RNA–Protein interactions for RNA: ENST00000399637.5

CACNA1C-215, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,568 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-215ENST00000399637 GPTP24298 496 aa12.85□□□□□ -0.35
CACNA1C-215ENST00000399637 KCNH5Q8NCM2 988 aa12.85□□□□□ -0.35
CACNA1C-215ENST00000399637 ZNF692Q9BU19 519 aaPredicted RBP12.85□□□□□ -0.35
CACNA1C-215ENST00000399637 K7ELQ4 463 aaPredicted RBP12.85□□□□□ -0.35
CACNA1C-215ENST00000399637 KCNA4P22459 653 aa12.85□□□□□ -0.35
CACNA1C-215ENST00000399637 LMTK3Q96Q04 1460 aa12.84□□□□□ -0.35
CACNA1C-215ENST00000399637 IMMTQ16891 758 aaKnown RBP12.84□□□□□ -0.35
CACNA1C-215ENST00000399637 HLA-DOAP06340 250 aa12.84□□□□□ -0.35
CACNA1C-215ENST00000399637 KRT32Q14532 448 aa12.84□□□□□ -0.35
CACNA1C-215ENST00000399637 MAP2K1Q02750 393 aaPredicted RBP12.84□□□□□ -0.35
CACNA1C-215ENST00000399637 NBPF6Q5VWK0 638 aa12.84□□□□□ -0.35
CACNA1C-215ENST00000399637 NBPF5PQ86XG9 351 aaPredicted RBP12.84□□□□□ -0.35
CACNA1C-215ENST00000399637 NBPF4Q96M43 638 aa12.84□□□□□ -0.35
CACNA1C-215ENST00000399637 UPF3BQ9BZI7 483 aaKnown RBP12.84□□□□□ -0.35
CACNA1C-215ENST00000399637 CEBPAP49715 358 aaPredicted RBP12.84□□□□□ -0.35
CACNA1C-215ENST00000399637 SPOUT1Q5T280 376 aaKnown RBP12.83□□□□□ -0.36
CACNA1C-215ENST00000399637 CCDC102AQ96A19 550 aa12.83□□□□□ -0.36
CACNA1C-215ENST00000399637 JAKMIP1Q96N16 626 aaKnown RBP12.83□□□□□ -0.36
CACNA1C-215ENST00000399637 CABP1Q9NZU7 370 aa12.83□□□□□ -0.36
CACNA1C-215ENST00000399637 NCOA1Q15788 1441 aa12.83□□□□□ -0.36
CACNA1C-215ENST00000399637 PPP2R1AP30153 589 aa12.83□□□□□ -0.36
CACNA1C-215ENST00000399637 RBM10P98175 930 aaKnown RBP12.83□□□□□ -0.36
CACNA1C-215ENST00000399637 FOXO3O43524 673 aa12.83□□□□□ -0.36
CACNA1C-215ENST00000399637 PKNOX2Q96KN3 472 aa12.83□□□□□ -0.36
CACNA1C-215ENST00000399637 NUP62CLQ9H1M0 184 aa12.83□□□□□ -0.36
CACNA1C-215ENST00000399637 SPA17Q15506 151 aa12.82□□□□□ -0.36
CACNA1C-215ENST00000399637 USHBP1Q8N6Y0 703 aa12.82□□□□□ -0.36
CACNA1C-215ENST00000399637 TMCO5BA8MYB1 307 aa12.82□□□□□ -0.36
CACNA1C-215ENST00000399637 SLC5A1P13866 664 aa12.82□□□□□ -0.36
CACNA1C-215ENST00000399637 USP8P40818 1118 aa12.82□□□□□ -0.36
CACNA1C-215ENST00000399637 RRS1Q15050 365 aaKnown RBP12.82□□□□□ -0.36
CACNA1C-215ENST00000399637 MSH6P52701 1360 aa12.82□□□□□ -0.36
CACNA1C-215ENST00000399637 ZBTB24O43167 697 aaPredicted RBP12.81□□□□□ -0.36
CACNA1C-215ENST00000399637 FKBP15Q5T1M5 1219 aa12.81□□□□□ -0.36
CACNA1C-215ENST00000399637 CWC27Q6UX04 472 aaKnown RBP12.81□□□□□ -0.36
CACNA1C-215ENST00000399637 KRT28Q7Z3Y7 464 aa12.81□□□□□ -0.36
CACNA1C-215ENST00000399637 BICD1Q96G01 975 aa12.81□□□□□ -0.36
CACNA1C-215ENST00000399637 NUTM1Q86Y26 1132 aa12.81□□□□□ -0.36
CACNA1C-215ENST00000399637 PRG4Q92954 1404 aaPredicted RBP12.81□□□□□ -0.36
CACNA1C-215ENST00000399637 ERICH4A6NGS2 130 aa12.81□□□□□ -0.36
CACNA1C-215ENST00000399637 UTP14AQ9BVJ6 771 aaKnown RBP12.81□□□□□ -0.36
CACNA1C-215ENST00000399637 GAPVD1Q14C86 1478 aa12.8□□□□□ -0.36
CACNA1C-215ENST00000399637 A0A087WZG4 1122 aa12.8□□□□□ -0.36
CACNA1C-215ENST00000399637 TSR2Q969E8 191 aaKnown RBP12.8□□□□□ -0.36
CACNA1C-215ENST00000399637 RANBP6O60518 1105 aaKnown RBP12.8□□□□□ -0.36
CACNA1C-215ENST00000399637 ZWINTO95229 277 aa12.8□□□□□ -0.36
CACNA1C-215ENST00000399637 MYD88Q99836 296 aa12.8□□□□□ -0.36
CACNA1C-215ENST00000399637 PUF60Q9UHX1 559 aaKnown RBP12.8□□□□□ -0.36
CACNA1C-215ENST00000399637 KIF20AO95235 890 aa12.8□□□□□ -0.36
CACNA1C-215ENST00000399637 TRERF1Q96PN7 1200 aa12.8□□□□□ -0.36
CACNA1C-215ENST00000399637 ARHGAP29Q52LW3 1261 aa12.8□□□□□ -0.36
CACNA1C-215ENST00000399637 RAD54L2Q9Y4B4 1467 aa12.8□□□□□ -0.36
CACNA1C-215ENST00000399637 CCDC178Q5BJE1 867 aa12.8□□□□□ -0.36
CACNA1C-215ENST00000399637 CCDC113Q9H0I3 377 aa12.8□□□□□ -0.36
CACNA1C-215ENST00000399637 VAT1LQ9HCJ6 419 aa12.8□□□□□ -0.36
CACNA1C-215ENST00000399637 CASQ1P31415 396 aa12.79□□□□□ -0.36
CACNA1C-215ENST00000399637 SMC1AQ14683 1233 aaKnown RBP12.79□□□□□ -0.36
CACNA1C-215ENST00000399637 AKAP2Q9Y2D5 859 aa12.79□□□□□ -0.36
CACNA1C-215ENST00000399637 NAIPQ13075 1403 aa12.79□□□□□ -0.36
CACNA1C-215ENST00000399637 ANKRD50Q9ULJ7 1429 aa12.79□□□□□ -0.36
CACNA1C-215ENST00000399637 CFTRP13569 1480 aa12.79□□□□□ -0.36
CACNA1C-215ENST00000399637 PDE3AQ14432 1141 aa12.79□□□□□ -0.36
CACNA1C-215ENST00000399637 CCDC117Q8IWD4 279 aaPredicted RBP12.79□□□□□ -0.36
CACNA1C-215ENST00000399637 GOPCQ9HD26 462 aa12.79□□□□□ -0.36
CACNA1C-215ENST00000399637 SRGAP3O43295 1099 aa12.79□□□□□ -0.36
CACNA1C-215ENST00000399637 BCAR3O75815 825 aa12.79□□□□□ -0.36
CACNA1C-215ENST00000399637 FGFR1OPO95684 399 aaKnown RBP12.79□□□□□ -0.36
CACNA1C-215ENST00000399637 ATP6V1AP38606 617 aa12.79□□□□□ -0.36
CACNA1C-215ENST00000399637 CHD1LQ86WJ1 897 aa12.79□□□□□ -0.36
CACNA1C-215ENST00000399637 SETDB2Q96T68 719 aa12.79□□□□□ -0.36
CACNA1C-215ENST00000399637 GCOM1H8Y6P7 765 aaPredicted RBP12.78□□□□□ -0.36
CACNA1C-215ENST00000399637 MYZAPP0CAP1 466 aa12.78□□□□□ -0.36
CACNA1C-215ENST00000399637 UBE4AQ14139 1066 aa12.78□□□□□ -0.36
CACNA1C-215ENST00000399637 VPS36Q86VN1 386 aa12.78□□□□□ -0.36
CACNA1C-215ENST00000399637 GBP3Q9H0R5 595 aa12.78□□□□□ -0.36
CACNA1C-215ENST00000399637 NCBP1Q09161 790 aaKnown RBP12.78□□□□□ -0.36
CACNA1C-215ENST00000399637 CACNA2D4Q7Z3S7 1137 aa12.78□□□□□ -0.36
CACNA1C-215ENST00000399637 PHAXQ9H814 394 aaKnown RBP12.78□□□□□ -0.36
CACNA1C-215ENST00000399637 CFAP70Q5T0N1 1121 aa12.78□□□□□ -0.36
CACNA1C-215ENST00000399637 PPM1EQ8WY54 764 aa12.78□□□□□ -0.36
CACNA1C-215ENST00000399637 SHTN1A0MZ66 631 aa12.78□□□□□ -0.36
CACNA1C-215ENST00000399637 PDIA4P13667 645 aaKnown RBP12.78□□□□□ -0.36
CACNA1C-215ENST00000399637 IFIT5Q13325 482 aaKnown RBP12.78□□□□□ -0.36
CACNA1C-215ENST00000399637 LARP1Q6PKG0 1096 aaKnown RBP12.78□□□□□ -0.36
CACNA1C-215ENST00000399637 PPP1R42Q7Z4L9 355 aa12.78□□□□□ -0.36
CACNA1C-215ENST00000399637 BIVM-ERCC5R4GMW8 1640 aa12.77□□□□□ -0.36
CACNA1C-215ENST00000399637 NLRP5P59047 1200 aa12.77□□□□□ -0.36
CACNA1C-215ENST00000399637 KIF22Q14807 665 aa12.77□□□□□ -0.36
CACNA1C-215ENST00000399637 CFAP100Q494V2 611 aa12.77□□□□□ -0.36
CACNA1C-215ENST00000399637 APBB1IPQ7Z5R6 666 aaPredicted RBP12.77□□□□□ -0.36
CACNA1C-215ENST00000399637 CTNNBL1Q8WYA6 563 aaPredicted RBP12.77□□□□□ -0.36
CACNA1C-215ENST00000399637 ANKRD18BA2A2Z9 1011 aa12.77□□□□□ -0.36
CACNA1C-215ENST00000399637 CASTP20810 708 aaKnown RBP12.77□□□□□ -0.36
CACNA1C-215ENST00000399637 TMEM266Q2M3C6 531 aa12.77□□□□□ -0.36
CACNA1C-215ENST00000399637 MPNDQ8N594 471 aa12.77□□□□□ -0.36
CACNA1C-215ENST00000399637 BRPF3Q9ULD4 1205 aa12.77□□□□□ -0.36
CACNA1C-215ENST00000399637 TCIRG1Q13488 830 aa12.77□□□□□ -0.37
CACNA1C-215ENST00000399637 GPATCH11Q8N954 259 aa12.77□□□□□ -0.37
CACNA1C-215ENST00000399637 MCM3P25205 808 aa12.77□□□□□ -0.37
CACNA1C-215ENST00000399637 CHRNA2Q15822 529 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms