RNA–Protein interactions for RNA: ENST00000396083.6

THUMPD1-202, Transcript of THUMP domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene THUMPD1, Length 2,624 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD1-202ENST00000396083 CYP19A1P11511 503 aaPredicted RBP13.17□□□□□ -0.3
THUMPD1-202ENST00000396083 MBIPQ9NS73 344 aa13.17□□□□□ -0.3
THUMPD1-202ENST00000396083 EIF4A1P60842 406 aaKnown RBP13.16□□□□□ -0.3
THUMPD1-202ENST00000396083 PPP1R1BQ9UD71 204 aaPredicted RBP13.16□□□□□ -0.3
THUMPD1-202ENST00000396083 TUBGCP6Q96RT7 1819 aa13.16□□□□□ -0.3
THUMPD1-202ENST00000396083 PAPPAQ13219 1627 aa13.16□□□□□ -0.3
THUMPD1-202ENST00000396083 TCERG1O14776 1098 aaKnown RBP13.16□□□□□ -0.3
THUMPD1-202ENST00000396083 INTS5Q6P9B9 1019 aaKnown RBP13.16□□□□□ -0.3
THUMPD1-202ENST00000396083 SPINK5Q9NQ38 1064 aaPredicted RBP13.16□□□□□ -0.3
THUMPD1-202ENST00000396083 SRP68Q9UHB9 627 aaKnown RBP13.16□□□□□ -0.3
THUMPD1-202ENST00000396083 STARD3NLO95772 234 aa13.15□□□□□ -0.3
THUMPD1-202ENST00000396083 SNRPA1P09661 255 aaKnown RBP13.15□□□□□ -0.3
THUMPD1-202ENST00000396083 MYL6BP14649 208 aa13.15□□□□□ -0.3
THUMPD1-202ENST00000396083 ARHGEF1Q92888 912 aaKnown RBP13.15□□□□□ -0.3
THUMPD1-202ENST00000396083 CCDC87Q9NVE4 849 aa13.15□□□□□ -0.3
THUMPD1-202ENST00000396083 ZNF428Q96B54 188 aa13.15□□□□□ -0.3
THUMPD1-202ENST00000396083 TBC1D2BQ9UPU7 963 aa13.15□□□□□ -0.3
THUMPD1-202ENST00000396083 CHL1O00533 1208 aa13.14□□□□□ -0.31
THUMPD1-202ENST00000396083 GIGYF1O75420 1035 aaPredicted RBP13.14□□□□□ -0.31
THUMPD1-202ENST00000396083 TRAPPC3LQ5T215 181 aa13.14□□□□□ -0.31
THUMPD1-202ENST00000396083 CFAP44Q96MT7 982 aa13.14□□□□□ -0.31
THUMPD1-202ENST00000396083 TJP1Q07157 1748 aa13.14□□□□□ -0.31
THUMPD1-202ENST00000396083 RFC4P35249 363 aa13.14□□□□□ -0.31
THUMPD1-202ENST00000396083 HNRNPUQ00839 825 aaKnown RBP eCLIP13.14□□□□□ -0.31
THUMPD1-202ENST00000396083 NPM2Q86SE8 214 aaKnown RBP13.13□□□□□ -0.31
THUMPD1-202ENST00000396083 UBR2Q8IWV8 1755 aa13.13□□□□□ -0.31
THUMPD1-202ENST00000396083 UBR3Q6ZT12 1888 aa13.13□□□□□ -0.31
THUMPD1-202ENST00000396083 WWC3Q9ULE0 1092 aa13.13□□□□□ -0.31
THUMPD1-202ENST00000396083 RPS6KA4O75676 772 aa13.12□□□□□ -0.31
THUMPD1-202ENST00000396083 VSIG10Q8N0Z9 540 aa13.12□□□□□ -0.31
THUMPD1-202ENST00000396083 CNTNAP4Q9C0A0 1308 aa13.12□□□□□ -0.31
THUMPD1-202ENST00000396083 BICDL1Q6ZP65 573 aa13.12□□□□□ -0.31
THUMPD1-202ENST00000396083 TSPYL6Q8N831 410 aa13.12□□□□□ -0.31
THUMPD1-202ENST00000396083 CDCA7LQ96GN5 454 aa13.12□□□□□ -0.31
THUMPD1-202ENST00000396083 SPON1Q9HCB6 807 aa13.12□□□□□ -0.31
THUMPD1-202ENST00000396083 SUPT16HQ9Y5B9 1047 aaKnown RBP13.12□□□□□ -0.31
THUMPD1-202ENST00000396083 COL5A3P25940 1745 aaPredicted RBP13.12□□□□□ -0.31
THUMPD1-202ENST00000396083 GNAI1P63096 354 aa13.11□□□□□ -0.31
THUMPD1-202ENST00000396083 C8orf58Q8NAV2 365 aa13.11□□□□□ -0.31
THUMPD1-202ENST00000396083 NBPF26B4DH59 902 aa13.11□□□□□ -0.31
THUMPD1-202ENST00000396083 SSFA2P28290 1259 aa13.11□□□□□ -0.31
THUMPD1-202ENST00000396083 PROSER3Q2NL68 480 aa13.11□□□□□ -0.31
THUMPD1-202ENST00000396083 USPL1Q5W0Q7 1092 aa13.11□□□□□ -0.31
THUMPD1-202ENST00000396083 NBPF10Q6P3W6 841 aaKnown RBP13.11□□□□□ -0.31
THUMPD1-202ENST00000396083 NBPF15Q8N660 670 aa13.11□□□□□ -0.31
THUMPD1-202ENST00000396083 KDM3BQ7LBC6 1761 aa13.11□□□□□ -0.31
THUMPD1-202ENST00000396083 AIMP1Q12904 312 aaKnown RBP13.1□□□□□ -0.31
THUMPD1-202ENST00000396083 DUSP27Q5VZP5 1158 aa13.1□□□□□ -0.31
THUMPD1-202ENST00000396083 MTFR1LQ9H019 292 aa13.1□□□□□ -0.31
THUMPD1-202ENST00000396083 IFT57Q9NWB7 429 aa13.1□□□□□ -0.31
THUMPD1-202ENST00000396083 RC3H1Q5TC82 1133 aaKnown RBP13.1□□□□□ -0.31
THUMPD1-202ENST00000396083 COL15A1P39059 1388 aa13.1□□□□□ -0.31
THUMPD1-202ENST00000396083 ZPR1O75312 459 aa13.09□□□□□ -0.31
THUMPD1-202ENST00000396083 ZNF853P0CG23 659 aa13.09□□□□□ -0.31
THUMPD1-202ENST00000396083 CALD1Q05682 793 aaKnown RBP13.09□□□□□ -0.31
THUMPD1-202ENST00000396083 TEX13AQ9BXU3 409 aaPredicted RBP13.09□□□□□ -0.31
THUMPD1-202ENST00000396083 FKBP8Q14318 412 aa13.09□□□□□ -0.31
THUMPD1-202ENST00000396083 HDGFL1Q5TGJ6 251 aa13.09□□□□□ -0.31
THUMPD1-202ENST00000396083 SOS1Q07889 1333 aaPredicted RBP13.09□□□□□ -0.31
THUMPD1-202ENST00000396083 FANCIQ9NVI1 1328 aa13.09□□□□□ -0.31
THUMPD1-202ENST00000396083 CCDC27Q2M243 656 aa13.09□□□□□ -0.31
THUMPD1-202ENST00000396083 FAM177BA6PVY3 158 aa13.08□□□□□ -0.32
THUMPD1-202ENST00000396083 PTGER2P43116 358 aa13.08□□□□□ -0.32
THUMPD1-202ENST00000396083 CHPF2Q9P2E5 772 aa13.08□□□□□ -0.32
THUMPD1-202ENST00000396083 MMP10P09238 476 aa13.08□□□□□ -0.32
THUMPD1-202ENST00000396083 GYS1P13807 737 aa13.08□□□□□ -0.32
THUMPD1-202ENST00000396083 EIF5P55010 431 aaKnown RBP13.08□□□□□ -0.32
THUMPD1-202ENST00000396083 EXOSC9Q06265 439 aaKnown RBP13.08□□□□□ -0.32
THUMPD1-202ENST00000396083 CCDC24Q8N4L8 307 aa13.08□□□□□ -0.32
THUMPD1-202ENST00000396083 FLAD1Q8NFF5 587 aa13.08□□□□□ -0.32
THUMPD1-202ENST00000396083 ZBTB3Q9H5J0 574 aa13.08□□□□□ -0.32
THUMPD1-202ENST00000396083 TTLL7Q6ZT98 887 aa13.07□□□□□ -0.32
THUMPD1-202ENST00000396083 DZIP3Q86Y13 1208 aaKnown RBP13.07□□□□□ -0.32
THUMPD1-202ENST00000396083 ANP32EQ9BTT0 268 aa13.07□□□□□ -0.32
THUMPD1-202ENST00000396083 CASZ1Q86V15 1759 aa13.07□□□□□ -0.32
THUMPD1-202ENST00000396083 USP42Q9H9J4 1324 aaKnown RBP13.06□□□□□ -0.32
THUMPD1-202ENST00000396083 POLD1P28340 1107 aa13.06□□□□□ -0.32
THUMPD1-202ENST00000396083 IL6STP40189 918 aaPredicted RBP13.06□□□□□ -0.32
THUMPD1-202ENST00000396083 GOLGA2Q08379 1002 aa13.06□□□□□ -0.32
THUMPD1-202ENST00000396083 C4AP0C0L4 1744 aa13.05□□□□□ -0.32
THUMPD1-202ENST00000396083 TWISTNBQ3B726 338 aaPredicted RBP13.05□□□□□ -0.32
THUMPD1-202ENST00000396083 WDR63Q8IWG1 891 aa13.05□□□□□ -0.32
THUMPD1-202ENST00000396083 TSHZ2Q9NRE2 1034 aa13.05□□□□□ -0.32
THUMPD1-202ENST00000396083 SLC16A10Q8TF71 515 aa13.05□□□□□ -0.32
THUMPD1-202ENST00000396083 FHDC1Q9C0D6 1143 aaPredicted RBP13.05□□□□□ -0.32
THUMPD1-202ENST00000396083 BABAM1Q9NWV8 329 aa13.05□□□□□ -0.32
THUMPD1-202ENST00000396083 ADRA2BP18089 450 aa13.04□□□□□ -0.32
THUMPD1-202ENST00000396083 PDIA6Q15084 440 aa13.04□□□□□ -0.32
THUMPD1-202ENST00000396083 HLFQ16534 295 aa13.04□□□□□ -0.32
THUMPD1-202ENST00000396083 COPS6Q7L5N1 327 aa13.04□□□□□ -0.32
THUMPD1-202ENST00000396083 PHAXQ9H814 394 aaKnown RBP13.04□□□□□ -0.32
THUMPD1-202ENST00000396083 ZNF831Q5JPB2 1677 aa13.04□□□□□ -0.32
THUMPD1-202ENST00000396083 BCL2L13Q9BXK5 485 aa13.04□□□□□ -0.32
THUMPD1-202ENST00000396083 BCL2L12Q9HB09 334 aa13.04□□□□□ -0.32
THUMPD1-202ENST00000396083 NARFQ9UHQ1 456 aa13.04□□□□□ -0.32
THUMPD1-202ENST00000396083 ZNF521Q96K83 1311 aa13.04□□□□□ -0.32
THUMPD1-202ENST00000396083 NPHP1O15259 732 aa13.03□□□□□ -0.32
THUMPD1-202ENST00000396083 GPTP24298 496 aa13.03□□□□□ -0.32
THUMPD1-202ENST00000396083 HMGB2P26583 209 aaKnown RBP13.03□□□□□ -0.32
THUMPD1-202ENST00000396083 TBC1D9BQ66K14 1250 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms