RNA–Protein interactions for RNA: ENST00000401408.5

CLHC1-201, Transcript of clathrin heavy chain linker domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLHC1, Length 2,248 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1-201ENST00000401408 CNGB1Q14028 1251 aaPredicted RBP4.99□□□□□ -1.61
CLHC1-201ENST00000401408 PLEKHG6Q3KR16 790 aa4.99□□□□□ -1.61
CLHC1-201ENST00000401408 ZKSCAN2Q63HK3 967 aa4.99□□□□□ -1.61
CLHC1-201ENST00000401408 ABCF1Q8NE71 845 aaKnown RBP eCLIP4.99□□□□□ -1.61
CLHC1-201ENST00000401408 TRIM34Q9BYJ4 488 aa4.99□□□□□ -1.61
CLHC1-201ENST00000401408 PIF1Q9H611 641 aa4.99□□□□□ -1.61
CLHC1-201ENST00000401408 BSDC1Q9NW68 430 aaPredicted RBP4.99□□□□□ -1.61
CLHC1-201ENST00000401408 COL4A3BPQ9Y5P4 624 aa4.99□□□□□ -1.61
CLHC1-201ENST00000401408 WASHC2CQ9Y4E1 1318 aa4.98□□□□□ -1.61
CLHC1-201ENST00000401408 MSH6P52701 1360 aa4.98□□□□□ -1.61
CLHC1-201ENST00000401408 EIF2AK4Q9P2K8 1649 aaKnown RBP4.98□□□□□ -1.61
CLHC1-201ENST00000401408 CEP152O94986 1710 aa4.98□□□□□ -1.61
CLHC1-201ENST00000401408 ANKRD33BA6NCL7 494 aa4.98□□□□□ -1.61
CLHC1-201ENST00000401408 KIF3BO15066 747 aa4.98□□□□□ -1.61
CLHC1-201ENST00000401408 SOX12O15370 315 aa4.98□□□□□ -1.61
CLHC1-201ENST00000401408 DHX16O60231 1041 aaKnown RBP4.98□□□□□ -1.61
CLHC1-201ENST00000401408 C9orf131Q5VYM1 1079 aa4.98□□□□□ -1.61
CLHC1-201ENST00000401408 ZNF467Q7Z7K2 595 aaPredicted RBP4.98□□□□□ -1.61
CLHC1-201ENST00000401408 TSPAN18Q96SJ8 248 aa4.98□□□□□ -1.61
CLHC1-201ENST00000401408 IRF2BPLQ9H1B7 796 aa4.98□□□□□ -1.61
CLHC1-201ENST00000401408 QTRT2Q9H974 415 aaKnown RBP4.98□□□□□ -1.61
CLHC1-201ENST00000401408 IQSEC3Q9UPP2 1182 aaPredicted RBP4.98□□□□□ -1.61
CLHC1-201ENST00000401408 NUB1Q9Y5A7 615 aa4.98□□□□□ -1.61
CLHC1-201ENST00000401408 SPHKAPQ2M3C7 1700 aa4.98□□□□□ -1.61
CLHC1-201ENST00000401408 GOLIM4O00461 696 aa4.97□□□□□ -1.61
CLHC1-201ENST00000401408 GTF2F1P35269 517 aaKnown RBP eCLIP4.97□□□□□ -1.61
CLHC1-201ENST00000401408 LSM11P83369 360 aaKnown RBP eCLIP4.97□□□□□ -1.61
CLHC1-201ENST00000401408 CSPP1Q1MSJ5 1256 aa4.97□□□□□ -1.61
CLHC1-201ENST00000401408 HDGFL1Q5TGJ6 251 aa4.97□□□□□ -1.61
CLHC1-201ENST00000401408 PIK3R5Q8WYR1 880 aa4.97□□□□□ -1.61
CLHC1-201ENST00000401408 BRINP2Q9C0B6 783 aa4.97□□□□□ -1.61
CLHC1-201ENST00000401408 TPX2Q9ULW0 747 aaKnown RBP4.97□□□□□ -1.61
CLHC1-201ENST00000401408 RPGRIP1LQ68CZ1 1315 aa4.97□□□□□ -1.61
CLHC1-201ENST00000401408 CFAP69A5D8W1 941 aa4.97□□□□□ -1.61
CLHC1-201ENST00000401408 ATRNO75882 1429 aa4.97□□□□□ -1.61
CLHC1-201ENST00000401408 S100BP04271 92 aaPredicted RBP4.97□□□□□ -1.61
CLHC1-201ENST00000401408 GTF2E1P29083 439 aaPredicted RBP4.97□□□□□ -1.61
CLHC1-201ENST00000401408 EVA1CP58658 441 aa4.97□□□□□ -1.61
CLHC1-201ENST00000401408 TAGLNQ01995 201 aaKnown RBP4.97□□□□□ -1.61
CLHC1-201ENST00000401408 RNF187Q5TA31 235 aaPredicted RBP4.97□□□□□ -1.61
CLHC1-201ENST00000401408 FMNL3Q8IVF7 1028 aa4.97□□□□□ -1.61
CLHC1-201ENST00000401408 LARP6Q9BRS8 491 aaKnown RBP4.97□□□□□ -1.61
CLHC1-201ENST00000401408 SPC25Q9HBM1 224 aa4.97□□□□□ -1.61
CLHC1-201ENST00000401408 PRKAG2Q9UGJ0 569 aa4.97□□□□□ -1.61
CLHC1-201ENST00000401408 NRBP1Q9UHY1 535 aa4.97□□□□□ -1.61
CLHC1-201ENST00000401408 SH3BP1Q9Y3L3 701 aa4.97□□□□□ -1.61
CLHC1-201ENST00000401408 GOLGA6CA6NDK9 693 aa4.96□□□□□ -1.62
CLHC1-201ENST00000401408 GOLGA6BA6NDN3 693 aa4.96□□□□□ -1.62
CLHC1-201ENST00000401408 GOLGA6DP0CG33 693 aa4.96□□□□□ -1.62
CLHC1-201ENST00000401408 NUBP1P53384 320 aa4.96□□□□□ -1.62
CLHC1-201ENST00000401408 XPCQ01831 940 aaPredicted RBP4.96□□□□□ -1.62
CLHC1-201ENST00000401408 BANK1Q8NDB2 785 aa4.96□□□□□ -1.62
CLHC1-201ENST00000401408 ZSWIM4Q9H7M6 989 aa4.96□□□□□ -1.62
CLHC1-201ENST00000401408 POLR3EQ9NVU0 708 aa4.96□□□□□ -1.62
CLHC1-201ENST00000401408 GOLGA6AQ9NYA3 693 aa4.96□□□□□ -1.62
CLHC1-201ENST00000401408 BRWD3Q6RI45 1802 aa4.96□□□□□ -1.62
CLHC1-201ENST00000401408 UNC13BO14795 1591 aa4.96□□□□□ -1.62
CLHC1-201ENST00000401408 ZNF644Q9H582 1327 aaPredicted RBP4.96□□□□□ -1.62
CLHC1-201ENST00000401408 A0A0G2JS52 829 aa4.96□□□□□ -1.62
CLHC1-201ENST00000401408 HSP90AA1P07900 732 aaKnown RBP4.96□□□□□ -1.62
CLHC1-201ENST00000401408 ATP2B1P20020 1258 aa4.96□□□□□ -1.62
CLHC1-201ENST00000401408 MMP14P50281 582 aa4.96□□□□□ -1.62
CLHC1-201ENST00000401408 MEX3CQ5U5Q3 659 aaKnown RBP4.96□□□□□ -1.62
CLHC1-201ENST00000401408 PMFBP1Q8TBY8 1022 aa4.96□□□□□ -1.62
CLHC1-201ENST00000401408 ADAMTS19Q8TE59 1207 aa4.96□□□□□ -1.62
CLHC1-201ENST00000401408 PPP1R12CQ9BZL4 782 aa4.96□□□□□ -1.62
CLHC1-201ENST00000401408 PCDH12Q9NPG4 1184 aa4.96□□□□□ -1.62
CLHC1-201ENST00000401408 MAP3K20Q9NYL2 800 aaKnown RBP4.96□□□□□ -1.62
CLHC1-201ENST00000401408 EFCAB6Q5THR3 1501 aa4.95□□□□□ -1.62
CLHC1-201ENST00000401408 ASXL1Q8IXJ9 1541 aa4.95□□□□□ -1.62
CLHC1-201ENST00000401408 FYCO1Q9BQS8 1478 aa4.95□□□□□ -1.62
CLHC1-201ENST00000401408 NUTM2BA6NNL0 878 aaPredicted RBP4.95□□□□□ -1.62
CLHC1-201ENST00000401408 NUTM2EB1AL46 878 aaPredicted RBP4.95□□□□□ -1.62
CLHC1-201ENST00000401408 LMOD1P29536 600 aaPredicted RBP4.95□□□□□ -1.62
CLHC1-201ENST00000401408 NBPF20Q3BBV1 942 aa4.95□□□□□ -1.62
CLHC1-201ENST00000401408 NUTM2DQ5VT03 806 aaPredicted RBP4.95□□□□□ -1.62
CLHC1-201ENST00000401408 ZNF787Q6DD87 383 aa4.95□□□□□ -1.62
CLHC1-201ENST00000401408 NUTM2AQ8IVF1 878 aaPredicted RBP4.95□□□□□ -1.62
CLHC1-201ENST00000401408 HELBQ8NG08 1087 aaPredicted RBP4.95□□□□□ -1.62
CLHC1-201ENST00000401408 ARHGEF5Q12774 1597 aa4.95□□□□□ -1.62
CLHC1-201ENST00000401408 CCDC141Q6ZP82 1450 aa4.95□□□□□ -1.62
CLHC1-201ENST00000401408 BLMP54132 1417 aaPredicted RBP4.95□□□□□ -1.62
CLHC1-201ENST00000401408 TNKS1BP1Q9C0C2 1729 aaKnown RBP4.95□□□□□ -1.62
CLHC1-201ENST00000401408 MARF1Q9Y4F3 1742 aaKnown RBP4.95□□□□□ -1.62
CLHC1-201ENST00000401408 PNPLA6Q8IY17 1366 aa4.95□□□□□ -1.62
CLHC1-201ENST00000401408 COL22A1Q8NFW1 1626 aaPredicted RBP4.95□□□□□ -1.62
CLHC1-201ENST00000401408 PRC1O43663 620 aa4.95□□□□□ -1.62
CLHC1-201ENST00000401408 PPP1R37O75864 691 aa4.95□□□□□ -1.62
CLHC1-201ENST00000401408 HDLBPQ00341 1268 aaKnown RBP4.95□□□□□ -1.62
CLHC1-201ENST00000401408 BMS1Q14692 1282 aaKnown RBP4.95□□□□□ -1.62
CLHC1-201ENST00000401408 BRINP3Q76B58 766 aa4.95□□□□□ -1.62
CLHC1-201ENST00000401408 TMC2Q8TDI7 906 aa4.95□□□□□ -1.62
CLHC1-201ENST00000401408 NGLY1Q96IV0 654 aa4.95□□□□□ -1.62
CLHC1-201ENST00000401408 REPIN1Q9BWE0 567 aaKnown RBP4.95□□□□□ -1.62
CLHC1-201ENST00000401408 CFDP1Q9UEE9 299 aaPredicted RBP4.95□□□□□ -1.62
CLHC1-201ENST00000401408 TCEAL9Q9UHQ7 104 aa4.95□□□□□ -1.62
CLHC1-201ENST00000401408 ZFYVE9O95405 1425 aa4.94□□□□□ -1.62
CLHC1-201ENST00000401408 DCCP43146 1447 aa4.94□□□□□ -1.62
CLHC1-201ENST00000401408 GOLGB1Q14789 3259 aaKnown RBP4.94□□□□□ -1.62
CLHC1-201ENST00000401408 ATG7O95352 703 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms