RNA–Protein interactions for RNA: ENST00000400068.7

SIRPA-203, Transcript of signal regulatory protein alpha, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SIRPA, Length 4,201 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPA-203ENST00000400068 LMTK2Q8IWU2 1503 aa16.24■□□□□ 0.19
SIRPA-203ENST00000400068 ABCC4O15439 1325 aa16.24■□□□□ 0.19
SIRPA-203ENST00000400068 KLHDC4Q8TBB5 520 aa16.24■□□□□ 0.19
SIRPA-203ENST00000400068 ZGPATQ8N5A5 531 aaKnown RBP16.23■□□□□ 0.19
SIRPA-203ENST00000400068 NEXMIFQ5QGS0 1516 aa16.23■□□□□ 0.19
SIRPA-203ENST00000400068 A0A087WZG4 1122 aa16.23■□□□□ 0.19
SIRPA-203ENST00000400068 FBXW7Q969H0 707 aa16.23■□□□□ 0.19
SIRPA-203ENST00000400068 FAM135BQ49AJ0 1406 aa16.22■□□□□ 0.19
SIRPA-203ENST00000400068 RNF20Q5VTR2 975 aa16.22■□□□□ 0.19
SIRPA-203ENST00000400068 ZNF853P0CG23 659 aa16.22■□□□□ 0.19
SIRPA-203ENST00000400068 NASPP49321 788 aaPredicted RBP16.22■□□□□ 0.19
SIRPA-203ENST00000400068 AKAP4Q5JQC9 854 aa16.22■□□□□ 0.19
SIRPA-203ENST00000400068 FERMT3Q86UX7 667 aa16.22■□□□□ 0.19
SIRPA-203ENST00000400068 PTPRMP28827 1452 aa16.22■□□□□ 0.19
SIRPA-203ENST00000400068 MRE11P49959 708 aa16.22■□□□□ 0.19
SIRPA-203ENST00000400068 FKBP4Q02790 459 aaKnown RBP eCLIP16.22■□□□□ 0.19
SIRPA-203ENST00000400068 STK11IPQ8N1F8 1099 aa16.22■□□□□ 0.19
SIRPA-203ENST00000400068 ZNF526Q8TF50 670 aaPredicted RBP16.22■□□□□ 0.19
SIRPA-203ENST00000400068 CEBPZQ03701 1054 aaKnown RBP16.21■□□□□ 0.19
SIRPA-203ENST00000400068 PANK2Q9BZ23 570 aa16.21■□□□□ 0.19
SIRPA-203ENST00000400068 LARP1Q6PKG0 1096 aaKnown RBP16.21■□□□□ 0.19
SIRPA-203ENST00000400068 ERC1Q8IUD2 1116 aa16.21■□□□□ 0.19
SIRPA-203ENST00000400068 ADGRB1O14514 1584 aa16.21■□□□□ 0.19
SIRPA-203ENST00000400068 USP6P35125 1406 aa16.21■□□□□ 0.19
SIRPA-203ENST00000400068 GRPEL1Q9HAV7 217 aa16.21■□□□□ 0.18
SIRPA-203ENST00000400068 ATP7BP35670 1465 aa16.2■□□□□ 0.18
SIRPA-203ENST00000400068 FRMPD1Q5SYB0 1578 aa16.2■□□□□ 0.18
SIRPA-203ENST00000400068 PRAMEF22A3QJZ6 481 aa16.2■□□□□ 0.18
SIRPA-203ENST00000400068 GLRX3O76003 335 aaKnown RBP16.2■□□□□ 0.18
SIRPA-203ENST00000400068 CCDC83Q8IWF9 413 aa16.2■□□□□ 0.18
SIRPA-203ENST00000400068 SIRT1Q96EB6 747 aa16.2■□□□□ 0.18
SIRPA-203ENST00000400068 RNMTO43148 476 aaKnown RBP16.2■□□□□ 0.18
SIRPA-203ENST00000400068 CPA1P15085 419 aa16.2■□□□□ 0.18
SIRPA-203ENST00000400068 IFNL2Q8IZJ0 200 aa16.19■□□□□ 0.18
SIRPA-203ENST00000400068 GPTP24298 496 aa16.19■□□□□ 0.18
SIRPA-203ENST00000400068 HYPKQ9NX55 129 aa16.19■□□□□ 0.18
SIRPA-203ENST00000400068 CYP46A1Q9Y6A2 500 aa16.19■□□□□ 0.18
SIRPA-203ENST00000400068 ESYT1Q9BSJ8 1104 aa16.19■□□□□ 0.18
SIRPA-203ENST00000400068 C19orf44Q9H6X5 657 aa16.19■□□□□ 0.18
SIRPA-203ENST00000400068 CIZ1Q9ULV3 898 aaPredicted RBP16.19■□□□□ 0.18
SIRPA-203ENST00000400068 PIK3C2BO00750 1634 aa16.19■□□□□ 0.18
SIRPA-203ENST00000400068 AATKQ6ZMQ8 1374 aa16.19■□□□□ 0.18
SIRPA-203ENST00000400068 SETBP1Q9Y6X0 1596 aa16.18■□□□□ 0.18
SIRPA-203ENST00000400068 RAB11FIP3O75154 756 aa16.18■□□□□ 0.18
SIRPA-203ENST00000400068 CD2BP2O95400 341 aaKnown RBP16.18■□□□□ 0.18
SIRPA-203ENST00000400068 ADAMTS2O95450 1211 aa16.18■□□□□ 0.18
SIRPA-203ENST00000400068 RBM27Q9P2N5 1060 aaKnown RBP16.18■□□□□ 0.18
SIRPA-203ENST00000400068 PLEKHG1Q9ULL1 1385 aa16.18■□□□□ 0.18
SIRPA-203ENST00000400068 USP26Q9BXU7 913 aa16.18■□□□□ 0.18
SIRPA-203ENST00000400068 ANKRD13DQ6ZTN6 518 aa16.18■□□□□ 0.18
SIRPA-203ENST00000400068 MROH1Q8NDA8 1641 aa16.17■□□□□ 0.18
SIRPA-203ENST00000400068 RTL1A6NKG5 1358 aa16.17■□□□□ 0.18
SIRPA-203ENST00000400068 HTATSF1O43719 755 aaKnown RBP16.17■□□□□ 0.18
SIRPA-203ENST00000400068 TMX3Q96JJ7 454 aa16.17■□□□□ 0.18
SIRPA-203ENST00000400068 CHAMP1Q96JM3 812 aa16.17■□□□□ 0.18
SIRPA-203ENST00000400068 USP44Q9H0E7 712 aa16.17■□□□□ 0.18
SIRPA-203ENST00000400068 SNRKQ9NRH2 765 aa16.17■□□□□ 0.18
SIRPA-203ENST00000400068 PDRG1Q9NUG6 133 aa16.17■□□□□ 0.18
SIRPA-203ENST00000400068 BAG4O95429 457 aaKnown RBP16.17■□□□□ 0.18
SIRPA-203ENST00000400068 ECHDC1Q9NTX5 307 aa16.17■□□□□ 0.18
SIRPA-203ENST00000400068 ARHGEF40Q8TER5 1519 aa16.17■□□□□ 0.18
SIRPA-203ENST00000400068 BICD2Q8TD16 824 aa16.17■□□□□ 0.18
SIRPA-203ENST00000400068 KSR2Q6VAB6 950 aa16.16■□□□□ 0.18
SIRPA-203ENST00000400068 FMNL2Q96PY5 1086 aa16.16■□□□□ 0.18
SIRPA-203ENST00000400068 ATP6V1DQ9Y5K8 247 aa16.16■□□□□ 0.18
SIRPA-203ENST00000400068 NDUFB9Q9Y6M9 179 aa16.16■□□□□ 0.18
SIRPA-203ENST00000400068 VWDEQ8N2E2 1590 aa16.16■□□□□ 0.18
SIRPA-203ENST00000400068 DDX11Q96FC9 970 aa16.16■□□□□ 0.18
SIRPA-203ENST00000400068 CWC22Q9HCG8 908 aaKnown RBP16.16■□□□□ 0.18
SIRPA-203ENST00000400068 NRXN1Q9ULB1 1477 aa16.16■□□□□ 0.18
SIRPA-203ENST00000400068 GRM8O00222 908 aa16.16■□□□□ 0.18
SIRPA-203ENST00000400068 MCM2P49736 904 aa16.16■□□□□ 0.18
SIRPA-203ENST00000400068 SF3A1Q15459 793 aaKnown RBP16.16■□□□□ 0.18
SIRPA-203ENST00000400068 PROSER3Q2NL68 480 aa16.16■□□□□ 0.18
SIRPA-203ENST00000400068 SYCE3A1L190 88 aa16.15■□□□□ 0.18
SIRPA-203ENST00000400068 EIF4A1P60842 406 aaKnown RBP16.15■□□□□ 0.18
SIRPA-203ENST00000400068 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.15■□□□□ 0.18
SIRPA-203ENST00000400068 CADPS2Q86UW7 1296 aa16.15■□□□□ 0.18
SIRPA-203ENST00000400068 LRRC7Q96NW7 1537 aa16.15■□□□□ 0.18
SIRPA-203ENST00000400068 NLRP1Q9C000 1473 aa16.15■□□□□ 0.18
SIRPA-203ENST00000400068 PIP4K2BP78356 416 aa16.15■□□□□ 0.18
SIRPA-203ENST00000400068 CCDC57Q2TAC2 916 aa16.15■□□□□ 0.18
SIRPA-203ENST00000400068 BLOC1S2Q6QNY1 142 aa16.15■□□□□ 0.18
SIRPA-203ENST00000400068 CNNM1Q9NRU3 951 aa16.15■□□□□ 0.18
SIRPA-203ENST00000400068 CLTCQ00610 1675 aaKnown RBP16.14■□□□□ 0.17
SIRPA-203ENST00000400068 PNPLA6Q8IY17 1366 aa16.14■□□□□ 0.17
SIRPA-203ENST00000400068 RBM25P49756 843 aaKnown RBP16.14■□□□□ 0.17
SIRPA-203ENST00000400068 KIF6Q6ZMV9 814 aa16.14■□□□□ 0.17
SIRPA-203ENST00000400068 DDX46Q7L014 1031 aaKnown RBP16.14■□□□□ 0.17
SIRPA-203ENST00000400068 CHMLP26374 656 aa16.14■□□□□ 0.17
SIRPA-203ENST00000400068 NECAB1Q8N987 351 aa16.14■□□□□ 0.17
SIRPA-203ENST00000400068 SNRPA1P09661 255 aaKnown RBP16.13■□□□□ 0.17
SIRPA-203ENST00000400068 BICC1Q9H694 974 aaKnown RBP16.13■□□□□ 0.17
SIRPA-203ENST00000400068 SOS1Q07889 1333 aaPredicted RBP16.13■□□□□ 0.17
SIRPA-203ENST00000400068 IGSF1Q8N6C5 1336 aa16.13■□□□□ 0.17
SIRPA-203ENST00000400068 DEPDC5O75140 1603 aa16.13■□□□□ 0.17
SIRPA-203ENST00000400068 CPS1P31327 1500 aa16.13■□□□□ 0.17
SIRPA-203ENST00000400068 LARP1BQ659C4 914 aaKnown RBP16.13■□□□□ 0.17
SIRPA-203ENST00000400068 ISY1Q9ULR0 285 aaKnown RBP16.13■□□□□ 0.17
SIRPA-203ENST00000400068 ARHGEF10O15013 1369 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms