RNA–Protein interactions for RNA: ENST00000400771.7

ATG4B-202, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 663 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-202ENST00000400771 NFE2L2Q16236 605 aa20.53■□□□□ 0.88
ATG4B-202ENST00000400771 KLHL34Q8N239 644 aa20.53■□□□□ 0.88
ATG4B-202ENST00000400771 SRP68Q9UHB9 627 aaKnown RBP20.52■□□□□ 0.88
ATG4B-202ENST00000400771 ANKRD31Q8N7Z5 1873 aa20.52■□□□□ 0.87
ATG4B-202ENST00000400771 PXDNLA1KZ92 1463 aa20.51■□□□□ 0.87
ATG4B-202ENST00000400771 BTBD11A6QL63 1104 aa20.51■□□□□ 0.87
ATG4B-202ENST00000400771 ARFGEF1Q9Y6D6 1849 aa20.5■□□□□ 0.87
ATG4B-202ENST00000400771 MMP10P09238 476 aa20.5■□□□□ 0.87
ATG4B-202ENST00000400771 RTF1Q92541 710 aaKnown RBP20.5■□□□□ 0.87
ATG4B-202ENST00000400771 RFC4P35249 363 aa20.49■□□□□ 0.87
ATG4B-202ENST00000400771 FMNL2Q96PY5 1086 aa20.49■□□□□ 0.87
ATG4B-202ENST00000400771 THUMPD2Q9BTF0 503 aaKnown RBP20.49■□□□□ 0.87
ATG4B-202ENST00000400771 CD2APQ9Y5K6 639 aa20.49■□□□□ 0.87
ATG4B-202ENST00000400771 MAPK8IP3Q9UPT6 1336 aa20.49■□□□□ 0.87
ATG4B-202ENST00000400771 PRAMEF22A3QJZ6 481 aa20.48■□□□□ 0.87
ATG4B-202ENST00000400771 COL11A2P13942 1736 aaPredicted RBP20.47■□□□□ 0.87
ATG4B-202ENST00000400771 FKBP8Q14318 412 aa20.47■□□□□ 0.87
ATG4B-202ENST00000400771 ZNF316A6NFI3 1004 aaPredicted RBP20.46■□□□□ 0.87
ATG4B-202ENST00000400771 EIF5P55010 431 aaKnown RBP20.46■□□□□ 0.87
ATG4B-202ENST00000400771 DDR1Q08345 913 aa20.46■□□□□ 0.87
ATG4B-202ENST00000400771 NLGN1Q8N2Q7 840 aa20.46■□□□□ 0.87
ATG4B-202ENST00000400771 BCL2L12Q9HB09 334 aa20.46■□□□□ 0.87
ATG4B-202ENST00000400771 NEFMP07197 916 aa20.45■□□□□ 0.86
ATG4B-202ENST00000400771 NUP98P52948 1817 aa20.45■□□□□ 0.86
ATG4B-202ENST00000400771 STARD3NLO95772 234 aa20.44■□□□□ 0.86
ATG4B-202ENST00000400771 YBX3P16989 372 aaKnown RBP eCLIP20.44■□□□□ 0.86
ATG4B-202ENST00000400771 TAF7Q15545 349 aaPredicted RBP20.44■□□□□ 0.86
ATG4B-202ENST00000400771 USPL1Q5W0Q7 1092 aa20.44■□□□□ 0.86
ATG4B-202ENST00000400771 CCDC146Q8IYE0 955 aa20.44■□□□□ 0.86
ATG4B-202ENST00000400771 PNNQ9H307 717 aaKnown RBP20.44■□□□□ 0.86
ATG4B-202ENST00000400771 NARFQ9UHQ1 456 aa20.44■□□□□ 0.86
ATG4B-202ENST00000400771 CANXP27824 592 aaKnown RBP20.43■□□□□ 0.86
ATG4B-202ENST00000400771 TMPOP42166 694 aaKnown RBP20.43■□□□□ 0.86
ATG4B-202ENST00000400771 TEX13AQ9BXU3 409 aaPredicted RBP20.43■□□□□ 0.86
ATG4B-202ENST00000400771 MIS18AQ9NYP9 233 aa20.43■□□□□ 0.86
ATG4B-202ENST00000400771 ADAMTS8Q9UP79 889 aa20.42■□□□□ 0.86
ATG4B-202ENST00000400771 USP16Q9Y5T5 823 aa20.42■□□□□ 0.86
ATG4B-202ENST00000400771 POLRMTO00411 1230 aaKnown RBP20.41■□□□□ 0.86
ATG4B-202ENST00000400771 A1BGP04217 495 aa20.41■□□□□ 0.86
ATG4B-202ENST00000400771 CCDC184Q52MB2 194 aa20.41■□□□□ 0.86
ATG4B-202ENST00000400771 CACNA1SQ13698 1873 aa20.41■□□□□ 0.86
ATG4B-202ENST00000400771 TM4SF1P30408 202 aa20.4■□□□□ 0.86
ATG4B-202ENST00000400771 IL6STP40189 918 aaPredicted RBP20.4■□□□□ 0.86
ATG4B-202ENST00000400771 WDR43Q15061 677 aaKnown RBP eCLIP20.4■□□□□ 0.86
ATG4B-202ENST00000400771 ANKRD36CQ5JPF3 1778 aa20.4■□□□□ 0.86
ATG4B-202ENST00000400771 RRP7AQ9Y3A4 280 aaKnown RBP20.4■□□□□ 0.86
ATG4B-202ENST00000400771 ARFGEF2Q9Y6D5 1785 aa20.4■□□□□ 0.86
ATG4B-202ENST00000400771 DCAF8L1A6NGE4 600 aa20.39■□□□□ 0.85
ATG4B-202ENST00000400771 SNRPA1P09661 255 aaKnown RBP20.39■□□□□ 0.85
ATG4B-202ENST00000400771 PIP4K2AP48426 406 aaPredicted RBP20.39■□□□□ 0.85
ATG4B-202ENST00000400771 RIPK4P57078 832 aa20.39■□□□□ 0.85
ATG4B-202ENST00000400771 RUNDC1Q96C34 613 aa20.39■□□□□ 0.85
ATG4B-202ENST00000400771 CARMIL3Q8ND23 1372 aa20.38■□□□□ 0.85
ATG4B-202ENST00000400771 NBPF26B4DH59 902 aa20.38■□□□□ 0.85
ATG4B-202ENST00000400771 ZPR1O75312 459 aa20.38■□□□□ 0.85
ATG4B-202ENST00000400771 EIF4A1P60842 406 aaKnown RBP20.38■□□□□ 0.85
ATG4B-202ENST00000400771 NFIXQ14938 502 aa20.38■□□□□ 0.85
ATG4B-202ENST00000400771 NBPF10Q6P3W6 841 aaKnown RBP20.38■□□□□ 0.85
ATG4B-202ENST00000400771 NBPF15Q8N660 670 aa20.38■□□□□ 0.85
ATG4B-202ENST00000400771 TRIM35Q9UPQ4 493 aa20.38■□□□□ 0.85
ATG4B-202ENST00000400771 PARP3Q9Y6F1 533 aa20.38■□□□□ 0.85
ATG4B-202ENST00000400771 YY1P25490 414 aa20.37■□□□□ 0.85
ATG4B-202ENST00000400771 GPR162Q16538 588 aa20.37■□□□□ 0.85
ATG4B-202ENST00000400771 PNISRQ8TF01 805 aaKnown RBP20.37■□□□□ 0.85
ATG4B-202ENST00000400771 CAMTA2O94983 1202 aa20.36■□□□□ 0.85
ATG4B-202ENST00000400771 PELP1Q8IZL8 1130 aaKnown RBP20.36■□□□□ 0.85
ATG4B-202ENST00000400771 A0A087WZG4 1122 aa20.35■□□□□ 0.85
ATG4B-202ENST00000400771 GIGYF1O75420 1035 aaPredicted RBP20.35■□□□□ 0.85
ATG4B-202ENST00000400771 TNRC6CQ9HCJ0 1690 aaKnown RBP20.35■□□□□ 0.85
ATG4B-202ENST00000400771 LMOD3Q0VAK6 560 aa20.34■□□□□ 0.85
ATG4B-202ENST00000400771 TBC1D2BQ9UPU7 963 aa20.34■□□□□ 0.85
ATG4B-202ENST00000400771 SBF1O95248 1867 aa20.34■□□□□ 0.85
ATG4B-202ENST00000400771 WWC3Q9ULE0 1092 aa20.33■□□□□ 0.85
ATG4B-202ENST00000400771 ZNF330Q9Y3S2 320 aaPredicted RBP20.33■□□□□ 0.85
ATG4B-202ENST00000400771 KCNA3P22001 575 aa20.32■□□□□ 0.84
ATG4B-202ENST00000400771 TGFB2P61812 414 aa20.32■□□□□ 0.84
ATG4B-202ENST00000400771 NEUROD2Q15784 382 aa20.32■□□□□ 0.84
ATG4B-202ENST00000400771 TBC1D9BQ66K14 1250 aa20.32■□□□□ 0.84
ATG4B-202ENST00000400771 TSPYL4Q9UJ04 414 aa20.32■□□□□ 0.84
ATG4B-202ENST00000400771 DPEP1P16444 411 aa20.31■□□□□ 0.84
ATG4B-202ENST00000400771 DZIP3Q86Y13 1208 aaKnown RBP20.31■□□□□ 0.84
ATG4B-202ENST00000400771 BABAM1Q9NWV8 329 aa20.31■□□□□ 0.84
ATG4B-202ENST00000400771 ADCY9O60503 1353 aa20.31■□□□□ 0.84
ATG4B-202ENST00000400771 A0A0G2JLW4 131 aa20.3■□□□□ 0.84
ATG4B-202ENST00000400771 CCDC88AQ3V6T2 1871 aa20.28■□□□□ 0.84
ATG4B-202ENST00000400771 CHL1O00533 1208 aa20.28■□□□□ 0.84
ATG4B-202ENST00000400771 GRIN3BO60391 1043 aa20.28■□□□□ 0.84
ATG4B-202ENST00000400771 SERPINB2P05120 415 aa20.28■□□□□ 0.84
ATG4B-202ENST00000400771 LRP10Q7Z4F1 713 aa20.28■□□□□ 0.84
ATG4B-202ENST00000400771 FER1L6Q2WGJ9 1857 aa20.27■□□□□ 0.84
ATG4B-202ENST00000400771 LAMB2P55268 1798 aa20.27■□□□□ 0.84
ATG4B-202ENST00000400771 APAF1O14727 1248 aa20.27■□□□□ 0.84
ATG4B-202ENST00000400771 BICDL1Q6ZP65 573 aa20.27■□□□□ 0.84
ATG4B-202ENST00000400771 ERBB4Q15303 1308 aa20.27■□□□□ 0.83
ATG4B-202ENST00000400771 CHRNA5P30532 468 aa20.26■□□□□ 0.83
ATG4B-202ENST00000400771 KRT24Q2M2I5 525 aa20.26■□□□□ 0.83
ATG4B-202ENST00000400771 TIAM2Q8IVF5 1701 aa20.26■□□□□ 0.83
ATG4B-202ENST00000400771 ATP10DQ9P241 1426 aa20.26■□□□□ 0.83
ATG4B-202ENST00000400771 SLX4Q8IY92 1834 aa20.25■□□□□ 0.83
ATG4B-202ENST00000400771 RGL2O15211 777 aa20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms