RNA–Protein interactions for RNA: ENST00000401596.1

CNN3P1-201, Transcript of calponin 3 pseudogene 1, humanhuman

BASIC

Gene CNN3P1, Length 935 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3P1-201ENST00000401596 ONECUT3O60422 494 aaPredicted RBP9.44□□□□□ -0.9
CNN3P1-201ENST00000401596 PRELPP51888 382 aa9.44□□□□□ -0.9
CNN3P1-201ENST00000401596 TAF7Q15545 349 aaPredicted RBP9.44□□□□□ -0.9
CNN3P1-201ENST00000401596 USHBP1Q8N6Y0 703 aa9.44□□□□□ -0.9
CNN3P1-201ENST00000401596 FRAT1Q92837 279 aaPredicted RBP9.44□□□□□ -0.9
CNN3P1-201ENST00000401596 LAS1LQ9Y4W2 734 aaKnown RBP9.44□□□□□ -0.9
CNN3P1-201ENST00000401596 ABCC4O15439 1325 aa9.44□□□□□ -0.9
CNN3P1-201ENST00000401596 PKD1L3Q7Z443 1732 aa9.44□□□□□ -0.9
CNN3P1-201ENST00000401596 SIPA1L3O60292 1781 aaPredicted RBP9.44□□□□□ -0.9
CNN3P1-201ENST00000401596 HEG1Q9ULI3 1381 aa9.43□□□□□ -0.9
CNN3P1-201ENST00000401596 HSPA6P17066 643 aa9.43□□□□□ -0.9
CNN3P1-201ENST00000401596 ZC3H6P61129 1189 aaKnown RBP9.43□□□□□ -0.9
CNN3P1-201ENST00000401596 FAM98CQ17RN3 349 aaKnown RBP9.43□□□□□ -0.9
CNN3P1-201ENST00000401596 LMOD2Q6P5Q4 547 aa9.43□□□□□ -0.9
CNN3P1-201ENST00000401596 OTUD5Q96G74 571 aa9.43□□□□□ -0.9
CNN3P1-201ENST00000401596 ZBTB47Q9UFB7 747 aaPredicted RBP9.43□□□□□ -0.9
CNN3P1-201ENST00000401596 DDX19BQ9UMR2 479 aa9.43□□□□□ -0.9
CNN3P1-201ENST00000401596 SHANK3Q9BYB0 1731 aa9.42□□□□□ -0.9
CNN3P1-201ENST00000401596 NWD2Q9ULI1 1742 aa9.42□□□□□ -0.9
CNN3P1-201ENST00000401596 TCERG1O14776 1098 aaKnown RBP9.42□□□□□ -0.9
CNN3P1-201ENST00000401596 TRIM37O94972 964 aa9.42□□□□□ -0.9
CNN3P1-201ENST00000401596 APBA3O96018 575 aa9.42□□□□□ -0.9
CNN3P1-201ENST00000401596 HOXB7P09629 217 aa9.42□□□□□ -0.9
CNN3P1-201ENST00000401596 CANXP27824 592 aaKnown RBP9.42□□□□□ -0.9
CNN3P1-201ENST00000401596 COL13A1Q5TAT6 717 aaPredicted RBP9.42□□□□□ -0.9
CNN3P1-201ENST00000401596 CABLES1Q8TDN4 633 aa9.42□□□□□ -0.9
CNN3P1-201ENST00000401596 ZBTB40Q9NUA8 1239 aa9.42□□□□□ -0.9
CNN3P1-201ENST00000401596 TSPYL4Q9UJ04 414 aa9.42□□□□□ -0.9
CNN3P1-201ENST00000401596 MEGF6O75095 1541 aa9.41□□□□□ -0.9
CNN3P1-201ENST00000401596 COL5A2P05997 1499 aaPredicted RBP9.41□□□□□ -0.9
CNN3P1-201ENST00000401596 MRC1P22897 1456 aa9.41□□□□□ -0.9
CNN3P1-201ENST00000401596 PTPRCP08575 1304 aa9.41□□□□□ -0.9
CNN3P1-201ENST00000401596 RNMTO43148 476 aaKnown RBP9.41□□□□□ -0.9
CNN3P1-201ENST00000401596 ATMINO43313 823 aaPredicted RBP9.41□□□□□ -0.9
CNN3P1-201ENST00000401596 IGHDP01880 384 aa9.41□□□□□ -0.9
CNN3P1-201ENST00000401596 KRT24Q2M2I5 525 aa9.41□□□□□ -0.9
CNN3P1-201ENST00000401596 TNS4Q8IZW8 715 aa9.41□□□□□ -0.9
CNN3P1-201ENST00000401596 TMEM57Q8N5G2 664 aa9.41□□□□□ -0.9
CNN3P1-201ENST00000401596 API5Q9BZZ5 524 aaKnown RBP9.41□□□□□ -0.9
CNN3P1-201ENST00000401596 PCDHB15Q9Y5E8 787 aa9.41□□□□□ -0.9
CNN3P1-201ENST00000401596 VIRMAQ69YN4 1812 aaKnown RBP9.4□□□□□ -0.9
CNN3P1-201ENST00000401596 PARP4Q9UKK3 1724 aaKnown RBP9.4□□□□□ -0.9
CNN3P1-201ENST00000401596 WDR17Q8IZU2 1322 aa9.4□□□□□ -0.9
CNN3P1-201ENST00000401596 ZBTB7BO15156 539 aaPredicted RBP9.4□□□□□ -0.9
CNN3P1-201ENST00000401596 HDAC1Q13547 482 aaPredicted RBP9.4□□□□□ -0.9
CNN3P1-201ENST00000401596 INTS3Q68E01 1043 aaKnown RBP9.4□□□□□ -0.9
CNN3P1-201ENST00000401596 ASTLQ6HA08 431 aaPredicted RBP9.4□□□□□ -0.9
CNN3P1-201ENST00000401596 LGR6Q9HBX8 967 aa9.4□□□□□ -0.9
CNN3P1-201ENST00000401596 SCN11AQ9UI33 1791 aa9.4□□□□□ -0.91
CNN3P1-201ENST00000401596 CACNA1FO60840 1977 aa9.39□□□□□ -0.91
CNN3P1-201ENST00000401596 ELL2O00472 640 aaPredicted RBP9.39□□□□□ -0.91
CNN3P1-201ENST00000401596 EIF4A1P60842 406 aaKnown RBP9.39□□□□□ -0.91
CNN3P1-201ENST00000401596 ZNF530Q6P9A1 599 aaPredicted RBP9.39□□□□□ -0.91
CNN3P1-201ENST00000401596 FTSJ3Q8IY81 847 aaKnown RBP9.39□□□□□ -0.91
CNN3P1-201ENST00000401596 SYT17Q9BSW7 474 aa9.39□□□□□ -0.91
CNN3P1-201ENST00000401596 FHDC1Q9C0D6 1143 aaPredicted RBP9.39□□□□□ -0.91
CNN3P1-201ENST00000401596 CHMP4BQ9H444 224 aaKnown RBP9.39□□□□□ -0.91
CNN3P1-201ENST00000401596 MIS18AQ9NYP9 233 aa9.39□□□□□ -0.91
CNN3P1-201ENST00000401596 METRNQ9UJH8 293 aa9.39□□□□□ -0.91
CNN3P1-201ENST00000401596 KDM6AO15550 1401 aaPredicted RBP9.39□□□□□ -0.91
CNN3P1-201ENST00000401596 N4BP2Q86UW6 1770 aaPredicted RBP9.38□□□□□ -0.91
CNN3P1-201ENST00000401596 CASZ1Q86V15 1759 aa9.38□□□□□ -0.91
CNN3P1-201ENST00000401596 PHKG2P15735 406 aa9.38□□□□□ -0.91
CNN3P1-201ENST00000401596 RASEFQ8IZ41 740 aa9.38□□□□□ -0.91
CNN3P1-201ENST00000401596 KIF12Q96FN5 646 aa9.38□□□□□ -0.91
CNN3P1-201ENST00000401596 RBM19Q9Y4C8 960 aaKnown RBP9.38□□□□□ -0.91
CNN3P1-201ENST00000401596 ZBTB7CA1YPR0 619 aa9.37□□□□□ -0.91
CNN3P1-201ENST00000401596 ZBTB7AO95365 584 aa9.37□□□□□ -0.91
CNN3P1-201ENST00000401596 TATP17735 454 aaPredicted RBP9.37□□□□□ -0.91
CNN3P1-201ENST00000401596 NKX1-1Q15270 411 aaPredicted RBP9.37□□□□□ -0.91
CNN3P1-201ENST00000401596 CHRNA2Q15822 529 aa9.37□□□□□ -0.91
CNN3P1-201ENST00000401596 GPR162Q16538 588 aa9.37□□□□□ -0.91
CNN3P1-201ENST00000401596 C1orf141Q5JVX7 400 aa9.37□□□□□ -0.91
CNN3P1-201ENST00000401596 RAPGEF4Q8WZA2 1011 aa9.37□□□□□ -0.91
CNN3P1-201ENST00000401596 CARD10Q9BWT7 1032 aa9.37□□□□□ -0.91
CNN3P1-201ENST00000401596 SPG7Q9UQ90 795 aa9.37□□□□□ -0.91
CNN3P1-201ENST00000401596 COL14A1Q05707 1796 aaKnown RBP9.37□□□□□ -0.91
CNN3P1-201ENST00000401596 PXDNLA1KZ92 1463 aa9.36□□□□□ -0.91
CNN3P1-201ENST00000401596 CCDC30Q5VVM6 783 aa9.36□□□□□ -0.91
CNN3P1-201ENST00000401596 MPRIPQ6WCQ1 1025 aa9.36□□□□□ -0.91
CNN3P1-201ENST00000401596 ITPRIPQ8IWB1 547 aa9.36□□□□□ -0.91
CNN3P1-201ENST00000401596 SMC5Q8IY18 1101 aa9.36□□□□□ -0.91
CNN3P1-201ENST00000401596 IFNL2Q8IZJ0 200 aa9.36□□□□□ -0.91
CNN3P1-201ENST00000401596 CHMP4AQ9BY43 222 aa9.36□□□□□ -0.91
CNN3P1-201ENST00000401596 RWDD1Q9H446 243 aaPredicted RBP9.36□□□□□ -0.91
CNN3P1-201ENST00000401596 PRDM11Q9NQV5 511 aa9.36□□□□□ -0.91
CNN3P1-201ENST00000401596 NLRP2Q9NX02 1062 aa9.36□□□□□ -0.91
CNN3P1-201ENST00000401596 CYP27B1O15528 508 aa9.35□□□□□ -0.91
CNN3P1-201ENST00000401596 SLC39A7Q92504 469 aa9.35□□□□□ -0.91
CNN3P1-201ENST00000401596 SPOCK2Q92563 424 aa9.35□□□□□ -0.91
CNN3P1-201ENST00000401596 DCAF5Q96JK2 942 aa9.35□□□□□ -0.91
CNN3P1-201ENST00000401596 TRPC6Q9Y210 931 aa9.35□□□□□ -0.91
CNN3P1-201ENST00000401596 IBTKQ9P2D0 1353 aaPredicted RBP9.35□□□□□ -0.91
CNN3P1-201ENST00000401596 NRAPQ86VF7 1730 aa9.34□□□□□ -0.91
CNN3P1-201ENST00000401596 BTBD11A6QL63 1104 aa9.34□□□□□ -0.91
CNN3P1-201ENST00000401596 MAP3K13O43283 966 aa9.34□□□□□ -0.91
CNN3P1-201ENST00000401596 KCNQ3O43525 872 aa9.34□□□□□ -0.91
CNN3P1-201ENST00000401596 HSP90AB1P08238 724 aaKnown RBP9.34□□□□□ -0.91
CNN3P1-201ENST00000401596 C7P10643 843 aa9.34□□□□□ -0.91
CNN3P1-201ENST00000401596 PTGER2P43116 358 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms