RNA–Protein interactions for RNA: ENST00000396364.7

FXN-202, Transcript of frataxin, humanhuman

TSL 5 BASIC

Gene FXN, Length 980 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-202ENST00000396364 SPINK5Q9NQ38 1064 aaPredicted RBP27.51■■□□□ 1.99
FXN-202ENST00000396364 CYP19A1P11511 503 aaPredicted RBP27.5■■□□□ 1.99
FXN-202ENST00000396364 CRKLP46109 303 aaKnown RBP27.49■■□□□ 1.99
FXN-202ENST00000396364 CDCA7LQ96GN5 454 aa27.49■■□□□ 1.99
FXN-202ENST00000396364 CCDC87Q9NVE4 849 aa27.49■■□□□ 1.99
FXN-202ENST00000396364 ERBB4Q15303 1308 aa27.48■■□□□ 1.99
FXN-202ENST00000396364 TWISTNBQ3B726 338 aaPredicted RBP27.48■■□□□ 1.99
FXN-202ENST00000396364 USP16Q9Y5T5 823 aa27.48■■□□□ 1.99
FXN-202ENST00000396364 EXOSC9Q06265 439 aaKnown RBP27.47■■□□□ 1.99
FXN-202ENST00000396364 HDGFL1Q5TGJ6 251 aa27.47■■□□□ 1.99
FXN-202ENST00000396364 FLAD1Q8NFF5 587 aa27.47■■□□□ 1.99
FXN-202ENST00000396364 TFCP2L1Q9NZI6 479 aa27.47■■□□□ 1.99
FXN-202ENST00000396364 EIF2S2P20042 333 aaKnown RBP27.46■■□□□ 1.99
FXN-202ENST00000396364 SLC15A2Q16348 729 aa27.46■■□□□ 1.99
FXN-202ENST00000396364 TRMT2AQ8IZ69 625 aaKnown RBP27.46■■□□□ 1.99
FXN-202ENST00000396364 C8orf58Q8NAV2 365 aa27.46■■□□□ 1.99
FXN-202ENST00000396364 RTCBQ9Y3I0 505 aaKnown RBP27.46■■□□□ 1.99
FXN-202ENST00000396364 PRAMEF22A3QJZ6 481 aa27.45■■□□□ 1.98
FXN-202ENST00000396364 ELL2O00472 640 aaPredicted RBP27.45■■□□□ 1.98
FXN-202ENST00000396364 GNPATO15228 680 aa27.45■■□□□ 1.98
FXN-202ENST00000396364 KRT24Q2M2I5 525 aa27.45■■□□□ 1.98
FXN-202ENST00000396364 AKT1S1Q96B36 256 aa27.45■■□□□ 1.98
FXN-202ENST00000396364 CT47B1P0C2W7 299 aaPredicted RBP27.44■■□□□ 1.98
FXN-202ENST00000396364 CCDC30Q5VVM6 783 aa27.44■■□□□ 1.98
FXN-202ENST00000396364 RPS6KA4O75676 772 aa27.43■■□□□ 1.98
FXN-202ENST00000396364 QSER1Q2KHR3 1735 aa27.42■■□□□ 1.98
FXN-202ENST00000396364 ADRA2BP18089 450 aa27.42■■□□□ 1.98
FXN-202ENST00000396364 SSFA2P28290 1259 aa27.42■■□□□ 1.98
FXN-202ENST00000396364 INTS5Q6P9B9 1019 aaKnown RBP27.42■■□□□ 1.98
FXN-202ENST00000396364 ZNF428Q96B54 188 aa27.42■■□□□ 1.98
FXN-202ENST00000396364 STK31Q9BXU1 1019 aa27.42■■□□□ 1.98
FXN-202ENST00000396364 MYH14Q7Z406 1995 aaKnown RBP27.41■■□□□ 1.98
FXN-202ENST00000396364 UBR3Q6ZT12 1888 aa27.41■■□□□ 1.98
FXN-202ENST00000396364 CANXP27824 592 aaKnown RBP27.41■■□□□ 1.98
FXN-202ENST00000396364 IL6STP40189 918 aaPredicted RBP27.41■■□□□ 1.98
FXN-202ENST00000396364 DBF4Q9UBU7 674 aaPredicted RBP27.41■■□□□ 1.98
FXN-202ENST00000396364 ZBTB1Q9Y2K1 713 aa27.41■■□□□ 1.98
FXN-202ENST00000396364 A0A087WZG4 1122 aa27.4■■□□□ 1.98
FXN-202ENST00000396364 A1BGP04217 495 aa27.4■■□□□ 1.98
FXN-202ENST00000396364 ZNF827Q17R98 1081 aa27.4■■□□□ 1.98
FXN-202ENST00000396364 TSPYL6Q8N831 410 aa27.4■■□□□ 1.98
FXN-202ENST00000396364 ANO8Q9HCE9 1232 aaPredicted RBP27.4■■□□□ 1.98
FXN-202ENST00000396364 TRAPPC3LQ5T215 181 aa27.39■■□□□ 1.98
FXN-202ENST00000396364 VAMP4O75379 141 aa27.38■■□□□ 1.97
FXN-202ENST00000396364 NECTIN2Q92692 538 aa27.38■■□□□ 1.97
FXN-202ENST00000396364 ZNF330Q9Y3S2 320 aaPredicted RBP27.38■■□□□ 1.97
FXN-202ENST00000396364 DDX21Q9NR30 783 aaKnown RBP eCLIP27.37■■□□□ 1.97
FXN-202ENST00000396364 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP27.36■■□□□ 1.97
FXN-202ENST00000396364 PHF14O94880 888 aa27.36■■□□□ 1.97
FXN-202ENST00000396364 HYPKQ9NX55 129 aa27.36■■□□□ 1.97
FXN-202ENST00000396364 CACNA1FO60840 1977 aa27.36■■□□□ 1.97
FXN-202ENST00000396364 COL15A1P39059 1388 aa27.35■■□□□ 1.97
FXN-202ENST00000396364 TUBGCP6Q96RT7 1819 aa27.35■■□□□ 1.97
FXN-202ENST00000396364 EIF5P55010 431 aaKnown RBP27.35■■□□□ 1.97
FXN-202ENST00000396364 MSH5O43196 834 aa27.34■■□□□ 1.97
FXN-202ENST00000396364 MYL6BP14649 208 aa27.34■■□□□ 1.97
FXN-202ENST00000396364 RFC4P35249 363 aa27.34■■□□□ 1.97
FXN-202ENST00000396364 CHPF2Q9P2E5 772 aa27.34■■□□□ 1.97
FXN-202ENST00000396364 R3HDM1Q15032 1099 aaKnown RBP27.33■■□□□ 1.97
FXN-202ENST00000396364 NBPF26B4DH59 902 aa27.32■■□□□ 1.96
FXN-202ENST00000396364 NBPF10Q6P3W6 841 aaKnown RBP27.32■■□□□ 1.96
FXN-202ENST00000396364 NBPF15Q8N660 670 aa27.32■■□□□ 1.96
FXN-202ENST00000396364 ARXQ96QS3 562 aa27.32■■□□□ 1.96
FXN-202ENST00000396364 PNPLA7Q6ZV29 1317 aa27.32■■□□□ 1.96
FXN-202ENST00000396364 ZPR1O75312 459 aa27.31■■□□□ 1.96
FXN-202ENST00000396364 KIF6Q6ZMV9 814 aa27.31■■□□□ 1.96
FXN-202ENST00000396364 PIP4K2AP48426 406 aaPredicted RBP27.3■■□□□ 1.96
FXN-202ENST00000396364 ALDH1L2Q3SY69 923 aa27.3■■□□□ 1.96
FXN-202ENST00000396364 SLC16A10Q8TF71 515 aa27.3■■□□□ 1.96
FXN-202ENST00000396364 ARHGEF1Q92888 912 aaKnown RBP27.3■■□□□ 1.96
FXN-202ENST00000396364 PDIA6Q15084 440 aa27.29■■□□□ 1.96
FXN-202ENST00000396364 C4AP0C0L4 1744 aa27.28■■□□□ 1.96
FXN-202ENST00000396364 SLC4A2P04920 1241 aa27.28■■□□□ 1.96
FXN-202ENST00000396364 DZIP3Q86Y13 1208 aaKnown RBP27.28■■□□□ 1.96
FXN-202ENST00000396364 COL23A1Q86Y22 540 aaPredicted RBP27.28■■□□□ 1.96
FXN-202ENST00000396364 DDX58O95786 925 aaKnown RBP27.27■■□□□ 1.96
FXN-202ENST00000396364 NARFQ9UHQ1 456 aa27.27■■□□□ 1.96
FXN-202ENST00000396364 ZNF652Q9Y2D9 606 aa27.27■■□□□ 1.96
FXN-202ENST00000396364 PSDA5PKW4 1024 aaPredicted RBP27.26■■□□□ 1.95
FXN-202ENST00000396364 RGL2O15211 777 aa27.25■■□□□ 1.95
FXN-202ENST00000396364 ANXA1P04083 346 aa27.25■■□□□ 1.95
FXN-202ENST00000396364 PROSER3Q2NL68 480 aa27.25■■□□□ 1.95
FXN-202ENST00000396364 USP42Q9H9J4 1324 aaKnown RBP27.24■■□□□ 1.95
FXN-202ENST00000396364 COPS6Q7L5N1 327 aa27.24■■□□□ 1.95
FXN-202ENST00000396364 AMIGO3Q86WK7 504 aa27.24■■□□□ 1.95
FXN-202ENST00000396364 XAGE3Q8WTP9 111 aa27.24■■□□□ 1.95
FXN-202ENST00000396364 SMC4Q9NTJ3 1288 aa27.24■■□□□ 1.95
FXN-202ENST00000396364 TBC1D2BQ9UPU7 963 aa27.24■■□□□ 1.95
FXN-202ENST00000396364 TCERG1O14776 1098 aaKnown RBP27.23■■□□□ 1.95
FXN-202ENST00000396364 AIMP1Q12904 312 aaKnown RBP27.23■■□□□ 1.95
FXN-202ENST00000396364 CASZ1Q86V15 1759 aa27.22■■□□□ 1.95
FXN-202ENST00000396364 SCN7AQ01118 1682 aa27.22■■□□□ 1.95
FXN-202ENST00000396364 ERVV-1B6SEH8 477 aa27.22■■□□□ 1.95
FXN-202ENST00000396364 LRP10Q7Z4F1 713 aa27.22■■□□□ 1.95
FXN-202ENST00000396364 MAP3K15Q6ZN16 1313 aa27.21■■□□□ 1.95
FXN-202ENST00000396364 SMIM5Q71RC9 77 aa27.21■■□□□ 1.95
FXN-202ENST00000396364 NLGN1Q8N2Q7 840 aa27.21■■□□□ 1.95
FXN-202ENST00000396364 SSH1Q8WYL5 1049 aa27.21■■□□□ 1.95
FXN-202ENST00000396364 BCORQ6W2J9 1755 aa27.21■■□□□ 1.95
FXN-202ENST00000396364 RARSP54136 660 aaKnown RBP27.2■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms