RNA–Protein interactions for RNA: ENST00000396410.8

PDXDC1-202, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDXDC1, Length 4,521 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-202ENST00000396410 NBPF7P0C2Y1 421 aaPredicted RBP14.05□□□□□ -0.16
PDXDC1-202ENST00000396410 ESYT1Q9BSJ8 1104 aa14.05□□□□□ -0.16
PDXDC1-202ENST00000396410 CWC22Q9HCG8 908 aaKnown RBP14.05□□□□□ -0.16
PDXDC1-202ENST00000396410 RAB3GAP1Q15042 981 aa14.05□□□□□ -0.16
PDXDC1-202ENST00000396410 PIK3C2AO00443 1686 aa14.05□□□□□ -0.16
PDXDC1-202ENST00000396410 ERC1Q8IUD2 1116 aa14.04□□□□□ -0.16
PDXDC1-202ENST00000396410 RUFY2Q8WXA3 655 aa14.04□□□□□ -0.16
PDXDC1-202ENST00000396410 MCM2P49736 904 aa14.04□□□□□ -0.16
PDXDC1-202ENST00000396410 SLC39A6Q13433 755 aa14.04□□□□□ -0.16
PDXDC1-202ENST00000396410 KIF2CQ99661 725 aa14.04□□□□□ -0.16
PDXDC1-202ENST00000396410 CHRNA2Q15822 529 aa14.03□□□□□ -0.16
PDXDC1-202ENST00000396410 KSR2Q6VAB6 950 aa14.03□□□□□ -0.16
PDXDC1-202ENST00000396410 CABLES1Q8TDN4 633 aa14.03□□□□□ -0.16
PDXDC1-202ENST00000396410 OSBPL3Q9H4L5 887 aa14.03□□□□□ -0.16
PDXDC1-202ENST00000396410 IBTKQ9P2D0 1353 aaPredicted RBP14.03□□□□□ -0.16
PDXDC1-202ENST00000396410 CHMP3Q9Y3E7 222 aa14.03□□□□□ -0.16
PDXDC1-202ENST00000396410 DDX17Q92841 729 aaKnown RBP14.03□□□□□ -0.16
PDXDC1-202ENST00000396410 NALCNQ8IZF0 1738 aa14.03□□□□□ -0.16
PDXDC1-202ENST00000396410 TPRNQ4KMQ1 711 aa14.03□□□□□ -0.16
PDXDC1-202ENST00000396410 FMN2Q9NZ56 1722 aa14.02□□□□□ -0.16
PDXDC1-202ENST00000396410 CHMLP26374 656 aa14.02□□□□□ -0.16
PDXDC1-202ENST00000396410 CWF19L2Q2TBE0 894 aaKnown RBP14.02□□□□□ -0.16
PDXDC1-202ENST00000396410 CWC27Q6UX04 472 aaKnown RBP14.02□□□□□ -0.16
PDXDC1-202ENST00000396410 SSH3Q8TE77 659 aa14.02□□□□□ -0.16
PDXDC1-202ENST00000396410 SIL1Q9H173 461 aa14.02□□□□□ -0.16
PDXDC1-202ENST00000396410 MRE11P49959 708 aa14.02□□□□□ -0.17
PDXDC1-202ENST00000396410 CABP4P57796 275 aa14.02□□□□□ -0.17
PDXDC1-202ENST00000396410 BEND3Q5T5X7 828 aa14.02□□□□□ -0.17
PDXDC1-202ENST00000396410 AACSQ86V21 672 aa14.02□□□□□ -0.17
PDXDC1-202ENST00000396410 ALDH1L1O75891 902 aa14.01□□□□□ -0.17
PDXDC1-202ENST00000396410 IFNL2Q8IZJ0 200 aa14.01□□□□□ -0.17
PDXDC1-202ENST00000396410 GIGYF1O75420 1035 aaPredicted RBP14.01□□□□□ -0.17
PDXDC1-202ENST00000396410 UPF3BQ9BZI7 483 aaKnown RBP14.01□□□□□ -0.17
PDXDC1-202ENST00000396410 ZNF330Q9Y3S2 320 aaPredicted RBP14.01□□□□□ -0.17
PDXDC1-202ENST00000396410 XRN1Q8IZH2 1706 aaKnown RBP14.01□□□□□ -0.17
PDXDC1-202ENST00000396410 GLRX3O76003 335 aaKnown RBP14.01□□□□□ -0.17
PDXDC1-202ENST00000396410 LARP1Q6PKG0 1096 aaKnown RBP14□□□□□ -0.17
PDXDC1-202ENST00000396410 CADPS2Q86UW7 1296 aa14□□□□□ -0.17
PDXDC1-202ENST00000396410 NFATC2IPQ8NCF5 419 aa14□□□□□ -0.17
PDXDC1-202ENST00000396410 AXIN2Q9Y2T1 843 aa14□□□□□ -0.17
PDXDC1-202ENST00000396410 FOXD4L6Q3SYB3 417 aaPredicted RBP14□□□□□ -0.17
PDXDC1-202ENST00000396410 FOXD4L3Q6VB84 417 aaPredicted RBP14□□□□□ -0.17
PDXDC1-202ENST00000396410 NPHP3Q7Z494 1330 aa13.99□□□□□ -0.17
PDXDC1-202ENST00000396410 MYD88Q99836 296 aa13.99□□□□□ -0.17
PDXDC1-202ENST00000396410 BAG4O95429 457 aaKnown RBP13.99□□□□□ -0.17
PDXDC1-202ENST00000396410 RGPD1P0DJD0 1748 aa13.99□□□□□ -0.17
PDXDC1-202ENST00000396410 TOM1L2Q6ZVM7 507 aa13.99□□□□□ -0.17
PDXDC1-202ENST00000396410 PA2G4Q9UQ80 394 aaKnown RBP13.99□□□□□ -0.17
PDXDC1-202ENST00000396410 CEMIPQ8WUJ3 1361 aa13.99□□□□□ -0.17
PDXDC1-202ENST00000396410 GRM8O00222 908 aa13.98□□□□□ -0.17
PDXDC1-202ENST00000396410 LINS1Q8NG48 757 aa13.98□□□□□ -0.17
PDXDC1-202ENST00000396410 PRAMEF22A3QJZ6 481 aa13.98□□□□□ -0.17
PDXDC1-202ENST00000396410 PRPF40AO75400 957 aaKnown RBP13.98□□□□□ -0.17
PDXDC1-202ENST00000396410 PROSER3Q2NL68 480 aa13.98□□□□□ -0.17
PDXDC1-202ENST00000396410 ZNF790Q6PG37 636 aa13.98□□□□□ -0.17
PDXDC1-202ENST00000396410 PRDM11Q9NQV5 511 aa13.98□□□□□ -0.17
PDXDC1-202ENST00000396410 DDX21Q9NR30 783 aaKnown RBP eCLIP13.98□□□□□ -0.17
PDXDC1-202ENST00000396410 EVA1CP58658 441 aa13.98□□□□□ -0.17
PDXDC1-202ENST00000396410 ZGPATQ8N5A5 531 aaKnown RBP13.98□□□□□ -0.17
PDXDC1-202ENST00000396410 TMX3Q96JJ7 454 aa13.98□□□□□ -0.17
PDXDC1-202ENST00000396410 GRPEL1Q9HAV7 217 aa13.98□□□□□ -0.17
PDXDC1-202ENST00000396410 CCDC9Q9Y3X0 531 aaKnown RBP13.98□□□□□ -0.17
PDXDC1-202ENST00000396410 AOX1Q06278 1338 aa13.97□□□□□ -0.17
PDXDC1-202ENST00000396410 ECHDC1Q9NTX5 307 aa13.97□□□□□ -0.17
PDXDC1-202ENST00000396410 STAP2Q9UGK3 403 aa13.97□□□□□ -0.17
PDXDC1-202ENST00000396410 ERBB3P21860 1342 aa13.97□□□□□ -0.17
PDXDC1-202ENST00000396410 ZKSCAN1P17029 563 aaPredicted RBP13.97□□□□□ -0.17
PDXDC1-202ENST00000396410 XAGE3Q8WTP9 111 aa13.97□□□□□ -0.17
PDXDC1-202ENST00000396410 ANAPC15P60006 121 aa13.97□□□□□ -0.17
PDXDC1-202ENST00000396410 COPS6Q7L5N1 327 aa13.97□□□□□ -0.17
PDXDC1-202ENST00000396410 A0A0G2JS52 829 aa13.96□□□□□ -0.17
PDXDC1-202ENST00000396410 CAVIN1Q6NZI2 390 aaKnown RBP13.96□□□□□ -0.17
PDXDC1-202ENST00000396410 UNC5CLQ8IV45 518 aa13.96□□□□□ -0.17
PDXDC1-202ENST00000396410 FSD1Q9BTV5 496 aa13.96□□□□□ -0.17
PDXDC1-202ENST00000396410 SLC52A2Q9HAB3 445 aa13.96□□□□□ -0.17
PDXDC1-202ENST00000396410 FMNL2Q96PY5 1086 aa13.96□□□□□ -0.17
PDXDC1-202ENST00000396410 CCDC8Q9H0W5 538 aaPredicted RBP13.96□□□□□ -0.17
PDXDC1-202ENST00000396410 PIP4K2AP48426 406 aaPredicted RBP13.96□□□□□ -0.17
PDXDC1-202ENST00000396410 TMEM94Q12767 1356 aa13.96□□□□□ -0.18
PDXDC1-202ENST00000396410 SNRPA1P09661 255 aaKnown RBP13.96□□□□□ -0.18
PDXDC1-202ENST00000396410 STRN4Q9NRL3 753 aa13.95□□□□□ -0.18
PDXDC1-202ENST00000396410 ISY1Q9ULR0 285 aaKnown RBP13.95□□□□□ -0.18
PDXDC1-202ENST00000396410 XRCC6P12956 609 aaKnown RBP eCLIP13.95□□□□□ -0.18
PDXDC1-202ENST00000396410 HSPA2P54652 639 aa13.95□□□□□ -0.18
PDXDC1-202ENST00000396410 POLA2Q14181 598 aa13.95□□□□□ -0.18
PDXDC1-202ENST00000396410 NCAPD2Q15021 1401 aa13.95□□□□□ -0.18
PDXDC1-202ENST00000396410 ANKRD13DQ6ZTN6 518 aa13.94□□□□□ -0.18
PDXDC1-202ENST00000396410 DDX54Q8TDD1 881 aaKnown RBP13.94□□□□□ -0.18
PDXDC1-202ENST00000396410 BICC1Q9H694 974 aaKnown RBP13.94□□□□□ -0.18
PDXDC1-202ENST00000396410 TTC41PQ6P2S7 1318 aa13.94□□□□□ -0.18
PDXDC1-202ENST00000396410 PXDNLA1KZ92 1463 aa13.94□□□□□ -0.18
PDXDC1-202ENST00000396410 JARID2Q92833 1246 aaPredicted RBP13.94□□□□□ -0.18
PDXDC1-202ENST00000396410 HIP1O00291 1037 aa13.94□□□□□ -0.18
PDXDC1-202ENST00000396410 DCAF5Q96JK2 942 aa13.94□□□□□ -0.18
PDXDC1-202ENST00000396410 PHKG2P15735 406 aa13.94□□□□□ -0.18
PDXDC1-202ENST00000396410 FGD1P98174 961 aa13.93□□□□□ -0.18
PDXDC1-202ENST00000396410 PALD1Q9ULE6 856 aa13.93□□□□□ -0.18
PDXDC1-202ENST00000396410 C1orf167Q5SNV9 1468 aa13.93□□□□□ -0.18
PDXDC1-202ENST00000396410 NCOA3Q9Y6Q9 1424 aa13.93□□□□□ -0.18
PDXDC1-202ENST00000396410 SUCLG2Q96I99 432 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms