RNA–Protein interactions for RNA: ENST00000397204.8

CAPN3-208, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,237 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-208ENST00000397204 IER5LQ5T953 404 aa12.05□□□□□ -0.48
CAPN3-208ENST00000397204 TGFB2P61812 414 aa12.04□□□□□ -0.48
CAPN3-208ENST00000397204 PLEKHO1Q53GL0 409 aaPredicted RBP12.04□□□□□ -0.48
CAPN3-208ENST00000397204 DCAF5Q96JK2 942 aa12.04□□□□□ -0.48
CAPN3-208ENST00000397204 COLQQ9Y215 455 aaPredicted RBP12.04□□□□□ -0.48
CAPN3-208ENST00000397204 RTCBQ9Y3I0 505 aaKnown RBP12.04□□□□□ -0.48
CAPN3-208ENST00000397204 C5P01031 1676 aa12.03□□□□□ -0.48
CAPN3-208ENST00000397204 SEC24BO95487 1268 aa12.03□□□□□ -0.48
CAPN3-208ENST00000397204 MMP10P09238 476 aa12.03□□□□□ -0.48
CAPN3-208ENST00000397204 TNNT2P45379 298 aaPredicted RBP12.03□□□□□ -0.48
CAPN3-208ENST00000397204 GOLGA2Q08379 1002 aa12.03□□□□□ -0.48
CAPN3-208ENST00000397204 AMOTQ4VCS5 1084 aa12.03□□□□□ -0.48
CAPN3-208ENST00000397204 C4BP0C0L5 1744 aa12.03□□□□□ -0.48
CAPN3-208ENST00000397204 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.02□□□□□ -0.49
CAPN3-208ENST00000397204 RPS6KA4O75676 772 aa12.02□□□□□ -0.49
CAPN3-208ENST00000397204 HSPA6P17066 643 aa12.02□□□□□ -0.49
CAPN3-208ENST00000397204 CABP4P57796 275 aa12.02□□□□□ -0.49
CAPN3-208ENST00000397204 ZNF526Q8TF50 670 aaPredicted RBP12.02□□□□□ -0.49
CAPN3-208ENST00000397204 ARHGEF1Q92888 912 aaKnown RBP12.02□□□□□ -0.49
CAPN3-208ENST00000397204 ZFP91Q96JP5 570 aaPredicted RBP12.02□□□□□ -0.49
CAPN3-208ENST00000397204 SLC4A9Q96Q91 983 aa12.02□□□□□ -0.49
CAPN3-208ENST00000397204 POLR3GLQ9BT43 218 aa12.02□□□□□ -0.49
CAPN3-208ENST00000397204 CLSPNQ9HAW4 1339 aa12.02□□□□□ -0.49
CAPN3-208ENST00000397204 ADCY9O60503 1353 aa12.02□□□□□ -0.49
CAPN3-208ENST00000397204 IFFO2Q5TF58 517 aa12.01□□□□□ -0.49
CAPN3-208ENST00000397204 WWC3Q9ULE0 1092 aa12.01□□□□□ -0.49
CAPN3-208ENST00000397204 TAF1LQ8IZX4 1826 aa12.01□□□□□ -0.49
CAPN3-208ENST00000397204 RFC4P35249 363 aa12□□□□□ -0.49
CAPN3-208ENST00000397204 MTHFSP49914 203 aa12□□□□□ -0.49
CAPN3-208ENST00000397204 MKRN3Q13064 507 aaKnown RBP12□□□□□ -0.49
CAPN3-208ENST00000397204 PANK3Q9H999 370 aa12□□□□□ -0.49
CAPN3-208ENST00000397204 CCDC87Q9NVE4 849 aa12□□□□□ -0.49
CAPN3-208ENST00000397204 PKD1L3Q7Z443 1732 aa12□□□□□ -0.49
CAPN3-208ENST00000397204 ITGB4P16144 1822 aa12□□□□□ -0.49
CAPN3-208ENST00000397204 KIF20BQ96Q89 1820 aa12□□□□□ -0.49
CAPN3-208ENST00000397204 A0A0G2JLW4 131 aa11.99□□□□□ -0.49
CAPN3-208ENST00000397204 GYS1P13807 737 aa11.99□□□□□ -0.49
CAPN3-208ENST00000397204 EIF4G2P78344 907 aaKnown RBP eCLIP11.99□□□□□ -0.49
CAPN3-208ENST00000397204 ZNF530Q6P9A1 599 aaPredicted RBP11.99□□□□□ -0.49
CAPN3-208ENST00000397204 PARP3Q9Y6F1 533 aa11.99□□□□□ -0.49
CAPN3-208ENST00000397204 CNTNAP4Q9C0A0 1308 aa11.99□□□□□ -0.49
CAPN3-208ENST00000397204 UBR3Q6ZT12 1888 aa11.98□□□□□ -0.49
CAPN3-208ENST00000397204 MAP2P11137 1827 aaKnown RBP11.98□□□□□ -0.49
CAPN3-208ENST00000397204 TOGARAM1Q9Y4F4 1720 aa11.98□□□□□ -0.49
CAPN3-208ENST00000397204 KIF3CO14782 793 aa11.98□□□□□ -0.49
CAPN3-208ENST00000397204 IRX5P78411 483 aaPredicted RBP11.98□□□□□ -0.49
CAPN3-208ENST00000397204 NFATC2IPQ8NCF5 419 aa11.98□□□□□ -0.49
CAPN3-208ENST00000397204 BCS1LQ9Y276 419 aa11.98□□□□□ -0.49
CAPN3-208ENST00000397204 KDRP35968 1356 aa11.97□□□□□ -0.49
CAPN3-208ENST00000397204 PTCD1O75127 700 aaKnown RBP11.97□□□□□ -0.49
CAPN3-208ENST00000397204 PLCG2P16885 1265 aa11.97□□□□□ -0.49
CAPN3-208ENST00000397204 C1orf141Q5JVX7 400 aa11.97□□□□□ -0.49
CAPN3-208ENST00000397204 ARHGAP27Q6ZUM4 889 aa11.97□□□□□ -0.49
CAPN3-208ENST00000397204 MORC1Q86VD1 984 aa11.97□□□□□ -0.49
CAPN3-208ENST00000397204 TOMM70O94826 608 aa11.96□□□□□ -0.49
CAPN3-208ENST00000397204 FCHSD2O94868 740 aa11.96□□□□□ -0.49
CAPN3-208ENST00000397204 HSPA5P11021 654 aaKnown RBP11.96□□□□□ -0.49
CAPN3-208ENST00000397204 DPEP1P16444 411 aa11.96□□□□□ -0.49
CAPN3-208ENST00000397204 TAOK2Q9UL54 1235 aa11.96□□□□□ -0.49
CAPN3-208ENST00000397204 POTEJP0CG39 1038 aa11.95□□□□□ -0.5
CAPN3-208ENST00000397204 KCNA3P22001 575 aa11.95□□□□□ -0.5
CAPN3-208ENST00000397204 CRKLP46109 303 aaKnown RBP11.95□□□□□ -0.5
CAPN3-208ENST00000397204 PCGF6Q9BYE7 350 aa11.95□□□□□ -0.5
CAPN3-208ENST00000397204 PIM2Q9P1W9 311 aa11.95□□□□□ -0.5
CAPN3-208ENST00000397204 PXDNLA1KZ92 1463 aa11.95□□□□□ -0.5
CAPN3-208ENST00000397204 ANKRD26Q9UPS8 1709 aa11.94□□□□□ -0.5
CAPN3-208ENST00000397204 APLP1P51693 650 aa11.94□□□□□ -0.5
CAPN3-208ENST00000397204 SULT6B1Q6IMI4 303 aa11.94□□□□□ -0.5
CAPN3-208ENST00000397204 AEBP1Q8IUX7 1158 aa11.94□□□□□ -0.5
CAPN3-208ENST00000397204 KNSTRNQ9Y448 316 aa11.94□□□□□ -0.5
CAPN3-208ENST00000397204 IL13P35225 146 aa11.93□□□□□ -0.5
CAPN3-208ENST00000397204 DALRD3Q5D0E6 543 aaKnown RBP11.93□□□□□ -0.5
CAPN3-208ENST00000397204 OCEL1Q9H607 264 aa11.93□□□□□ -0.5
CAPN3-208ENST00000397204 KDM6AO15550 1401 aaPredicted RBP11.93□□□□□ -0.5
CAPN3-208ENST00000397204 C10orf71Q711Q0 1435 aa11.93□□□□□ -0.5
CAPN3-208ENST00000397204 STK25O00506 426 aa11.92□□□□□ -0.5
CAPN3-208ENST00000397204 TM4SF1P30408 202 aa11.92□□□□□ -0.5
CAPN3-208ENST00000397204 AKAP4Q5JQC9 854 aa11.92□□□□□ -0.5
CAPN3-208ENST00000397204 INTS5Q6P9B9 1019 aaKnown RBP11.92□□□□□ -0.5
CAPN3-208ENST00000397204 EFCAB3Q8N7B9 438 aa11.92□□□□□ -0.5
CAPN3-208ENST00000397204 USP42Q9H9J4 1324 aaKnown RBP11.91□□□□□ -0.5
CAPN3-208ENST00000397204 ZPR1O75312 459 aa11.91□□□□□ -0.5
CAPN3-208ENST00000397204 C9orf131Q5VYM1 1079 aa11.91□□□□□ -0.5
CAPN3-208ENST00000397204 DNAJC5GQ8N7S2 189 aa11.91□□□□□ -0.5
CAPN3-208ENST00000397204 SLC52A2Q9HAB3 445 aa11.91□□□□□ -0.5
CAPN3-208ENST00000397204 SRP68Q9UHB9 627 aaKnown RBP11.91□□□□□ -0.5
CAPN3-208ENST00000397204 STK24Q9Y6E0 443 aa11.91□□□□□ -0.5
CAPN3-208ENST00000397204 ZNF831Q5JPB2 1677 aa11.91□□□□□ -0.5
CAPN3-208ENST00000397204 DDR1Q08345 913 aa11.9□□□□□ -0.5
CAPN3-208ENST00000397204 RBM46Q8TBY0 533 aaKnown RBP11.9□□□□□ -0.5
CAPN3-208ENST00000397204 NMRK2Q9NPI5 230 aa11.9□□□□□ -0.5
CAPN3-208ENST00000397204 CICQ96RK0 1608 aaPredicted RBP11.89□□□□□ -0.51
CAPN3-208ENST00000397204 POLRMTO00411 1230 aaKnown RBP11.89□□□□□ -0.51
CAPN3-208ENST00000397204 PDCD7Q8N8D1 485 aaKnown RBP11.89□□□□□ -0.51
CAPN3-208ENST00000397204 OTUD5Q96G74 571 aa11.89□□□□□ -0.51
CAPN3-208ENST00000397204 LGR6Q9HBX8 967 aa11.89□□□□□ -0.51
CAPN3-208ENST00000397204 KDM2BQ8NHM5 1336 aa11.88□□□□□ -0.51
CAPN3-208ENST00000397204 RNMTO43148 476 aaKnown RBP11.88□□□□□ -0.51
CAPN3-208ENST00000397204 CYP19A1P11511 503 aaPredicted RBP11.88□□□□□ -0.51
CAPN3-208ENST00000397204 FSTL1Q12841 308 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms