RNA–Protein interactions for RNA: ENST00000402458.1

SNU13-204, Transcript of small nuclear ribonucleoprotein 13, humanhuman

TSL 3 BASIC

Gene SNU13, Length 462 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNU13-204ENST00000402458 CDCA7LQ96GN5 454 aa17.6■□□□□ 0.41
SNU13-204ENST00000402458 CNTNAP4Q9C0A0 1308 aa17.6■□□□□ 0.41
SNU13-204ENST00000402458 CRKLP46109 303 aaKnown RBP17.59■□□□□ 0.41
SNU13-204ENST00000402458 CCDC87Q9NVE4 849 aa17.59■□□□□ 0.41
SNU13-204ENST00000402458 USP16Q9Y5T5 823 aa17.59■□□□□ 0.41
SNU13-204ENST00000402458 PRAMEF22A3QJZ6 481 aa17.58■□□□□ 0.4
SNU13-204ENST00000402458 ELL2O00472 640 aaPredicted RBP17.58■□□□□ 0.4
SNU13-204ENST00000402458 EIF2S2P20042 333 aaKnown RBP17.58■□□□□ 0.4
SNU13-204ENST00000402458 EXOSC9Q06265 439 aaKnown RBP17.58■□□□□ 0.4
SNU13-204ENST00000402458 KRT24Q2M2I5 525 aa17.58■□□□□ 0.4
SNU13-204ENST00000402458 TWISTNBQ3B726 338 aaPredicted RBP17.58■□□□□ 0.4
SNU13-204ENST00000402458 NPM2Q86SE8 214 aaKnown RBP17.58■□□□□ 0.4
SNU13-204ENST00000402458 C8orf58Q8NAV2 365 aa17.58■□□□□ 0.4
SNU13-204ENST00000402458 TFCP2L1Q9NZI6 479 aa17.58■□□□□ 0.4
SNU13-204ENST00000402458 GNPATO15228 680 aa17.57■□□□□ 0.4
SNU13-204ENST00000402458 SLC15A2Q16348 729 aa17.57■□□□□ 0.4
SNU13-204ENST00000402458 HDGFL1Q5TGJ6 251 aa17.57■□□□□ 0.4
SNU13-204ENST00000402458 AKT1S1Q96B36 256 aa17.57■□□□□ 0.4
SNU13-204ENST00000402458 RTCBQ9Y3I0 505 aaKnown RBP17.57■□□□□ 0.4
SNU13-204ENST00000402458 TRMT2AQ8IZ69 625 aaKnown RBP17.56■□□□□ 0.4
SNU13-204ENST00000402458 ANO8Q9HCE9 1232 aaPredicted RBP17.56■□□□□ 0.4
SNU13-204ENST00000402458 MYH14Q7Z406 1995 aaKnown RBP17.55■□□□□ 0.4
SNU13-204ENST00000402458 ERBB4Q15303 1308 aa17.55■□□□□ 0.4
SNU13-204ENST00000402458 A1BGP04217 495 aa17.55■□□□□ 0.4
SNU13-204ENST00000402458 CANXP27824 592 aaKnown RBP17.55■□□□□ 0.4
SNU13-204ENST00000402458 ZNF827Q17R98 1081 aa17.55■□□□□ 0.4
SNU13-204ENST00000402458 CCDC30Q5VVM6 783 aa17.55■□□□□ 0.4
SNU13-204ENST00000402458 INTS5Q6P9B9 1019 aaKnown RBP17.55■□□□□ 0.4
SNU13-204ENST00000402458 FLAD1Q8NFF5 587 aa17.55■□□□□ 0.4
SNU13-204ENST00000402458 RPS6KA4O75676 772 aa17.54■□□□□ 0.4
SNU13-204ENST00000402458 SSFA2P28290 1259 aa17.54■□□□□ 0.4
SNU13-204ENST00000402458 TSPYL6Q8N831 410 aa17.54■□□□□ 0.4
SNU13-204ENST00000402458 NECTIN2Q92692 538 aa17.54■□□□□ 0.4
SNU13-204ENST00000402458 ZBTB1Q9Y2K1 713 aa17.54■□□□□ 0.4
SNU13-204ENST00000402458 UBR3Q6ZT12 1888 aa17.53■□□□□ 0.4
SNU13-204ENST00000402458 IL6STP40189 918 aaPredicted RBP17.53■□□□□ 0.4
SNU13-204ENST00000402458 STK31Q9BXU1 1019 aa17.53■□□□□ 0.4
SNU13-204ENST00000402458 ZNF330Q9Y3S2 320 aaPredicted RBP17.53■□□□□ 0.4
SNU13-204ENST00000402458 QSER1Q2KHR3 1735 aa17.52■□□□□ 0.4
SNU13-204ENST00000402458 A0A087WZG4 1122 aa17.52■□□□□ 0.4
SNU13-204ENST00000402458 MSH5O43196 834 aa17.52■□□□□ 0.4
SNU13-204ENST00000402458 PHF14O94880 888 aa17.52■□□□□ 0.4
SNU13-204ENST00000402458 ADRA2BP18089 450 aa17.52■□□□□ 0.4
SNU13-204ENST00000402458 TRAPPC3LQ5T215 181 aa17.52■□□□□ 0.4
SNU13-204ENST00000402458 DBF4Q9UBU7 674 aaPredicted RBP17.52■□□□□ 0.4
SNU13-204ENST00000402458 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.51■□□□□ 0.39
SNU13-204ENST00000402458 VAMP4O75379 141 aa17.51■□□□□ 0.39
SNU13-204ENST00000402458 CT47B1P0C2W7 299 aaPredicted RBP17.51■□□□□ 0.39
SNU13-204ENST00000402458 MYL6BP14649 208 aa17.51■□□□□ 0.39
SNU13-204ENST00000402458 R3HDM1Q15032 1099 aaKnown RBP17.51■□□□□ 0.39
SNU13-204ENST00000402458 TUBGCP6Q96RT7 1819 aa17.51■□□□□ 0.39
SNU13-204ENST00000402458 RFC4P35249 363 aa17.5■□□□□ 0.39
SNU13-204ENST00000402458 PIP4K2AP48426 406 aaPredicted RBP17.5■□□□□ 0.39
SNU13-204ENST00000402458 ZNF428Q96B54 188 aa17.5■□□□□ 0.39
SNU13-204ENST00000402458 ARXQ96QS3 562 aa17.5■□□□□ 0.39
SNU13-204ENST00000402458 DDX21Q9NR30 783 aaKnown RBP eCLIP17.5■□□□□ 0.39
SNU13-204ENST00000402458 CHPF2Q9P2E5 772 aa17.5■□□□□ 0.39
SNU13-204ENST00000402458 NBPF26B4DH59 902 aa17.49■□□□□ 0.39
SNU13-204ENST00000402458 EIF5P55010 431 aaKnown RBP17.49■□□□□ 0.39
SNU13-204ENST00000402458 NBPF10Q6P3W6 841 aaKnown RBP17.49■□□□□ 0.39
SNU13-204ENST00000402458 NBPF15Q8N660 670 aa17.49■□□□□ 0.39
SNU13-204ENST00000402458 HYPKQ9NX55 129 aa17.49■□□□□ 0.39
SNU13-204ENST00000402458 CACNA1FO60840 1977 aa17.49■□□□□ 0.39
SNU13-204ENST00000402458 COL15A1P39059 1388 aa17.49■□□□□ 0.39
SNU13-204ENST00000402458 PNPLA7Q6ZV29 1317 aa17.48■□□□□ 0.39
SNU13-204ENST00000402458 PSDA5PKW4 1024 aaPredicted RBP17.48■□□□□ 0.39
SNU13-204ENST00000402458 ZPR1O75312 459 aa17.48■□□□□ 0.39
SNU13-204ENST00000402458 ARHGEF1Q92888 912 aaKnown RBP17.48■□□□□ 0.39
SNU13-204ENST00000402458 ANXA1P04083 346 aa17.46■□□□□ 0.39
SNU13-204ENST00000402458 PDIA6Q15084 440 aa17.46■□□□□ 0.39
SNU13-204ENST00000402458 KIF6Q6ZMV9 814 aa17.46■□□□□ 0.39
SNU13-204ENST00000402458 SMIM5Q71RC9 77 aa17.46■□□□□ 0.39
SNU13-204ENST00000402458 DZIP3Q86Y13 1208 aaKnown RBP17.46■□□□□ 0.39
SNU13-204ENST00000402458 COL23A1Q86Y22 540 aaPredicted RBP17.46■□□□□ 0.39
SNU13-204ENST00000402458 TCERG1O14776 1098 aaKnown RBP17.45■□□□□ 0.38
SNU13-204ENST00000402458 SLC4A2P04920 1241 aa17.45■□□□□ 0.38
SNU13-204ENST00000402458 PROSER3Q2NL68 480 aa17.45■□□□□ 0.38
SNU13-204ENST00000402458 ALDH1L2Q3SY69 923 aa17.45■□□□□ 0.38
SNU13-204ENST00000402458 AMIGO3Q86WK7 504 aa17.45■□□□□ 0.38
SNU13-204ENST00000402458 SLC16A10Q8TF71 515 aa17.45■□□□□ 0.38
SNU13-204ENST00000402458 C4AP0C0L4 1744 aa17.44■□□□□ 0.38
SNU13-204ENST00000402458 AIMP1Q12904 312 aaKnown RBP17.44■□□□□ 0.38
SNU13-204ENST00000402458 NARFQ9UHQ1 456 aa17.44■□□□□ 0.38
SNU13-204ENST00000402458 TBC1D2BQ9UPU7 963 aa17.44■□□□□ 0.38
SNU13-204ENST00000402458 DDX58O95786 925 aaKnown RBP17.43■□□□□ 0.38
SNU13-204ENST00000402458 COPS6Q7L5N1 327 aa17.43■□□□□ 0.38
SNU13-204ENST00000402458 XAGE3Q8WTP9 111 aa17.43■□□□□ 0.38
SNU13-204ENST00000402458 ZNF652Q9Y2D9 606 aa17.43■□□□□ 0.38
SNU13-204ENST00000402458 USP42Q9H9J4 1324 aaKnown RBP17.43■□□□□ 0.38
SNU13-204ENST00000402458 USPL1Q5W0Q7 1092 aa17.42■□□□□ 0.38
SNU13-204ENST00000402458 SMC4Q9NTJ3 1288 aa17.42■□□□□ 0.38
SNU13-204ENST00000402458 CASZ1Q86V15 1759 aa17.41■□□□□ 0.38
SNU13-204ENST00000402458 TTLL7Q6ZT98 887 aa17.41■□□□□ 0.38
SNU13-204ENST00000402458 LRP10Q7Z4F1 713 aa17.41■□□□□ 0.38
SNU13-204ENST00000402458 SSH1Q8WYL5 1049 aa17.41■□□□□ 0.38
SNU13-204ENST00000402458 SRP68Q9UHB9 627 aaKnown RBP17.41■□□□□ 0.38
SNU13-204ENST00000402458 MAP3K15Q6ZN16 1313 aa17.41■□□□□ 0.38
SNU13-204ENST00000402458 ERVV-1B6SEH8 477 aa17.4■□□□□ 0.38
SNU13-204ENST00000402458 RARSP54136 660 aaKnown RBP17.4■□□□□ 0.38
SNU13-204ENST00000402458 NLGN1Q8N2Q7 840 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms