RNA–Protein interactions for RNA: ENST00000397417.6

IFT140-202, Transcript of intraflagellar transport 140, humanhuman

TSL 5

Gene IFT140, Length 4,023 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140-202ENST00000397417 MINDY4BA8MYZ0 360 aa13.36□□□□□ -0.27
IFT140-202ENST00000397417 IFIT1P09914 478 aaKnown RBP13.36□□□□□ -0.27
IFT140-202ENST00000397417 IFIT5Q13325 482 aaKnown RBP13.36□□□□□ -0.27
IFT140-202ENST00000397417 RABEP1Q15276 862 aa13.36□□□□□ -0.27
IFT140-202ENST00000397417 LRRFIP1Q32MZ4 808 aaKnown RBP13.36□□□□□ -0.27
IFT140-202ENST00000397417 RHPN1Q8TCX5 695 aa13.36□□□□□ -0.27
IFT140-202ENST00000397417 NBPF7P0C2Y1 421 aaPredicted RBP13.36□□□□□ -0.27
IFT140-202ENST00000397417 CYP46A1Q9Y6A2 500 aa13.36□□□□□ -0.27
IFT140-202ENST00000397417 ERICH2A1L162 156 aa13.35□□□□□ -0.27
IFT140-202ENST00000397417 BECN2A8MW95 431 aa13.35□□□□□ -0.27
IFT140-202ENST00000397417 TRIM29Q14134 588 aa13.35□□□□□ -0.27
IFT140-202ENST00000397417 BLOC1S2Q6QNY1 142 aa13.35□□□□□ -0.27
IFT140-202ENST00000397417 FAM89AQ96GI7 184 aa13.35□□□□□ -0.27
IFT140-202ENST00000397417 HYPKQ9NX55 129 aa13.35□□□□□ -0.27
IFT140-202ENST00000397417 NPC1L1Q9UHC9 1359 aa13.35□□□□□ -0.27
IFT140-202ENST00000397417 HTATSF1O43719 755 aaKnown RBP13.35□□□□□ -0.27
IFT140-202ENST00000397417 IL17REQ8NFR9 667 aa13.35□□□□□ -0.27
IFT140-202ENST00000397417 ZBTB40Q9NUA8 1239 aa13.35□□□□□ -0.27
IFT140-202ENST00000397417 KIF3AQ9Y496 699 aa13.35□□□□□ -0.27
IFT140-202ENST00000397417 ZCCHC11Q5TAX3 1644 aaKnown RBP13.35□□□□□ -0.27
IFT140-202ENST00000397417 MYO5CQ9NQX4 1742 aa13.35□□□□□ -0.27
IFT140-202ENST00000397417 CPA1P15085 419 aa13.35□□□□□ -0.27
IFT140-202ENST00000397417 AKAP4Q5JQC9 854 aa13.35□□□□□ -0.27
IFT140-202ENST00000397417 NUCB2P80303 420 aa13.34□□□□□ -0.27
IFT140-202ENST00000397417 ZNF496Q96IT1 587 aaPredicted RBP13.34□□□□□ -0.27
IFT140-202ENST00000397417 SLAIN2Q9P270 581 aa13.34□□□□□ -0.27
IFT140-202ENST00000397417 ATP6V1AP38606 617 aa13.34□□□□□ -0.27
IFT140-202ENST00000397417 RBM5P52756 815 aaKnown RBP eCLIP13.34□□□□□ -0.27
IFT140-202ENST00000397417 IKQ13123 557 aaPredicted RBP13.34□□□□□ -0.27
IFT140-202ENST00000397417 CCDC144CPQ8IYA2 1237 aa13.34□□□□□ -0.27
IFT140-202ENST00000397417 TRIM34Q9BYJ4 488 aa13.34□□□□□ -0.27
IFT140-202ENST00000397417 CCT2P78371 535 aaKnown RBP13.34□□□□□ -0.27
IFT140-202ENST00000397417 DDB1Q16531 1140 aa13.34□□□□□ -0.27
IFT140-202ENST00000397417 GLRX3O76003 335 aaKnown RBP13.33□□□□□ -0.28
IFT140-202ENST00000397417 SSFA2P28290 1259 aa13.33□□□□□ -0.28
IFT140-202ENST00000397417 KIAA2012Q0VF49 1180 aa13.33□□□□□ -0.28
IFT140-202ENST00000397417 PNMA6EA0A0J9YXQ4 647 aa13.33□□□□□ -0.28
IFT140-202ENST00000397417 ZPR1O75312 459 aa13.33□□□□□ -0.28
IFT140-202ENST00000397417 TDO2P48775 406 aa13.33□□□□□ -0.28
IFT140-202ENST00000397417 RNMTO43148 476 aaKnown RBP13.33□□□□□ -0.28
IFT140-202ENST00000397417 ATP6V1DQ9Y5K8 247 aa13.33□□□□□ -0.28
IFT140-202ENST00000397417 USP16Q9Y5T5 823 aa13.33□□□□□ -0.28
IFT140-202ENST00000397417 IQGAP3Q86VI3 1631 aa13.32□□□□□ -0.28
IFT140-202ENST00000397417 IL2RBP14784 551 aa13.32□□□□□ -0.28
IFT140-202ENST00000397417 TIMM10P62072 90 aa13.32□□□□□ -0.28
IFT140-202ENST00000397417 LARP1BQ659C4 914 aaKnown RBP13.32□□□□□ -0.28
IFT140-202ENST00000397417 CEP85Q6P2H3 762 aa13.32□□□□□ -0.28
IFT140-202ENST00000397417 CHST3Q7LGC8 479 aa13.32□□□□□ -0.28
IFT140-202ENST00000397417 ZNF594Q96JF6 807 aaPredicted RBP13.32□□□□□ -0.28
IFT140-202ENST00000397417 UNC13BO14795 1591 aa13.32□□□□□ -0.28
IFT140-202ENST00000397417 PTPRCP08575 1304 aa13.32□□□□□ -0.28
IFT140-202ENST00000397417 GRM8O00222 908 aa13.32□□□□□ -0.28
IFT140-202ENST00000397417 RAB11FIP3O75154 756 aa13.32□□□□□ -0.28
IFT140-202ENST00000397417 TRMT2AQ8IZ69 625 aaKnown RBP13.32□□□□□ -0.28
IFT140-202ENST00000397417 SIRT1Q96EB6 747 aa13.32□□□□□ -0.28
IFT140-202ENST00000397417 PDRG1Q9NUG6 133 aa13.32□□□□□ -0.28
IFT140-202ENST00000397417 ZBTB7BO15156 539 aaPredicted RBP13.32□□□□□ -0.28
IFT140-202ENST00000397417 PDE1AP54750 535 aa13.32□□□□□ -0.28
IFT140-202ENST00000397417 ERVK-7P63135 1459 aa13.32□□□□□ -0.28
IFT140-202ENST00000397417 IGHMBP2P38935 993 aaKnown RBP13.31□□□□□ -0.28
IFT140-202ENST00000397417 NECAB1Q8N987 351 aa13.31□□□□□ -0.28
IFT140-202ENST00000397417 SDF4Q9BRK5 362 aa13.31□□□□□ -0.28
IFT140-202ENST00000397417 ANKIB1Q9P2G1 1089 aa13.31□□□□□ -0.28
IFT140-202ENST00000397417 NUCB1Q02818 461 aa13.31□□□□□ -0.28
IFT140-202ENST00000397417 FAM98CQ17RN3 349 aaKnown RBP13.31□□□□□ -0.28
IFT140-202ENST00000397417 ANKRD44Q8N8A2 993 aa13.31□□□□□ -0.28
IFT140-202ENST00000397417 USP19O94966 1318 aa13.31□□□□□ -0.28
IFT140-202ENST00000397417 PRIM1P49642 420 aaKnown RBP13.31□□□□□ -0.28
IFT140-202ENST00000397417 ECHDC1Q9NTX5 307 aa13.31□□□□□ -0.28
IFT140-202ENST00000397417 CWC25Q9NXE8 425 aaPredicted RBP13.31□□□□□ -0.28
IFT140-202ENST00000397417 IL16Q14005 1332 aa13.31□□□□□ -0.28
IFT140-202ENST00000397417 PSMA5P28066 241 aa13.3□□□□□ -0.28
IFT140-202ENST00000397417 ZNF790Q6PG37 636 aa13.3□□□□□ -0.28
IFT140-202ENST00000397417 PIK3R4Q99570 1358 aa13.3□□□□□ -0.28
IFT140-202ENST00000397417 E9PCH4 1651 aa13.3□□□□□ -0.28
IFT140-202ENST00000397417 AMOTL1Q8IY63 956 aa13.3□□□□□ -0.28
IFT140-202ENST00000397417 EDC3Q96F86 508 aaKnown RBP13.3□□□□□ -0.28
IFT140-202ENST00000397417 GOLGA6L6A8MZA4 724 aa13.3□□□□□ -0.28
IFT140-202ENST00000397417 GOLGA6L19H0YKK7 550 aa13.3□□□□□ -0.28
IFT140-202ENST00000397417 KSR2Q6VAB6 950 aa13.3□□□□□ -0.28
IFT140-202ENST00000397417 ZSCAN29Q8IWY8 852 aaPredicted RBP13.3□□□□□ -0.28
IFT140-202ENST00000397417 UBE2Q2Q8WVN8 375 aa13.3□□□□□ -0.28
IFT140-202ENST00000397417 ZFYVE16Q7Z3T8 1539 aa13.3□□□□□ -0.28
IFT140-202ENST00000397417 HCLS1P14317 486 aaPredicted RBP13.29□□□□□ -0.28
IFT140-202ENST00000397417 TTC22Q5TAA0 569 aa13.29□□□□□ -0.28
IFT140-202ENST00000397417 AIDAQ96BJ3 306 aa13.29□□□□□ -0.28
IFT140-202ENST00000397417 TFIP11Q9UBB9 837 aaKnown RBP13.29□□□□□ -0.28
IFT140-202ENST00000397417 LMTK3Q96Q04 1460 aa13.29□□□□□ -0.28
IFT140-202ENST00000397417 CHL1O00533 1208 aa13.29□□□□□ -0.28
IFT140-202ENST00000397417 ZNF592Q92610 1267 aa13.29□□□□□ -0.28
IFT140-202ENST00000397417 ZNF335Q9H4Z2 1342 aaPredicted RBP13.29□□□□□ -0.28
IFT140-202ENST00000397417 NRDCO43847 1150 aa13.29□□□□□ -0.28
IFT140-202ENST00000397417 DNAJC10Q8IXB1 793 aa13.29□□□□□ -0.28
IFT140-202ENST00000397417 BICC1Q9H694 974 aaKnown RBP13.29□□□□□ -0.28
IFT140-202ENST00000397417 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.29□□□□□ -0.28
IFT140-202ENST00000397417 MAP3K5Q99683 1374 aa13.29□□□□□ -0.28
IFT140-202ENST00000397417 PLXNC1O60486 1568 aa13.29□□□□□ -0.28
IFT140-202ENST00000397417 PLEKHG3A1L390 1219 aa13.29□□□□□ -0.28
IFT140-202ENST00000397417 MCM4P33991 863 aa13.29□□□□□ -0.28
IFT140-202ENST00000397417 PROSER3Q2NL68 480 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms