RNA–Protein interactions for RNA: ENST00000397709.1

MAP1LC3A-203, Transcript of microtubule associated protein 1 light chain 3 alpha, humanhuman

APPRIS P1 TSL 3 BASIC

Gene MAP1LC3A, Length 698 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3A-203ENST00000397709 EIF2S2P20042 333 aaKnown RBP25.07■■□□□ 1.6
MAP1LC3A-203ENST00000397709 EN1Q05925 392 aaPredicted RBP25.07■■□□□ 1.6
MAP1LC3A-203ENST00000397709 LINC00116Q8NCU8 138 aa25.07■■□□□ 1.6
MAP1LC3A-203ENST00000397709 STARD3NLO95772 234 aa25.06■■□□□ 1.6
MAP1LC3A-203ENST00000397709 CHMP4AQ9BY43 222 aa25.06■■□□□ 1.6
MAP1LC3A-203ENST00000397709 EZH2Q15910 746 aaKnown RBP25.05■■□□□ 1.6
MAP1LC3A-203ENST00000397709 CCDC30Q5VVM6 783 aa25.05■■□□□ 1.6
MAP1LC3A-203ENST00000397709 DEFB132Q7Z7B7 95 aa25.05■■□□□ 1.6
MAP1LC3A-203ENST00000397709 C4BP0C0L5 1744 aa25.04■■□□□ 1.6
MAP1LC3A-203ENST00000397709 NECTIN2Q92692 538 aa25.04■■□□□ 1.6
MAP1LC3A-203ENST00000397709 ERBB4Q15303 1308 aa25.04■■□□□ 1.6
MAP1LC3A-203ENST00000397709 CNTNAP4Q9C0A0 1308 aa25.04■■□□□ 1.6
MAP1LC3A-203ENST00000397709 ALDH1L2Q3SY69 923 aa25.03■■□□□ 1.6
MAP1LC3A-203ENST00000397709 MYH14Q7Z406 1995 aaKnown RBP25.03■■□□□ 1.6
MAP1LC3A-203ENST00000397709 RARSP54136 660 aaKnown RBP25.02■■□□□ 1.6
MAP1LC3A-203ENST00000397709 NUP188Q5SRE5 1749 aa25.01■■□□□ 1.59
MAP1LC3A-203ENST00000397709 A1BGP04217 495 aa25.01■■□□□ 1.59
MAP1LC3A-203ENST00000397709 HMGB2P26583 209 aaKnown RBP25.01■■□□□ 1.59
MAP1LC3A-203ENST00000397709 CRKLP46109 303 aaKnown RBP25.01■■□□□ 1.59
MAP1LC3A-203ENST00000397709 PDIA6Q15084 440 aa25.01■■□□□ 1.59
MAP1LC3A-203ENST00000397709 SSH1Q8WYL5 1049 aa25.01■■□□□ 1.59
MAP1LC3A-203ENST00000397709 CHPF2Q9P2E5 772 aa25.01■■□□□ 1.59
MAP1LC3A-203ENST00000397709 CACNA1FO60840 1977 aa25.01■■□□□ 1.59
MAP1LC3A-203ENST00000397709 NBPF26B4DH59 902 aa25■■□□□ 1.59
MAP1LC3A-203ENST00000397709 TCERG1O14776 1098 aaKnown RBP25■■□□□ 1.59
MAP1LC3A-203ENST00000397709 RC3H1Q5TC82 1133 aaKnown RBP25■■□□□ 1.59
MAP1LC3A-203ENST00000397709 NBPF14Q5TI25 921 aa25■■□□□ 1.59
MAP1LC3A-203ENST00000397709 NBPF10Q6P3W6 841 aaKnown RBP25■■□□□ 1.59
MAP1LC3A-203ENST00000397709 INTS5Q6P9B9 1019 aaKnown RBP25■■□□□ 1.59
MAP1LC3A-203ENST00000397709 NBPF15Q8N660 670 aa25■■□□□ 1.59
MAP1LC3A-203ENST00000397709 CCDC87Q9NVE4 849 aa25■■□□□ 1.59
MAP1LC3A-203ENST00000397709 DBF4Q9UBU7 674 aaPredicted RBP25■■□□□ 1.59
MAP1LC3A-203ENST00000397709 ZBTB1Q9Y2K1 713 aa25■■□□□ 1.59
MAP1LC3A-203ENST00000397709 STK31Q9BXU1 1019 aa24.99■■□□□ 1.59
MAP1LC3A-203ENST00000397709 DDX21Q9NR30 783 aaKnown RBP eCLIP24.99■■□□□ 1.59
MAP1LC3A-203ENST00000397709 RCAN3Q9UKA8 241 aa24.99■■□□□ 1.59
MAP1LC3A-203ENST00000397709 PROSER3Q2NL68 480 aa24.98■■□□□ 1.59
MAP1LC3A-203ENST00000397709 LRP10Q7Z4F1 713 aa24.98■■□□□ 1.59
MAP1LC3A-203ENST00000397709 MRPL50Q8N5N7 158 aaKnown RBP24.98■■□□□ 1.59
MAP1LC3A-203ENST00000397709 PIP4K2AP48426 406 aaPredicted RBP24.97■■□□□ 1.59
MAP1LC3A-203ENST00000397709 SMC4Q9NTJ3 1288 aa24.97■■□□□ 1.59
MAP1LC3A-203ENST00000397709 ANXA1P04083 346 aa24.96■■□□□ 1.59
MAP1LC3A-203ENST00000397709 BRPF1P55201 1214 aaPredicted RBP24.96■■□□□ 1.59
MAP1LC3A-203ENST00000397709 BCL2L13Q9BXK5 485 aa24.96■■□□□ 1.59
MAP1LC3A-203ENST00000397709 SLC4A2P04920 1241 aa24.95■■□□□ 1.58
MAP1LC3A-203ENST00000397709 CENPBP07199 599 aaPredicted RBP24.95■■□□□ 1.58
MAP1LC3A-203ENST00000397709 CANXP27824 592 aaKnown RBP24.95■■□□□ 1.58
MAP1LC3A-203ENST00000397709 IL6STP40189 918 aaPredicted RBP24.95■■□□□ 1.58
MAP1LC3A-203ENST00000397709 HYPKQ9NX55 129 aa24.95■■□□□ 1.58
MAP1LC3A-203ENST00000397709 UBR3Q6ZT12 1888 aa24.94■■□□□ 1.58
MAP1LC3A-203ENST00000397709 BCAR3O75815 825 aa24.94■■□□□ 1.58
MAP1LC3A-203ENST00000397709 MYL6BP14649 208 aa24.94■■□□□ 1.58
MAP1LC3A-203ENST00000397709 AKT1S1Q96B36 256 aa24.94■■□□□ 1.58
MAP1LC3A-203ENST00000397709 AK7Q96M32 723 aa24.93■■□□□ 1.58
MAP1LC3A-203ENST00000397709 GNPATO15228 680 aa24.92■■□□□ 1.58
MAP1LC3A-203ENST00000397709 RPS6KA4O75676 772 aa24.92■■□□□ 1.58
MAP1LC3A-203ENST00000397709 EIF5P55010 431 aaKnown RBP24.92■■□□□ 1.58
MAP1LC3A-203ENST00000397709 ZNF827Q17R98 1081 aa24.92■■□□□ 1.58
MAP1LC3A-203ENST00000397709 G2E3Q7L622 706 aa24.92■■□□□ 1.58
MAP1LC3A-203ENST00000397709 PHAXQ9H814 394 aaKnown RBP24.91■■□□□ 1.58
MAP1LC3A-203ENST00000397709 TUBGCP6Q96RT7 1819 aa24.91■■□□□ 1.58
MAP1LC3A-203ENST00000397709 ANO8Q9HCE9 1232 aaPredicted RBP24.9■■□□□ 1.58
MAP1LC3A-203ENST00000397709 KIF16BQ96L93 1317 aa24.89■■□□□ 1.58
MAP1LC3A-203ENST00000397709 FLIIQ13045 1269 aa24.89■■□□□ 1.58
MAP1LC3A-203ENST00000397709 AMIGO3Q86WK7 504 aa24.89■■□□□ 1.58
MAP1LC3A-203ENST00000397709 XAGE3Q8WTP9 111 aa24.89■■□□□ 1.58
MAP1LC3A-203ENST00000397709 RTCBQ9Y3I0 505 aaKnown RBP24.89■■□□□ 1.58
MAP1LC3A-203ENST00000397709 COL15A1P39059 1388 aa24.89■■□□□ 1.57
MAP1LC3A-203ENST00000397709 QSER1Q2KHR3 1735 aa24.88■■□□□ 1.57
MAP1LC3A-203ENST00000397709 COPS6Q7L5N1 327 aa24.87■■□□□ 1.57
MAP1LC3A-203ENST00000397709 ZNF330Q9Y3S2 320 aaPredicted RBP24.87■■□□□ 1.57
MAP1LC3A-203ENST00000397709 PTPRCP08575 1304 aa24.86■■□□□ 1.57
MAP1LC3A-203ENST00000397709 C4AP0C0L4 1744 aa24.86■■□□□ 1.57
MAP1LC3A-203ENST00000397709 ADRA2BP18089 450 aa24.86■■□□□ 1.57
MAP1LC3A-203ENST00000397709 SSFA2P28290 1259 aa24.86■■□□□ 1.57
MAP1LC3A-203ENST00000397709 SLC15A2Q16348 729 aa24.86■■□□□ 1.57
MAP1LC3A-203ENST00000397709 TTLL7Q6ZT98 887 aa24.86■■□□□ 1.57
MAP1LC3A-203ENST00000397709 STK32BQ9NY57 414 aa24.86■■□□□ 1.57
MAP1LC3A-203ENST00000397709 NOB1Q9ULX3 412 aaKnown RBP24.86■■□□□ 1.57
MAP1LC3A-203ENST00000397709 A0A087WZG4 1122 aa24.85■■□□□ 1.57
MAP1LC3A-203ENST00000397709 SMIM5Q71RC9 77 aa24.85■■□□□ 1.57
MAP1LC3A-203ENST00000397709 AIMP1Q12904 312 aaKnown RBP24.84■■□□□ 1.57
MAP1LC3A-203ENST00000397709 NPM2Q86SE8 214 aaKnown RBP24.84■■□□□ 1.57
MAP1LC3A-203ENST00000397709 ARHGAP45Q92619 1136 aa24.84■■□□□ 1.57
MAP1LC3A-203ENST00000397709 TFCP2L1Q9NZI6 479 aa24.84■■□□□ 1.57
MAP1LC3A-203ENST00000397709 BCORQ6W2J9 1755 aa24.83■■□□□ 1.57
MAP1LC3A-203ENST00000397709 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP24.83■■□□□ 1.57
MAP1LC3A-203ENST00000397709 FKBP5Q13451 457 aaPredicted RBP24.83■■□□□ 1.57
MAP1LC3A-203ENST00000397709 TRAPPC3LQ5T215 181 aa24.83■■□□□ 1.57
MAP1LC3A-203ENST00000397709 ADCY9O60503 1353 aa24.82■■□□□ 1.56
MAP1LC3A-203ENST00000397709 SCN7AQ01118 1682 aa24.82■■□□□ 1.56
MAP1LC3A-203ENST00000397709 PHF14O94880 888 aa24.82■■□□□ 1.56
MAP1LC3A-203ENST00000397709 KIF6Q6ZMV9 814 aa24.82■■□□□ 1.56
MAP1LC3A-203ENST00000397709 DZIP3Q86Y13 1208 aaKnown RBP24.82■■□□□ 1.56
MAP1LC3A-203ENST00000397709 FRAT1Q92837 279 aaPredicted RBP24.82■■□□□ 1.56
MAP1LC3A-203ENST00000397709 ARHGEF1Q92888 912 aaKnown RBP24.82■■□□□ 1.56
MAP1LC3A-203ENST00000397709 RNF123Q5XPI4 1314 aa24.82■■□□□ 1.56
MAP1LC3A-203ENST00000397709 ARFGEF2Q9Y6D5 1785 aa24.81■■□□□ 1.56
MAP1LC3A-203ENST00000397709 IPO8O15397 1037 aaKnown RBP24.81■■□□□ 1.56
MAP1LC3A-203ENST00000397709 DDX58O95786 925 aaKnown RBP24.81■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms