RNA–Protein interactions for RNA: ENST00000398989.2

TUBA4A-203, Transcript of tubulin alpha 4a, humanhuman

TSL 3

Gene TUBA4A, Length 615 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA4A-203ENST00000398989 RUNDC1Q96C34 613 aa18.4■□□□□ 0.54
TUBA4A-203ENST00000398989 MIS18AQ9NYP9 233 aa18.4■□□□□ 0.54
TUBA4A-203ENST00000398989 RRP7AQ9Y3A4 280 aaKnown RBP18.4■□□□□ 0.54
TUBA4A-203ENST00000398989 SOS1Q07889 1333 aaPredicted RBP18.4■□□□□ 0.54
TUBA4A-203ENST00000398989 CANXP27824 592 aaKnown RBP18.39■□□□□ 0.53
TUBA4A-203ENST00000398989 TEX13AQ9BXU3 409 aaPredicted RBP18.39■□□□□ 0.53
TUBA4A-203ENST00000398989 GOLGB1Q14789 3259 aaKnown RBP18.39■□□□□ 0.53
TUBA4A-203ENST00000398989 UTRNP46939 3433 aa18.39■□□□□ 0.53
TUBA4A-203ENST00000398989 GYS1P13807 737 aa18.38■□□□□ 0.53
TUBA4A-203ENST00000398989 NEUROD2Q15784 382 aa18.38■□□□□ 0.53
TUBA4A-203ENST00000398989 SRP68Q9UHB9 627 aaKnown RBP18.38■□□□□ 0.53
TUBA4A-203ENST00000398989 COL15A1P39059 1388 aa18.38■□□□□ 0.53
TUBA4A-203ENST00000398989 DCAF8L1A6NGE4 600 aa18.37■□□□□ 0.53
TUBA4A-203ENST00000398989 MMP10P09238 476 aa18.37■□□□□ 0.53
TUBA4A-203ENST00000398989 LMOD3Q0VAK6 560 aa18.37■□□□□ 0.53
TUBA4A-203ENST00000398989 CCDC184Q52MB2 194 aa18.37■□□□□ 0.53
TUBA4A-203ENST00000398989 NLGN1Q8N2Q7 840 aa18.37■□□□□ 0.53
TUBA4A-203ENST00000398989 USP42Q9H9J4 1324 aaKnown RBP18.37■□□□□ 0.53
TUBA4A-203ENST00000398989 PRAMEF22A3QJZ6 481 aa18.36■□□□□ 0.53
TUBA4A-203ENST00000398989 LAMB4A4D0S4 1761 aa18.36■□□□□ 0.53
TUBA4A-203ENST00000398989 PNISRQ8TF01 805 aaKnown RBP18.36■□□□□ 0.53
TUBA4A-203ENST00000398989 ZPR1O75312 459 aa18.35■□□□□ 0.53
TUBA4A-203ENST00000398989 SNRPA1P09661 255 aaKnown RBP18.35■□□□□ 0.53
TUBA4A-203ENST00000398989 NLGN2Q8NFZ4 835 aa18.35■□□□□ 0.53
TUBA4A-203ENST00000398989 USP16Q9Y5T5 823 aa18.35■□□□□ 0.53
TUBA4A-203ENST00000398989 A1BGP04217 495 aa18.34■□□□□ 0.53
TUBA4A-203ENST00000398989 ZNF330Q9Y3S2 320 aaPredicted RBP18.34■□□□□ 0.53
TUBA4A-203ENST00000398989 EIF5P55010 431 aaKnown RBP18.33■□□□□ 0.52
TUBA4A-203ENST00000398989 FKBP8Q14318 412 aa18.33■□□□□ 0.52
TUBA4A-203ENST00000398989 USPL1Q5W0Q7 1092 aa18.33■□□□□ 0.52
TUBA4A-203ENST00000398989 NARFQ9UHQ1 456 aa18.33■□□□□ 0.52
TUBA4A-203ENST00000398989 CD2APQ9Y5K6 639 aa18.33■□□□□ 0.52
TUBA4A-203ENST00000398989 MRS2Q9HD23 443 aa18.32■□□□□ 0.52
TUBA4A-203ENST00000398989 TSPYL4Q9UJ04 414 aa18.32■□□□□ 0.52
TUBA4A-203ENST00000398989 TRIM35Q9UPQ4 493 aa18.32■□□□□ 0.52
TUBA4A-203ENST00000398989 KIF13BQ9NQT8 1826 aa18.32■□□□□ 0.52
TUBA4A-203ENST00000398989 SCN7AQ01118 1682 aa18.31■□□□□ 0.52
TUBA4A-203ENST00000398989 A0A087WZG4 1122 aa18.31■□□□□ 0.52
TUBA4A-203ENST00000398989 IL6STP40189 918 aaPredicted RBP18.31■□□□□ 0.52
TUBA4A-203ENST00000398989 PIP4K2AP48426 406 aaPredicted RBP18.31■□□□□ 0.52
TUBA4A-203ENST00000398989 EIF4A1P60842 406 aaKnown RBP18.31■□□□□ 0.52
TUBA4A-203ENST00000398989 PARP3Q9Y6F1 533 aa18.31■□□□□ 0.52
TUBA4A-203ENST00000398989 APAF1O14727 1248 aa18.3■□□□□ 0.52
TUBA4A-203ENST00000398989 NPM2Q86SE8 214 aaKnown RBP18.3■□□□□ 0.52
TUBA4A-203ENST00000398989 GIGYF1O75420 1035 aaPredicted RBP18.29■□□□□ 0.52
TUBA4A-203ENST00000398989 PELP1Q8IZL8 1130 aaKnown RBP18.29■□□□□ 0.52
TUBA4A-203ENST00000398989 BCORQ6W2J9 1755 aa18.29■□□□□ 0.52
TUBA4A-203ENST00000398989 DDR1Q08345 913 aa18.28■□□□□ 0.52
TUBA4A-203ENST00000398989 GPR162Q16538 588 aa18.28■□□□□ 0.52
TUBA4A-203ENST00000398989 BCL2L12Q9HB09 334 aa18.28■□□□□ 0.52
TUBA4A-203ENST00000398989 TBC1D2BQ9UPU7 963 aa18.28■□□□□ 0.52
TUBA4A-203ENST00000398989 AFDNP55196 1824 aaKnown RBP18.28■□□□□ 0.52
TUBA4A-203ENST00000398989 N4BP2Q86UW6 1770 aaPredicted RBP18.27■□□□□ 0.52
TUBA4A-203ENST00000398989 C10orf71Q711Q0 1435 aa18.27■□□□□ 0.52
TUBA4A-203ENST00000398989 BABAM1Q9NWV8 329 aa18.27■□□□□ 0.52
TUBA4A-203ENST00000398989 LAS1LQ9Y4W2 734 aaKnown RBP18.27■□□□□ 0.52
TUBA4A-203ENST00000398989 KIAA1551Q9HCM1 1747 aa18.26■□□□□ 0.51
TUBA4A-203ENST00000398989 NBPF26B4DH59 902 aa18.26■□□□□ 0.51
TUBA4A-203ENST00000398989 TM4SF1P30408 202 aa18.26■□□□□ 0.51
TUBA4A-203ENST00000398989 NBPF10Q6P3W6 841 aaKnown RBP18.26■□□□□ 0.51
TUBA4A-203ENST00000398989 NBPF15Q8N660 670 aa18.26■□□□□ 0.51
TUBA4A-203ENST00000398989 POLRMTO00411 1230 aaKnown RBP18.25■□□□□ 0.51
TUBA4A-203ENST00000398989 NFIXQ14938 502 aa18.25■□□□□ 0.51
TUBA4A-203ENST00000398989 DZIP3Q86Y13 1208 aaKnown RBP18.25■□□□□ 0.51
TUBA4A-203ENST00000398989 NRXN2Q9P2S2 1712 aa18.24■□□□□ 0.51
TUBA4A-203ENST00000398989 CHD4Q14839 1912 aa18.24■□□□□ 0.51
TUBA4A-203ENST00000398989 CHL1O00533 1208 aa18.24■□□□□ 0.51
TUBA4A-203ENST00000398989 PXDNLA1KZ92 1463 aa18.23■□□□□ 0.51
TUBA4A-203ENST00000398989 SENP3-EIF4A1A0A087X0R7 540 aa18.23■□□□□ 0.51
TUBA4A-203ENST00000398989 CAMTA2O94983 1202 aa18.23■□□□□ 0.51
TUBA4A-203ENST00000398989 BICDL1Q6ZP65 573 aa18.23■□□□□ 0.51
TUBA4A-203ENST00000398989 WWC3Q9ULE0 1092 aa18.23■□□□□ 0.51
TUBA4A-203ENST00000398989 YBX3P16989 372 aaKnown RBP eCLIP18.22■□□□□ 0.517e-7■■■□□ 16.6
TUBA4A-203ENST00000398989 TBC1D9BQ66K14 1250 aa18.22■□□□□ 0.51
TUBA4A-203ENST00000398989 TGFB2P61812 414 aa18.21■□□□□ 0.51
TUBA4A-203ENST00000398989 NGEFQ8N5V2 710 aa18.21■□□□□ 0.51
TUBA4A-203ENST00000398989 CFAP44Q96MT7 982 aa18.21■□□□□ 0.51
TUBA4A-203ENST00000398989 BRCA1P38398 1863 aaKnown RBP18.2■□□□□ 0.5
TUBA4A-203ENST00000398989 A0A0G2JLW4 131 aa18.2■□□□□ 0.5
TUBA4A-203ENST00000398989 SERPINB2P05120 415 aa18.2■□□□□ 0.5
TUBA4A-203ENST00000398989 MYL6BP14649 208 aa18.2■□□□□ 0.5
TUBA4A-203ENST00000398989 EIF2S2P20042 333 aaKnown RBP18.2■□□□□ 0.5
TUBA4A-203ENST00000398989 CALD1Q05682 793 aaKnown RBP18.2■□□□□ 0.5
TUBA4A-203ENST00000398989 YY1P25490 414 aa18.19■□□□□ 0.5
TUBA4A-203ENST00000398989 KRT24Q2M2I5 525 aa18.19■□□□□ 0.5
TUBA4A-203ENST00000398989 MBIPQ9NS73 344 aa18.19■□□□□ 0.5
TUBA4A-203ENST00000398989 NUP98P52948 1817 aa18.19■□□□□ 0.5
TUBA4A-203ENST00000398989 CARMIL3Q8ND23 1372 aa18.18■□□□□ 0.5
TUBA4A-203ENST00000398989 DPEP1P16444 411 aa18.18■□□□□ 0.5
TUBA4A-203ENST00000398989 FAM9BQ8IZU0 186 aa18.18■□□□□ 0.5
TUBA4A-203ENST00000398989 SETDB2Q96T68 719 aa18.18■□□□□ 0.5
TUBA4A-203ENST00000398989 IFT57Q9NWB7 429 aa18.18■□□□□ 0.5
TUBA4A-203ENST00000398989 ZNF652Q9Y2D9 606 aa18.18■□□□□ 0.5
TUBA4A-203ENST00000398989 ERBB4Q15303 1308 aa18.18■□□□□ 0.5
TUBA4A-203ENST00000398989 GRIN3BO60391 1043 aa18.17■□□□□ 0.5
TUBA4A-203ENST00000398989 ZNF853P0CG23 659 aa18.17■□□□□ 0.5
TUBA4A-203ENST00000398989 GNAI1P63096 354 aa18.17■□□□□ 0.5
TUBA4A-203ENST00000398989 CLEC4GQ6UXB4 293 aa18.17■□□□□ 0.5
TUBA4A-203ENST00000398989 NECTIN2Q92692 538 aa18.17■□□□□ 0.5
TUBA4A-203ENST00000398989 ANKRD31Q8N7Z5 1873 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 222.3 ms