RNA–Protein interactions for RNA: ENST00000397406.5

TSPAN4-205, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,426 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-205ENST00000397406 EIF4A1P60842 406 aaKnown RBP21.83■■□□□ 1.09
TSPAN4-205ENST00000397406 ARXQ96QS3 562 aa21.83■■□□□ 1.09
TSPAN4-205ENST00000397406 COL24A1Q17RW2 1714 aa21.83■■□□□ 1.09
TSPAN4-205ENST00000397406 SLC16A10Q8TF71 515 aa21.82■■□□□ 1.08
TSPAN4-205ENST00000397406 ATG3Q9NT62 314 aa21.82■■□□□ 1.08
TSPAN4-205ENST00000397406 C5P01031 1676 aa21.81■■□□□ 1.08
TSPAN4-205ENST00000397406 ELL2O00472 640 aaPredicted RBP21.81■■□□□ 1.08
TSPAN4-205ENST00000397406 ITPK1Q13572 414 aa21.81■■□□□ 1.08
TSPAN4-205ENST00000397406 ZNF790Q6PG37 636 aa21.81■■□□□ 1.08
TSPAN4-205ENST00000397406 ZNF428Q96B54 188 aa21.81■■□□□ 1.08
TSPAN4-205ENST00000397406 SLC4A9Q96Q91 983 aa21.81■■□□□ 1.08
TSPAN4-205ENST00000397406 HEG1Q9ULI3 1381 aa21.81■■□□□ 1.08
TSPAN4-205ENST00000397406 SLC39A6Q13433 755 aa21.8■■□□□ 1.08
TSPAN4-205ENST00000397406 LINC00116Q8NCU8 138 aa21.8■■□□□ 1.08
TSPAN4-205ENST00000397406 SMARCC1Q92922 1105 aaPredicted RBP21.8■■□□□ 1.08
TSPAN4-205ENST00000397406 TMOD3Q9NYL9 352 aa21.8■■□□□ 1.08
TSPAN4-205ENST00000397406 LOC102724428A0A0B4J2F2 783 aa21.8■■□□□ 1.08
TSPAN4-205ENST00000397406 BCAR3O75815 825 aa21.8■■□□□ 1.08
TSPAN4-205ENST00000397406 SIK1P57059 783 aa21.8■■□□□ 1.08
TSPAN4-205ENST00000397406 CACNA1FO60840 1977 aa21.79■■□□□ 1.08
TSPAN4-205ENST00000397406 SOS1Q07889 1333 aaPredicted RBP21.79■■□□□ 1.08
TSPAN4-205ENST00000397406 KCPQ6ZWJ8 1503 aa21.79■■□□□ 1.08
TSPAN4-205ENST00000397406 TAF1LQ8IZX4 1826 aa21.79■■□□□ 1.08
TSPAN4-205ENST00000397406 RRP1P56182 461 aaKnown RBP21.78■■□□□ 1.08
TSPAN4-205ENST00000397406 ALDH1L2Q3SY69 923 aa21.78■■□□□ 1.08
TSPAN4-205ENST00000397406 SSH1Q8WYL5 1049 aa21.78■■□□□ 1.08
TSPAN4-205ENST00000397406 UTRNP46939 3433 aa21.78■■□□□ 1.08
TSPAN4-205ENST00000397406 LAMB4A4D0S4 1761 aa21.77■■□□□ 1.08
TSPAN4-205ENST00000397406 C4BP0C0L5 1744 aa21.77■■□□□ 1.08
TSPAN4-205ENST00000397406 HOXB7P09629 217 aa21.76■■□□□ 1.07
TSPAN4-205ENST00000397406 MSL1Q68DK7 614 aa21.76■■□□□ 1.07
TSPAN4-205ENST00000397406 TTC5Q8N0Z6 440 aa21.75■■□□□ 1.07
TSPAN4-205ENST00000397406 BCL2L13Q9BXK5 485 aa21.75■■□□□ 1.07
TSPAN4-205ENST00000397406 GIGYF1O75420 1035 aaPredicted RBP21.74■■□□□ 1.07
TSPAN4-205ENST00000397406 ZNF496Q96IT1 587 aaPredicted RBP21.74■■□□□ 1.07
TSPAN4-205ENST00000397406 SMC4Q9NTJ3 1288 aa21.74■■□□□ 1.07
TSPAN4-205ENST00000397406 BRPF1P55201 1214 aaPredicted RBP21.73■■□□□ 1.07
TSPAN4-205ENST00000397406 MSH5O43196 834 aa21.72■■□□□ 1.07
TSPAN4-205ENST00000397406 NLGN2Q8NFZ4 835 aa21.72■■□□□ 1.07
TSPAN4-205ENST00000397406 FMNL2Q96PY5 1086 aa21.72■■□□□ 1.07
TSPAN4-205ENST00000397406 PLIN1O60240 522 aa21.72■■□□□ 1.07
TSPAN4-205ENST00000397406 ATP6V1AP38606 617 aa21.72■■□□□ 1.07
TSPAN4-205ENST00000397406 MRPL50Q8N5N7 158 aaKnown RBP21.72■■□□□ 1.07
TSPAN4-205ENST00000397406 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.71■■□□□ 1.07
TSPAN4-205ENST00000397406 TCERG1O14776 1098 aaKnown RBP21.71■■□□□ 1.07
TSPAN4-205ENST00000397406 AK7Q96M32 723 aa21.71■■□□□ 1.07
TSPAN4-205ENST00000397406 UBR3Q6ZT12 1888 aa21.7■■□□□ 1.06
TSPAN4-205ENST00000397406 PRAMEF22A3QJZ6 481 aa21.7■■□□□ 1.06
TSPAN4-205ENST00000397406 PHF14O94880 888 aa21.7■■□□□ 1.06
TSPAN4-205ENST00000397406 POLD1P28340 1107 aa21.7■■□□□ 1.06
TSPAN4-205ENST00000397406 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.7■■□□□ 1.06
TSPAN4-205ENST00000397406 CICQ96RK0 1608 aaPredicted RBP21.69■■□□□ 1.06
TSPAN4-205ENST00000397406 HDGFL1Q5TGJ6 251 aa21.69■■□□□ 1.06
TSPAN4-205ENST00000397406 CCDC30Q5VVM6 783 aa21.69■■□□□ 1.06
TSPAN4-205ENST00000397406 TJP1Q07157 1748 aa21.68■■□□□ 1.06
TSPAN4-205ENST00000397406 SNRPA1P09661 255 aaKnown RBP21.68■■□□□ 1.06
TSPAN4-205ENST00000397406 YY1P25490 414 aa21.68■■□□□ 1.06
TSPAN4-205ENST00000397406 KIF16BQ96L93 1317 aa21.68■■□□□ 1.06
TSPAN4-205ENST00000397406 ZNF831Q5JPB2 1677 aa21.67■■□□□ 1.06
TSPAN4-205ENST00000397406 FLAD1Q8NFF5 587 aa21.67■■□□□ 1.06
TSPAN4-205ENST00000397406 GNPATO15228 680 aa21.66■■□□□ 1.06
TSPAN4-205ENST00000397406 PTCD1O75127 700 aaKnown RBP21.66■■□□□ 1.06
TSPAN4-205ENST00000397406 NEFLP07196 543 aa21.66■■□□□ 1.06
TSPAN4-205ENST00000397406 EIF2S2P20042 333 aaKnown RBP21.66■■□□□ 1.06
TSPAN4-205ENST00000397406 SSFA2P28290 1259 aa21.66■■□□□ 1.06
TSPAN4-205ENST00000397406 IRX6P78412 446 aaPredicted RBP21.66■■□□□ 1.06
TSPAN4-205ENST00000397406 KLHL34Q8N239 644 aa21.66■■□□□ 1.06
TSPAN4-205ENST00000397406 NECTIN2Q92692 538 aa21.66■■□□□ 1.06
TSPAN4-205ENST00000397406 FRAT1Q92837 279 aaPredicted RBP21.66■■□□□ 1.06
TSPAN4-205ENST00000397406 RBM42Q9BTD8 480 aaKnown RBP21.66■■□□□ 1.06
TSPAN4-205ENST00000397406 CHMP4AQ9BY43 222 aa21.66■■□□□ 1.06
TSPAN4-205ENST00000397406 NOB1Q9ULX3 412 aaKnown RBP21.65■■□□□ 1.06
TSPAN4-205ENST00000397406 GOLGB1Q14789 3259 aaKnown RBP21.65■■□□□ 1.06
TSPAN4-205ENST00000397406 VSIG10Q8N0Z9 540 aa21.64■■□□□ 1.06
TSPAN4-205ENST00000397406 STK31Q9BXU1 1019 aa21.64■■□□□ 1.06
TSPAN4-205ENST00000397406 SLC4A2P04920 1241 aa21.63■■□□□ 1.05
TSPAN4-205ENST00000397406 CANXP27824 592 aaKnown RBP21.63■■□□□ 1.05
TSPAN4-205ENST00000397406 C20orf194Q5TEA3 1177 aa21.63■■□□□ 1.05
TSPAN4-205ENST00000397406 ZKSCAN2Q63HK3 967 aa21.63■■□□□ 1.05
TSPAN4-205ENST00000397406 GTF3C3Q9Y5Q9 886 aa21.63■■□□□ 1.05
TSPAN4-205ENST00000397406 USP16Q9Y5T5 823 aa21.63■■□□□ 1.05
TSPAN4-205ENST00000397406 FKBP8Q14318 412 aa21.63■■□□□ 1.05
TSPAN4-205ENST00000397406 ARHGAP45Q92619 1136 aa21.63■■□□□ 1.05
TSPAN4-205ENST00000397406 CHPF2Q9P2E5 772 aa21.63■■□□□ 1.05
TSPAN4-205ENST00000397406 TNNQ9UQP3 1299 aa21.63■■□□□ 1.05
TSPAN4-205ENST00000397406 PDE3AQ14432 1141 aa21.62■■□□□ 1.05
TSPAN4-205ENST00000397406 ATF7IPQ6VMQ6 1270 aa21.62■■□□□ 1.05
TSPAN4-205ENST00000397406 COL5A3P25940 1745 aaPredicted RBP21.61■■□□□ 1.05
TSPAN4-205ENST00000397406 IPO8O15397 1037 aaKnown RBP21.61■■□□□ 1.05
TSPAN4-205ENST00000397406 TRIM27P14373 513 aa21.61■■□□□ 1.05
TSPAN4-205ENST00000397406 HMGB2P26583 209 aaKnown RBP21.61■■□□□ 1.05
TSPAN4-205ENST00000397406 RC3H1Q5TC82 1133 aaKnown RBP21.61■■□□□ 1.05
TSPAN4-205ENST00000397406 G2E3Q7L622 706 aa21.61■■□□□ 1.05
TSPAN4-205ENST00000397406 DBF4Q9UBU7 674 aaPredicted RBP21.61■■□□□ 1.05
TSPAN4-205ENST00000397406 CNTNAP4Q9C0A0 1308 aa21.6■■□□□ 1.05
TSPAN4-205ENST00000397406 DCAF8L1A6NGE4 600 aa21.6■■□□□ 1.05
TSPAN4-205ENST00000397406 YBX3P16989 372 aaKnown RBP eCLIP21.6■■□□□ 1.05
TSPAN4-205ENST00000397406 N4BP2Q86UW6 1770 aaPredicted RBP21.59■■□□□ 1.05
TSPAN4-205ENST00000397406 PDIA6Q15084 440 aa21.59■■□□□ 1.05
TSPAN4-205ENST00000397406 ARHGEF1Q92888 912 aaKnown RBP21.59■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms