RNA–Protein interactions for RNA: ENST00000399975.7

USP16-203, Transcript of ubiquitin specific peptidase 16, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene USP16, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-203ENST00000399975 DDX21Q9NR30 783 aaKnown RBP eCLIP8.77□□□□□ -1.01
USP16-203ENST00000399975 DBF4Q9UBU7 674 aaPredicted RBP8.77□□□□□ -1.01
USP16-203ENST00000399975 KCNQ2O43526 872 aa8.76□□□□□ -1.01
USP16-203ENST00000399975 LRP10Q7Z4F1 713 aa8.76□□□□□ -1.01
USP16-203ENST00000399975 HYPKQ9NX55 129 aa8.76□□□□□ -1.01
USP16-203ENST00000399975 ZKSCAN2Q63HK3 967 aa8.76□□□□□ -1.01
USP16-203ENST00000399975 SLC4A9Q96Q91 983 aa8.76□□□□□ -1.01
USP16-203ENST00000399975 STK31Q9BXU1 1019 aa8.76□□□□□ -1.01
USP16-203ENST00000399975 API5Q9BZZ5 524 aaKnown RBP8.76□□□□□ -1.01
USP16-203ENST00000399975 QSER1Q2KHR3 1735 aa8.76□□□□□ -1.01
USP16-203ENST00000399975 BCORQ6W2J9 1755 aa8.76□□□□□ -1.01
USP16-203ENST00000399975 ARFGEF2Q9Y6D5 1785 aa8.76□□□□□ -1.01
USP16-203ENST00000399975 ELL2O00472 640 aaPredicted RBP8.75□□□□□ -1.01
USP16-203ENST00000399975 CYP19A1P11511 503 aaPredicted RBP8.75□□□□□ -1.01
USP16-203ENST00000399975 USP16Q9Y5T5 823 aa8.75□□□□□ -1.01
USP16-203ENST00000399975 ABCC4O15439 1325 aa8.75□□□□□ -1.01
USP16-203ENST00000399975 C4BP0C0L5 1744 aa8.75□□□□□ -1.01
USP16-203ENST00000399975 LOC102724428A0A0B4J2F2 783 aa8.75□□□□□ -1.01
USP16-203ENST00000399975 PLSCR1O15162 318 aa8.75□□□□□ -1.01
USP16-203ENST00000399975 RGL2O15211 777 aa8.75□□□□□ -1.01
USP16-203ENST00000399975 SIK1P57059 783 aa8.75□□□□□ -1.01
USP16-203ENST00000399975 AAMPQ13685 434 aa8.75□□□□□ -1.01
USP16-203ENST00000399975 RC3H1Q5TC82 1133 aaKnown RBP8.75□□□□□ -1.01
USP16-203ENST00000399975 ATF7IPQ6VMQ6 1270 aa8.75□□□□□ -1.01
USP16-203ENST00000399975 NOB1Q9ULX3 412 aaKnown RBP8.75□□□□□ -1.01
USP16-203ENST00000399975 CNTNAP4Q9C0A0 1308 aa8.75□□□□□ -1.01
USP16-203ENST00000399975 ATP10DQ9P241 1426 aa8.75□□□□□ -1.01
USP16-203ENST00000399975 PRAMEF22A3QJZ6 481 aa8.74□□□□□ -1.01
USP16-203ENST00000399975 STARD3NLO95772 234 aa8.74□□□□□ -1.01
USP16-203ENST00000399975 SLC4A2P04920 1241 aa8.74□□□□□ -1.01
USP16-203ENST00000399975 SLC27A3Q5K4L6 730 aa8.74□□□□□ -1.01
USP16-203ENST00000399975 SYTL4Q96C24 671 aaPredicted RBP8.74□□□□□ -1.01
USP16-203ENST00000399975 ANKRD36CQ5JPF3 1778 aa8.74□□□□□ -1.01
USP16-203ENST00000399975 CHPF2Q9P2E5 772 aa8.74□□□□□ -1.01
USP16-203ENST00000399975 MYH14Q7Z406 1995 aaKnown RBP8.74□□□□□ -1.01
USP16-203ENST00000399975 TRIM27P14373 513 aa8.73□□□□□ -1.01
USP16-203ENST00000399975 FLIIQ13045 1269 aa8.73□□□□□ -1.01
USP16-203ENST00000399975 DNAJC10Q8IXB1 793 aa8.73□□□□□ -1.01
USP16-203ENST00000399975 TSHZ2Q9NRE2 1034 aa8.73□□□□□ -1.01
USP16-203ENST00000399975 SCN7AQ01118 1682 aa8.73□□□□□ -1.01
USP16-203ENST00000399975 UBR3Q6ZT12 1888 aa8.73□□□□□ -1.01
USP16-203ENST00000399975 NBPF26B4DH59 902 aa8.73□□□□□ -1.01
USP16-203ENST00000399975 PTCD1O75127 700 aaKnown RBP8.73□□□□□ -1.01
USP16-203ENST00000399975 NBPF14Q5TI25 921 aa8.73□□□□□ -1.01
USP16-203ENST00000399975 INTS3Q68E01 1043 aaKnown RBP8.73□□□□□ -1.01
USP16-203ENST00000399975 NBPF10Q6P3W6 841 aaKnown RBP8.73□□□□□ -1.01
USP16-203ENST00000399975 PTF1AQ7RTS3 328 aa8.73□□□□□ -1.01
USP16-203ENST00000399975 NBPF15Q8N660 670 aa8.73□□□□□ -1.01
USP16-203ENST00000399975 RBM42Q9BTD8 480 aaKnown RBP8.73□□□□□ -1.01
USP16-203ENST00000399975 EIF2S2P20042 333 aaKnown RBP8.72□□□□□ -1.01
USP16-203ENST00000399975 ITPK1Q13572 414 aa8.72□□□□□ -1.01
USP16-203ENST00000399975 INTS5Q6P9B9 1019 aaKnown RBP8.72□□□□□ -1.01
USP16-203ENST00000399975 DZIP1LQ8IYY4 767 aaKnown RBP8.72□□□□□ -1.01
USP16-203ENST00000399975 KAT6BQ8WYB5 2073 aa8.72□□□□□ -1.01
USP16-203ENST00000399975 ATP6V1AP38606 617 aa8.72□□□□□ -1.01
USP16-203ENST00000399975 IL6STP40189 918 aaPredicted RBP8.72□□□□□ -1.01
USP16-203ENST00000399975 FAM182BQ5T319 152 aa8.72□□□□□ -1.01
USP16-203ENST00000399975 G2E3Q7L622 706 aa8.72□□□□□ -1.01
USP16-203ENST00000399975 BCL2L13Q9BXK5 485 aa8.72□□□□□ -1.01
USP16-203ENST00000399975 PROSER3Q2NL68 480 aa8.71□□□□□ -1.01
USP16-203ENST00000399975 CCDC125Q86Z20 511 aa8.71□□□□□ -1.01
USP16-203ENST00000399975 CCDC87Q9NVE4 849 aa8.71□□□□□ -1.01
USP16-203ENST00000399975 ADCY9O60503 1353 aa8.71□□□□□ -1.01
USP16-203ENST00000399975 TRIM37O94972 964 aa8.71□□□□□ -1.02
USP16-203ENST00000399975 DDX58O95786 925 aaKnown RBP8.71□□□□□ -1.02
USP16-203ENST00000399975 NEFLP07196 543 aa8.71□□□□□ -1.02
USP16-203ENST00000399975 KSR2Q6VAB6 950 aa8.71□□□□□ -1.02
USP16-203ENST00000399975 C4AP0C0L4 1744 aa8.71□□□□□ -1.02
USP16-203ENST00000399975 PLIN1O60240 522 aa8.7□□□□□ -1.02
USP16-203ENST00000399975 CCT4P50991 539 aaKnown RBP8.7□□□□□ -1.02
USP16-203ENST00000399975 MVPQ14764 893 aaKnown RBP8.7□□□□□ -1.02
USP16-203ENST00000399975 LINC00116Q8NCU8 138 aa8.7□□□□□ -1.02
USP16-203ENST00000399975 CHMP4BQ9H444 224 aaKnown RBP8.7□□□□□ -1.02
USP16-203ENST00000399975 PHAXQ9H814 394 aaKnown RBP8.7□□□□□ -1.02
USP16-203ENST00000399975 NUP98P52948 1817 aa8.7□□□□□ -1.02
USP16-203ENST00000399975 AFDNP55196 1824 aaKnown RBP8.7□□□□□ -1.02
USP16-203ENST00000399975 TUBGCP6Q96RT7 1819 aa8.7□□□□□ -1.02
USP16-203ENST00000399975 A1BGP04217 495 aa8.7□□□□□ -1.02
USP16-203ENST00000399975 CANXP27824 592 aaKnown RBP8.7□□□□□ -1.02
USP16-203ENST00000399975 CRKLP46109 303 aaKnown RBP8.7□□□□□ -1.02
USP16-203ENST00000399975 EIF5P55010 431 aaKnown RBP8.7□□□□□ -1.02
USP16-203ENST00000399975 PLBD2Q8NHP8 589 aa8.7□□□□□ -1.02
USP16-203ENST00000399975 FRAT1Q92837 279 aaPredicted RBP8.7□□□□□ -1.02
USP16-203ENST00000399975 CCNL1Q9UK58 526 aaPredicted RBP8.7□□□□□ -1.02
USP16-203ENST00000399975 A0A087WZG4 1122 aa8.7□□□□□ -1.02
USP16-203ENST00000399975 ERVV-1B6SEH8 477 aa8.7□□□□□ -1.02
USP16-203ENST00000399975 RLBP1P12271 317 aa8.7□□□□□ -1.02
USP16-203ENST00000399975 C20orf194Q5TEA3 1177 aa8.7□□□□□ -1.02
USP16-203ENST00000399975 ANP32EQ9BTT0 268 aa8.7□□□□□ -1.02
USP16-203ENST00000399975 XAGE3Q8WTP9 111 aa8.69□□□□□ -1.02
USP16-203ENST00000399975 TCERG1O14776 1098 aaKnown RBP8.69□□□□□ -1.02
USP16-203ENST00000399975 RPS6KA4O75676 772 aa8.69□□□□□ -1.02
USP16-203ENST00000399975 ALDH1L1O75891 902 aa8.69□□□□□ -1.02
USP16-203ENST00000399975 DNAAF4Q8WXU2 420 aa8.69□□□□□ -1.02
USP16-203ENST00000399975 NECTIN2Q92692 538 aa8.69□□□□□ -1.02
USP16-203ENST00000399975 DDX19BQ9UMR2 479 aa8.69□□□□□ -1.02
USP16-203ENST00000399975 COL24A1Q17RW2 1714 aa8.69□□□□□ -1.02
USP16-203ENST00000399975 COL15A1P39059 1388 aa8.68□□□□□ -1.02
USP16-203ENST00000399975 ADRA2BP18089 450 aa8.68□□□□□ -1.02
USP16-203ENST00000399975 COPS6Q7L5N1 327 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms