RNA–Protein interactions for RNA: ENST00000395305.7

HLA-DMA-203, Transcript of major histocompatibility complex, class II, DM alpha, humanhuman

BASIC

Gene HLA-DMA, Length 777 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMA-203ENST00000395305 ZBTB1Q9Y2K1 713 aa18.48■□□□□ 0.55
HLA-DMA-203ENST00000395305 USP42Q9H9J4 1324 aaKnown RBP18.48■□□□□ 0.55
HLA-DMA-203ENST00000395305 CANXP27824 592 aaKnown RBP18.47■□□□□ 0.55
HLA-DMA-203ENST00000395305 EIF5P55010 431 aaKnown RBP18.47■□□□□ 0.55
HLA-DMA-203ENST00000395305 WDR43Q15061 677 aaKnown RBP eCLIP18.47■□□□□ 0.55
HLA-DMA-203ENST00000395305 PNISRQ8TF01 805 aaKnown RBP18.47■□□□□ 0.55
HLA-DMA-203ENST00000395305 NARFQ9UHQ1 456 aa18.47■□□□□ 0.55
HLA-DMA-203ENST00000395305 DLG5Q8TDM6 1919 aa18.47■□□□□ 0.55
HLA-DMA-203ENST00000395305 SNRPA1P09661 255 aaKnown RBP18.46■□□□□ 0.55
HLA-DMA-203ENST00000395305 RIPK4P57078 832 aa18.46■□□□□ 0.55
HLA-DMA-203ENST00000395305 PARP3Q9Y6F1 533 aa18.46■□□□□ 0.55
HLA-DMA-203ENST00000395305 A0A087WZG4 1122 aa18.45■□□□□ 0.54
HLA-DMA-203ENST00000395305 TMPOP42166 694 aaKnown RBP18.45■□□□□ 0.54
HLA-DMA-203ENST00000395305 FKBP8Q14318 412 aa18.45■□□□□ 0.54
HLA-DMA-203ENST00000395305 MIS18AQ9NYP9 233 aa18.45■□□□□ 0.54
HLA-DMA-203ENST00000395305 ADAMTS8Q9UP79 889 aa18.45■□□□□ 0.54
HLA-DMA-203ENST00000395305 C4AP0C0L4 1744 aa18.44■□□□□ 0.54
HLA-DMA-203ENST00000395305 A1BGP04217 495 aa18.44■□□□□ 0.54
HLA-DMA-203ENST00000395305 TM4SF1P30408 202 aa18.44■□□□□ 0.54
HLA-DMA-203ENST00000395305 USPL1Q5W0Q7 1092 aa18.44■□□□□ 0.54
HLA-DMA-203ENST00000395305 RUNDC1Q96C34 613 aa18.44■□□□□ 0.54
HLA-DMA-203ENST00000395305 USP16Q9Y5T5 823 aa18.44■□□□□ 0.54
HLA-DMA-203ENST00000395305 COL15A1P39059 1388 aa18.43■□□□□ 0.54
HLA-DMA-203ENST00000395305 YY1P25490 414 aa18.43■□□□□ 0.54
HLA-DMA-203ENST00000395305 IL6STP40189 918 aaPredicted RBP18.43■□□□□ 0.54
HLA-DMA-203ENST00000395305 GOLGB1Q14789 3259 aaKnown RBP18.42■□□□□ 0.54
HLA-DMA-203ENST00000395305 LMOD3Q0VAK6 560 aa18.42■□□□□ 0.54
HLA-DMA-203ENST00000395305 PELP1Q8IZL8 1130 aaKnown RBP18.42■□□□□ 0.54
HLA-DMA-203ENST00000395305 THUMPD2Q9BTF0 503 aaKnown RBP18.42■□□□□ 0.54
HLA-DMA-203ENST00000395305 GRIN3BO60391 1043 aa18.41■□□□□ 0.54
HLA-DMA-203ENST00000395305 TGFB2P61812 414 aa18.41■□□□□ 0.54
HLA-DMA-203ENST00000395305 CCDC146Q8IYE0 955 aa18.41■□□□□ 0.54
HLA-DMA-203ENST00000395305 UTRNP46939 3433 aa18.41■□□□□ 0.54
HLA-DMA-203ENST00000395305 PRAMEF22A3QJZ6 481 aa18.4■□□□□ 0.54
HLA-DMA-203ENST00000395305 NPM2Q86SE8 214 aaKnown RBP18.4■□□□□ 0.54
HLA-DMA-203ENST00000395305 BCL2L12Q9HB09 334 aa18.4■□□□□ 0.54
HLA-DMA-203ENST00000395305 BABAM1Q9NWV8 329 aa18.4■□□□□ 0.54
HLA-DMA-203ENST00000395305 POLRMTO00411 1230 aaKnown RBP18.39■□□□□ 0.53
HLA-DMA-203ENST00000395305 YBX3P16989 372 aaKnown RBP eCLIP18.39■□□□□ 0.53
HLA-DMA-203ENST00000395305 EIF4A1P60842 406 aaKnown RBP18.39■□□□□ 0.53
HLA-DMA-203ENST00000395305 DDR1Q08345 913 aa18.39■□□□□ 0.53
HLA-DMA-203ENST00000395305 GIGYF1O75420 1035 aaPredicted RBP18.38■□□□□ 0.53
HLA-DMA-203ENST00000395305 NFIXQ14938 502 aa18.38■□□□□ 0.53
HLA-DMA-203ENST00000395305 NEUROD2Q15784 382 aa18.38■□□□□ 0.53
HLA-DMA-203ENST00000395305 TBC1D2BQ9UPU7 963 aa18.38■□□□□ 0.53
HLA-DMA-203ENST00000395305 RRP7AQ9Y3A4 280 aaKnown RBP18.37■□□□□ 0.53
HLA-DMA-203ENST00000395305 ZNF330Q9Y3S2 320 aaPredicted RBP18.37■□□□□ 0.53
HLA-DMA-203ENST00000395305 KIF13BQ9NQT8 1826 aa18.37■□□□□ 0.53
HLA-DMA-203ENST00000395305 A0A0G2JLW4 131 aa18.36■□□□□ 0.53
HLA-DMA-203ENST00000395305 CHD4Q14839 1912 aa18.36■□□□□ 0.53
HLA-DMA-203ENST00000395305 C10orf71Q711Q0 1435 aa18.36■□□□□ 0.53
HLA-DMA-203ENST00000395305 TSPYL4Q9UJ04 414 aa18.36■□□□□ 0.53
HLA-DMA-203ENST00000395305 TRIM35Q9UPQ4 493 aa18.36■□□□□ 0.53
HLA-DMA-203ENST00000395305 ANP32CO43423 234 aa18.35■□□□□ 0.53
HLA-DMA-203ENST00000395305 KDM3BQ7LBC6 1761 aa18.35■□□□□ 0.53
HLA-DMA-203ENST00000395305 NBPF26B4DH59 902 aa18.34■□□□□ 0.53
HLA-DMA-203ENST00000395305 SERPINB2P05120 415 aa18.34■□□□□ 0.53
HLA-DMA-203ENST00000395305 DPEP1P16444 411 aa18.34■□□□□ 0.53
HLA-DMA-203ENST00000395305 PIP4K2AP48426 406 aaPredicted RBP18.34■□□□□ 0.53
HLA-DMA-203ENST00000395305 NBPF10Q6P3W6 841 aaKnown RBP18.34■□□□□ 0.53
HLA-DMA-203ENST00000395305 DZIP3Q86Y13 1208 aaKnown RBP18.34■□□□□ 0.53
HLA-DMA-203ENST00000395305 NBPF15Q8N660 670 aa18.34■□□□□ 0.53
HLA-DMA-203ENST00000395305 CAMTA2O94983 1202 aa18.33■□□□□ 0.52
HLA-DMA-203ENST00000395305 CCDC184Q52MB2 194 aa18.33■□□□□ 0.52
HLA-DMA-203ENST00000395305 PXDNLA1KZ92 1463 aa18.33■□□□□ 0.52
HLA-DMA-203ENST00000395305 CHL1O00533 1208 aa18.32■□□□□ 0.52
HLA-DMA-203ENST00000395305 KCNA3P22001 575 aa18.32■□□□□ 0.52
HLA-DMA-203ENST00000395305 TBC1D9BQ66K14 1250 aa18.32■□□□□ 0.52
HLA-DMA-203ENST00000395305 CLEC4GQ6UXB4 293 aa18.32■□□□□ 0.52
HLA-DMA-203ENST00000395305 BICDL1Q6ZP65 573 aa18.32■□□□□ 0.52
HLA-DMA-203ENST00000395305 APAF1O14727 1248 aa18.31■□□□□ 0.52
HLA-DMA-203ENST00000395305 RGL2O15211 777 aa18.31■□□□□ 0.52
HLA-DMA-203ENST00000395305 SETDB2Q96T68 719 aa18.3■□□□□ 0.52
HLA-DMA-203ENST00000395305 PIM2Q9P1W9 311 aa18.3■□□□□ 0.52
HLA-DMA-203ENST00000395305 WWC3Q9ULE0 1092 aa18.3■□□□□ 0.52
HLA-DMA-203ENST00000395305 N4BP2Q86UW6 1770 aaPredicted RBP18.3■□□□□ 0.52
HLA-DMA-203ENST00000395305 ZNF652Q9Y2D9 606 aa18.29■□□□□ 0.52
HLA-DMA-203ENST00000395305 KIAA1551Q9HCM1 1747 aa18.29■□□□□ 0.52
HLA-DMA-203ENST00000395305 AFDNP55196 1824 aaKnown RBP18.28■□□□□ 0.52
HLA-DMA-203ENST00000395305 BCS1LQ9Y276 419 aa18.28■□□□□ 0.52
HLA-DMA-203ENST00000395305 LAS1LQ9Y4W2 734 aaKnown RBP18.28■□□□□ 0.52
HLA-DMA-203ENST00000395305 ERBB4Q15303 1308 aa18.27■□□□□ 0.52
HLA-DMA-203ENST00000395305 NRXN2Q9P2S2 1712 aa18.27■□□□□ 0.52
HLA-DMA-203ENST00000395305 CFAP44Q96MT7 982 aa18.27■□□□□ 0.52
HLA-DMA-203ENST00000395305 ERVV-1B6SEH8 477 aa18.26■□□□□ 0.51
HLA-DMA-203ENST00000395305 CHRNA5P30532 468 aa18.26■□□□□ 0.51
HLA-DMA-203ENST00000395305 ZNF784Q8NCA9 323 aaPredicted RBP18.26■□□□□ 0.51
HLA-DMA-203ENST00000395305 BRIP1Q9BX63 1249 aa18.26■□□□□ 0.51
HLA-DMA-203ENST00000395305 MRS2Q9HD23 443 aa18.26■□□□□ 0.51
HLA-DMA-203ENST00000395305 LAMB4A4D0S4 1761 aa18.26■□□□□ 0.51
HLA-DMA-203ENST00000395305 CARMIL3Q8ND23 1372 aa18.26■□□□□ 0.51
HLA-DMA-203ENST00000395305 SCN7AQ01118 1682 aa18.25■□□□□ 0.51
HLA-DMA-203ENST00000395305 MYL6BP14649 208 aa18.25■□□□□ 0.51
HLA-DMA-203ENST00000395305 EIF2S2P20042 333 aaKnown RBP18.25■□□□□ 0.51
HLA-DMA-203ENST00000395305 CALD1Q05682 793 aaKnown RBP18.25■□□□□ 0.51
HLA-DMA-203ENST00000395305 DALRD3Q5D0E6 543 aaKnown RBP18.25■□□□□ 0.51
HLA-DMA-203ENST00000395305 NGEFQ8N5V2 710 aa18.25■□□□□ 0.51
HLA-DMA-203ENST00000395305 PDZRN3Q9UPQ7 1066 aa18.25■□□□□ 0.51
HLA-DMA-203ENST00000395305 H0YIN7 160 aa18.24■□□□□ 0.51
HLA-DMA-203ENST00000395305 ZNF853P0CG23 659 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms