RNA–Protein interactions for RNA: ENST00000396205.6

LMO3-205, Transcript of LIM domain only 3, humanhuman

TSL 5

Gene LMO3, Length 3,534 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-205ENST00000396205 HOXB7P09629 217 aa8.76□□□□□ -1.01
LMO3-205ENST00000396205 EIF5P55010 431 aaKnown RBP8.76□□□□□ -1.01
LMO3-205ENST00000396205 NARFQ9UHQ1 456 aa8.76□□□□□ -1.01
LMO3-205ENST00000396205 FER1L6Q2WGJ9 1857 aa8.76□□□□□ -1.01
LMO3-205ENST00000396205 GYS1P13807 737 aa8.76□□□□□ -1.01
LMO3-205ENST00000396205 TM4SF1P30408 202 aa8.76□□□□□ -1.01
LMO3-205ENST00000396205 AMIGO3Q86WK7 504 aa8.76□□□□□ -1.01
LMO3-205ENST00000396205 FHDC1Q9C0D6 1143 aaPredicted RBP8.76□□□□□ -1.01
LMO3-205ENST00000396205 PPP1R1BQ9UD71 204 aaPredicted RBP8.76□□□□□ -1.01
LMO3-205ENST00000396205 LRRC37AA6NMS7 1700 aa8.76□□□□□ -1.01
LMO3-205ENST00000396205 NGEFQ8N5V2 710 aa8.76□□□□□ -1.01
LMO3-205ENST00000396205 GNPATO15228 680 aa8.75□□□□□ -1.01
LMO3-205ENST00000396205 STARD3NLO95772 234 aa8.75□□□□□ -1.01
LMO3-205ENST00000396205 U2AF1L5P0DN76 240 aaPredicted RBP8.75□□□□□ -1.01
LMO3-205ENST00000396205 U2AF1Q01081 240 aaKnown RBP eCLIP8.75□□□□□ -1.01
LMO3-205ENST00000396205 TEFQ10587 303 aa8.75□□□□□ -1.01
LMO3-205ENST00000396205 CCDC27Q2M243 656 aa8.75□□□□□ -1.01
LMO3-205ENST00000396205 SBF1O95248 1867 aa8.75□□□□□ -1.01
LMO3-205ENST00000396205 U2SURPO15042 1029 aaKnown RBP8.75□□□□□ -1.01
LMO3-205ENST00000396205 TAF7Q15545 349 aaPredicted RBP8.75□□□□□ -1.01
LMO3-205ENST00000396205 CLEC4GQ6UXB4 293 aa8.75□□□□□ -1.01
LMO3-205ENST00000396205 ARHGEF1Q92888 912 aaKnown RBP8.75□□□□□ -1.01
LMO3-205ENST00000396205 NEFMP07197 916 aa8.74□□□□□ -1.01
LMO3-205ENST00000396205 TTC5Q8N0Z6 440 aa8.74□□□□□ -1.01
LMO3-205ENST00000396205 TIAM2Q8IVF5 1701 aa8.74□□□□□ -1.01
LMO3-205ENST00000396205 RNF123Q5XPI4 1314 aa8.74□□□□□ -1.01
LMO3-205ENST00000396205 GRIN3BO60391 1043 aa8.74□□□□□ -1.01
LMO3-205ENST00000396205 RUNDC1Q96C34 613 aa8.74□□□□□ -1.01
LMO3-205ENST00000396205 DCAF8L1A6NGE4 600 aa8.74□□□□□ -1.01
LMO3-205ENST00000396205 SNRPA1P09661 255 aaKnown RBP8.74□□□□□ -1.01
LMO3-205ENST00000396205 RTF1Q92541 710 aaKnown RBP8.74□□□□□ -1.01
LMO3-205ENST00000396205 ZC3H4Q9UPT8 1303 aaKnown RBP8.73□□□□□ -1.01
LMO3-205ENST00000396205 BTBD11A6QL63 1104 aa8.73□□□□□ -1.01
LMO3-205ENST00000396205 CARMIL3Q8ND23 1372 aa8.73□□□□□ -1.01
LMO3-205ENST00000396205 POLRMTO00411 1230 aaKnown RBP8.72□□□□□ -1.01
LMO3-205ENST00000396205 ZNF496Q96IT1 587 aaPredicted RBP8.72□□□□□ -1.01
LMO3-205ENST00000396205 ATF5Q9Y2D1 282 aaPredicted RBP8.72□□□□□ -1.01
LMO3-205ENST00000396205 DNAJC10Q8IXB1 793 aa8.72□□□□□ -1.01
LMO3-205ENST00000396205 IL16Q14005 1332 aa8.72□□□□□ -1.01
LMO3-205ENST00000396205 MAPK8IP3Q9UPT6 1336 aa8.72□□□□□ -1.01
LMO3-205ENST00000396205 ERVV-1B6SEH8 477 aa8.72□□□□□ -1.01
LMO3-205ENST00000396205 RFC4P35249 363 aa8.72□□□□□ -1.01
LMO3-205ENST00000396205 RBM42Q9BTD8 480 aaKnown RBP8.72□□□□□ -1.01
LMO3-205ENST00000396205 DDX60Q8IY21 1712 aaKnown RBP8.72□□□□□ -1.01
LMO3-205ENST00000396205 KLRG2A4D1S0 409 aaPredicted RBP8.71□□□□□ -1.01
LMO3-205ENST00000396205 TMPOP42166 694 aaKnown RBP8.71□□□□□ -1.01
LMO3-205ENST00000396205 ZNF316A6NFI3 1004 aaPredicted RBP8.71□□□□□ -1.02
LMO3-205ENST00000396205 ZNF853P0CG23 659 aa8.71□□□□□ -1.02
LMO3-205ENST00000396205 EIF4A1P60842 406 aaKnown RBP8.71□□□□□ -1.02
LMO3-205ENST00000396205 CALD1Q05682 793 aaKnown RBP8.71□□□□□ -1.02
LMO3-205ENST00000396205 BCL2L12Q9HB09 334 aa8.71□□□□□ -1.02
LMO3-205ENST00000396205 KCNQ4P56696 695 aa8.71□□□□□ -1.02
LMO3-205ENST00000396205 CHMP4AQ9BY43 222 aa8.71□□□□□ -1.02
LMO3-205ENST00000396205 WDR90Q96KV7 1748 aa8.7□□□□□ -1.02
LMO3-205ENST00000396205 CHL1O00533 1208 aa8.7□□□□□ -1.02
LMO3-205ENST00000396205 LRP10Q7Z4F1 713 aa8.7□□□□□ -1.02
LMO3-205ENST00000396205 CAMTA2O94983 1202 aa8.7□□□□□ -1.02
LMO3-205ENST00000396205 ZBTB1Q9Y2K1 713 aa8.7□□□□□ -1.02
LMO3-205ENST00000396205 SNED1Q8TER0 1413 aa8.7□□□□□ -1.02
LMO3-205ENST00000396205 GIGYF1O75420 1035 aaPredicted RBP8.7□□□□□ -1.02
LMO3-205ENST00000396205 DDX10Q13206 875 aaKnown RBP8.7□□□□□ -1.02
LMO3-205ENST00000396205 TRIM35Q9UPQ4 493 aa8.69□□□□□ -1.02
LMO3-205ENST00000396205 PARP3Q9Y6F1 533 aa8.69□□□□□ -1.02
LMO3-205ENST00000396205 LTBP1Q14766 1721 aa8.69□□□□□ -1.02
LMO3-205ENST00000396205 LTBP3Q9NS15 1303 aa8.69□□□□□ -1.02
LMO3-205ENST00000396205 MMP10P09238 476 aa8.69□□□□□ -1.02
LMO3-205ENST00000396205 ZPR1O75312 459 aa8.68□□□□□ -1.02
LMO3-205ENST00000396205 DDR1Q08345 913 aa8.68□□□□□ -1.02
LMO3-205ENST00000396205 IFT57Q9NWB7 429 aa8.68□□□□□ -1.02
LMO3-205ENST00000396205 PTCD1O75127 700 aaKnown RBP8.68□□□□□ -1.02
LMO3-205ENST00000396205 KCNA3P22001 575 aa8.68□□□□□ -1.02
LMO3-205ENST00000396205 SLC39A6Q13433 755 aa8.68□□□□□ -1.02
LMO3-205ENST00000396205 ZNF652Q9Y2D9 606 aa8.68□□□□□ -1.02
LMO3-205ENST00000396205 CFAP44Q96MT7 982 aa8.68□□□□□ -1.02
LMO3-205ENST00000396205 WDR43Q15061 677 aaKnown RBP eCLIP8.67□□□□□ -1.02
LMO3-205ENST00000396205 GRIPAP1Q4V328 841 aa8.67□□□□□ -1.02
LMO3-205ENST00000396205 MCM10Q7L590 875 aa8.67□□□□□ -1.02
LMO3-205ENST00000396205 NLGN2Q8NFZ4 835 aa8.67□□□□□ -1.02
LMO3-205ENST00000396205 FKBP8Q14318 412 aa8.67□□□□□ -1.02
LMO3-205ENST00000396205 PHF14O94880 888 aa8.66□□□□□ -1.02
LMO3-205ENST00000396205 BRIP1Q9BX63 1249 aa8.66□□□□□ -1.02
LMO3-205ENST00000396205 CACNA1SQ13698 1873 aa8.66□□□□□ -1.02
LMO3-205ENST00000396205 RIPK4P57078 832 aa8.66□□□□□ -1.02
LMO3-205ENST00000396205 NFIXQ14938 502 aa8.66□□□□□ -1.02
LMO3-205ENST00000396205 USPL1Q5W0Q7 1092 aa8.66□□□□□ -1.02
LMO3-205ENST00000396205 STYK1Q6J9G0 422 aa8.66□□□□□ -1.02
LMO3-205ENST00000396205 MYH3P11055 1940 aa8.66□□□□□ -1.02
LMO3-205ENST00000396205 YBX3P16989 372 aaKnown RBP eCLIP8.66□□□□□ -1.02
LMO3-205ENST00000396205 ADAMTS8Q9UP79 889 aa8.66□□□□□ -1.02
LMO3-205ENST00000396205 SCN4AP35499 1836 aa8.65□□□□□ -1.02
LMO3-205ENST00000396205 MAP3K15Q6ZN16 1313 aa8.65□□□□□ -1.02
LMO3-205ENST00000396205 NBPF26B4DH59 902 aa8.65□□□□□ -1.02
LMO3-205ENST00000396205 NBPF10Q6P3W6 841 aaKnown RBP8.65□□□□□ -1.02
LMO3-205ENST00000396205 NBPF15Q8N660 670 aa8.65□□□□□ -1.02
LMO3-205ENST00000396205 ADAMTSL1Q8N6G6 1762 aa8.65□□□□□ -1.02
LMO3-205ENST00000396205 PSME4Q14997 1843 aa8.65□□□□□ -1.02
LMO3-205ENST00000396205 PDIA6Q15084 440 aa8.65□□□□□ -1.02
LMO3-205ENST00000396205 PDE6BP35913 854 aa8.64□□□□□ -1.03
LMO3-205ENST00000396205 SOGA3Q5TF21 947 aa8.64□□□□□ -1.03
LMO3-205ENST00000396205 KCNQ3O43525 872 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms