□□□□□ -0.33
NUP43-204ENST00000403890 TONSLQ96HA7 1378 aa12.97□□□□□ -0.33
NUP43-204ENST00000403890 USP42Q9H9J4 1324 aaKnown RBP12.97□□□□□ -0.33
NUP43-204ENST00000403890 MLLT1Q03111 559 aaPredicted RBP12.97□□□□□ -0.33
NUP43-204ENST00000403890 PLCD3Q8N3E9 789 aa12.97□□□□□ -0.33
NUP43-204ENST00000403890 TTLL6Q8N841 843 aa12.97□□□□□ -0.33
NUP43-204ENST00000403890 EYA1Q99502 592 aa12.97□□□□□ -0.33
NUP43-204ENST00000403890 PPM1GO15355 546 aaPredicted RBP12.96□□□□□ -0.33
NUP43-204ENST00000403890 CRKLP46109 303 aaKnown RBP12.96□□□□□ -0.33
NUP43-204ENST00000403890 TESK2Q96S53 571 aa12.96□□□□□ -0.33
NUP43-204ENST00000403890 WBP1LQ9NX94 342 aa12.96□□□□□ -0.33
NUP43-204ENST00000403890 EMILIN1Q9Y6C2 1016 aa12.96□□□□□ -0.33
NUP43-204ENST00000403890 NFKBIEO00221 500 aa12.95□□□□□ -0.34
NUP43-204ENST00000403890 VEGFBP49765 207 aa12.95□□□□□ -0.34
NUP43-204ENST00000403890 SCUBE2Q9NQ36 999 aa12.95□□□□□ -0.34
NUP43-204ENST00000403890 PLSCR2Q9NRY7 297 aa12.95□□□□□ -0.34
NUP43-204ENST00000403890 ZNF831Q5JPB2 1677 aa12.94□□□□□ -0.34
NUP43-204ENST00000403890 PTCD1O75127 700 aaKnown RBP12.94□□□□□ -0.34
NUP43-204ENST00000403890 ZPR1O75312 459 aa12.94□□□□□ -0.34
NUP43-204ENST00000403890 HSP90AB1P08238 724 aaKnown RBP12.94□□□□□ -0.34
NUP43-204ENST00000403890 TIE1P35590 1138 aa12.94□□□□□ -0.34
NUP43-204ENST00000403890 ERFEQ4G0M1 354 aa12.94□□□□□ -0.34
NUP43-204ENST00000403890 MYH14Q7Z406 1995 aaKnown RBP12.94□□□□□ -0.34
NUP43-204ENST00000403890 WASHC2AQ641Q2 1341 aa12.93□□□□□ -0.34
NUP43-204ENST00000403890 ST20-MTHFSA0A0A6YYL1 179 aa12.93□□□□□ -0.34
NUP43-204ENST00000403890 POTEJP0CG39 1038 aa12.93□□□□□ -0.34
NUP43-204ENST00000403890 RGS19P49795 217 aa12.93□□□□□ -0.34
NUP43-204ENST00000403890 ATN1P54259 1190 aaPredicted RBP12.93□□□□□ -0.34
NUP43-204ENST00000403890 PASKQ96RG2 1323 aa12.92□□□□□ -0.34
NUP43-204ENST00000403890 CCDC85CA6NKD9 419 aa12.92□□□□□ -0.34
NUP43-204ENST00000403890 TMEM88BA6NKF7 163 aa12.92□□□□□ -0.34
NUP43-204ENST00000403890 H0YIN7 160 aa12.92□□□□□ -0.34
NUP43-204ENST00000403890 CABP4P57796 275 aa12.92□□□□□ -0.34
NUP43-204ENST00000403890 USPL1Q5W0Q7 1092 aa12.92□□□□□ -0.34
NUP43-204ENST00000403890 C2CD5Q86YS7 1000 aa12.92□□□□□ -0.34
NUP43-204ENST00000403890 COL5A3P25940 1745 aaPredicted RBP12.91□□□□□ -0.34
NUP43-204ENST00000403890 HSPA8P11142 646 aaKnown RBP12.91□□□□□ -0.34
NUP43-204ENST00000403890 INTS5Q6P9B9 1019 aaKnown RBP12.91□□□□□ -0.34
NUP43-204ENST00000403890 POTEMA6NI47 508 aa12.9□□□□□ -0.34
NUP43-204ENST00000403890 MAP3K13O43283 966 aa12.9□□□□□ -0.34
NUP43-204ENST00000403890 DDNO94850 711 aaPredicted RBP12.9□□□□□ -0.34
NUP43-204ENST00000403890 MAP2K1Q02750 393 aaPredicted RBP12.9□□□□□ -0.34
NUP43-204ENST00000403890 NFIXQ14938 502 aa12.9□□□□□ -0.34
NUP43-204ENST00000403890 LDHDQ86WU2 507 aa12.9□□□□□ -0.34
NUP43-204ENST00000403890 RASEFQ8IZ41 740 aa12.9□□□□□ -0.34
NUP43-204ENST00000403890 CCDC88AQ3V6T2 1871 aa12.89□□□□□ -0.35
NUP43-204ENST00000403890 IQCA1LA6NCM1 817 aa12.89□□□□□ -0.35
NUP43-204ENST00000403890 SERPINB2P05120 415 aa12.89□□□□□ -0.35
NUP43-204ENST00000403890 BMP2KQ9NSY1 1161 aaPredicted RBP12.89□□□□□ -0.35
NUP43-204ENST00000403890 TIAM2Q8IVF5 1701 aa12.88□□□□□ -0.35
NUP43-204ENST00000403890 C21orf2O43822 256 aa12.88□□□□□ -0.35
NUP43-204ENST00000403890 ITGBL1O95965 494 aaPredicted RBP12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms