RNA–Protein interactions for RNA: ENST00000394546.6

TRPT1-202, Transcript of tRNA phosphotransferase 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene TRPT1, Length 1,058 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPT1-202ENST00000394546 A0A087WZG4 1122 aa24.77■■□□□ 1.56
TRPT1-202ENST00000394546 SNRPA1P09661 255 aaKnown RBP24.77■■□□□ 1.56
TRPT1-202ENST00000394546 CANXP27824 592 aaKnown RBP24.77■■□□□ 1.56
TRPT1-202ENST00000394546 RIPK4P57078 832 aa24.77■■□□□ 1.56
TRPT1-202ENST00000394546 GPR162Q16538 588 aa24.77■■□□□ 1.56
TRPT1-202ENST00000394546 ZBTB1Q9Y2K1 713 aa24.77■■□□□ 1.56
TRPT1-202ENST00000394546 PARP3Q9Y6F1 533 aa24.77■■□□□ 1.56
TRPT1-202ENST00000394546 USP42Q9H9J4 1324 aaKnown RBP24.77■■□□□ 1.56
TRPT1-202ENST00000394546 KCNQ3O43525 872 aa24.76■■□□□ 1.55
TRPT1-202ENST00000394546 RUNDC1Q96C34 613 aa24.76■■□□□ 1.55
TRPT1-202ENST00000394546 TMPOP42166 694 aaKnown RBP24.74■■□□□ 1.55
TRPT1-202ENST00000394546 NLGN2Q8NFZ4 835 aa24.74■■□□□ 1.55
TRPT1-202ENST00000394546 SRP68Q9UHB9 627 aaKnown RBP24.74■■□□□ 1.55
TRPT1-202ENST00000394546 NARFQ9UHQ1 456 aa24.74■■□□□ 1.55
TRPT1-202ENST00000394546 ADAMTS8Q9UP79 889 aa24.74■■□□□ 1.55
TRPT1-202ENST00000394546 COL15A1P39059 1388 aa24.74■■□□□ 1.55
TRPT1-202ENST00000394546 ANP32CO43423 234 aa24.72■■□□□ 1.55
TRPT1-202ENST00000394546 IL6STP40189 918 aaPredicted RBP24.72■■□□□ 1.55
TRPT1-202ENST00000394546 EIF5P55010 431 aaKnown RBP24.72■■□□□ 1.55
TRPT1-202ENST00000394546 FKBP8Q14318 412 aa24.71■■□□□ 1.55
TRPT1-202ENST00000394546 USPL1Q5W0Q7 1092 aa24.71■■□□□ 1.55
TRPT1-202ENST00000394546 CCDC146Q8IYE0 955 aa24.71■■□□□ 1.55
TRPT1-202ENST00000394546 PELP1Q8IZL8 1130 aaKnown RBP24.71■■□□□ 1.55
TRPT1-202ENST00000394546 BABAM1Q9NWV8 329 aa24.7■■□□□ 1.54
TRPT1-202ENST00000394546 MIS18AQ9NYP9 233 aa24.7■■□□□ 1.54
TRPT1-202ENST00000394546 A1BGP04217 495 aa24.69■■□□□ 1.54
TRPT1-202ENST00000394546 THUMPD2Q9BTF0 503 aaKnown RBP24.69■■□□□ 1.54
TRPT1-202ENST00000394546 USP16Q9Y5T5 823 aa24.69■■□□□ 1.54
TRPT1-202ENST00000394546 GRIN3BO60391 1043 aa24.68■■□□□ 1.54
TRPT1-202ENST00000394546 NEUROD2Q15784 382 aa24.68■■□□□ 1.54
TRPT1-202ENST00000394546 ZNF330Q9Y3S2 320 aaPredicted RBP24.68■■□□□ 1.54
TRPT1-202ENST00000394546 C4AP0C0L4 1744 aa24.67■■□□□ 1.54
TRPT1-202ENST00000394546 DLG5Q8TDM6 1919 aa24.67■■□□□ 1.54
TRPT1-202ENST00000394546 YY1P25490 414 aa24.66■■□□□ 1.54
TRPT1-202ENST00000394546 TGFB2P61812 414 aa24.66■■□□□ 1.54
TRPT1-202ENST00000394546 TSPYL4Q9UJ04 414 aa24.66■■□□□ 1.54
TRPT1-202ENST00000394546 TM4SF1P30408 202 aa24.65■■□□□ 1.54
TRPT1-202ENST00000394546 RRP7AQ9Y3A4 280 aaKnown RBP24.65■■□□□ 1.54
TRPT1-202ENST00000394546 EIF4A1P60842 406 aaKnown RBP24.64■■□□□ 1.54
TRPT1-202ENST00000394546 PRAMEF22A3QJZ6 481 aa24.62■■□□□ 1.53
TRPT1-202ENST00000394546 GIGYF1O75420 1035 aaPredicted RBP24.62■■□□□ 1.53
TRPT1-202ENST00000394546 POLRMTO00411 1230 aaKnown RBP24.61■■□□□ 1.53
TRPT1-202ENST00000394546 DDR1Q08345 913 aa24.61■■□□□ 1.53
TRPT1-202ENST00000394546 NFIXQ14938 502 aa24.61■■□□□ 1.53
TRPT1-202ENST00000394546 TBC1D2BQ9UPU7 963 aa24.61■■□□□ 1.53
TRPT1-202ENST00000394546 DZIP3Q86Y13 1208 aaKnown RBP24.6■■□□□ 1.53
TRPT1-202ENST00000394546 BCL2L12Q9HB09 334 aa24.6■■□□□ 1.53
TRPT1-202ENST00000394546 C10orf71Q711Q0 1435 aa24.6■■□□□ 1.53
TRPT1-202ENST00000394546 ZNF652Q9Y2D9 606 aa24.59■■□□□ 1.53
TRPT1-202ENST00000394546 CALD1Q05682 793 aaKnown RBP24.58■■□□□ 1.53
TRPT1-202ENST00000394546 TRIM35Q9UPQ4 493 aa24.58■■□□□ 1.53
TRPT1-202ENST00000394546 APAF1O14727 1248 aa24.57■■□□□ 1.52
TRPT1-202ENST00000394546 YBX3P16989 372 aaKnown RBP eCLIP24.57■■□□□ 1.522e-8■■□□□ 12.2
TRPT1-202ENST00000394546 CLEC4GQ6UXB4 293 aa24.57■■□□□ 1.52
TRPT1-202ENST00000394546 MRS2Q9HD23 443 aa24.57■■□□□ 1.52
TRPT1-202ENST00000394546 KDM3BQ7LBC6 1761 aa24.57■■□□□ 1.52
TRPT1-202ENST00000394546 RGL2O15211 777 aa24.56■■□□□ 1.52
TRPT1-202ENST00000394546 CAMTA2O94983 1202 aa24.56■■□□□ 1.52
TRPT1-202ENST00000394546 SERPINB2P05120 415 aa24.56■■□□□ 1.52
TRPT1-202ENST00000394546 BICDL1Q6ZP65 573 aa24.56■■□□□ 1.52
TRPT1-202ENST00000394546 SETDB2Q96T68 719 aa24.56■■□□□ 1.52
TRPT1-202ENST00000394546 LAS1LQ9Y4W2 734 aaKnown RBP24.56■■□□□ 1.52
TRPT1-202ENST00000394546 A0A0G2JLW4 131 aa24.55■■□□□ 1.52
TRPT1-202ENST00000394546 CHL1O00533 1208 aa24.55■■□□□ 1.52
TRPT1-202ENST00000394546 PIP4K2AP48426 406 aaPredicted RBP24.55■■□□□ 1.52
TRPT1-202ENST00000394546 ERBB4Q15303 1308 aa24.55■■□□□ 1.52
TRPT1-202ENST00000394546 NBPF26B4DH59 902 aa24.54■■□□□ 1.52
TRPT1-202ENST00000394546 DPEP1P16444 411 aa24.54■■□□□ 1.52
TRPT1-202ENST00000394546 TBC1D9BQ66K14 1250 aa24.54■■□□□ 1.52
TRPT1-202ENST00000394546 NBPF10Q6P3W6 841 aaKnown RBP24.54■■□□□ 1.52
TRPT1-202ENST00000394546 NBPF15Q8N660 670 aa24.54■■□□□ 1.52
TRPT1-202ENST00000394546 PXDNLA1KZ92 1463 aa24.53■■□□□ 1.52
TRPT1-202ENST00000394546 KIF13BQ9NQT8 1826 aa24.53■■□□□ 1.52
TRPT1-202ENST00000394546 CARMIL3Q8ND23 1372 aa24.53■■□□□ 1.52
TRPT1-202ENST00000394546 NPHP1O15259 732 aa24.52■■□□□ 1.52
TRPT1-202ENST00000394546 CCDC184Q52MB2 194 aa24.52■■□□□ 1.52
TRPT1-202ENST00000394546 CFAP44Q96MT7 982 aa24.52■■□□□ 1.52
TRPT1-202ENST00000394546 PIM2Q9P1W9 311 aa24.52■■□□□ 1.52
TRPT1-202ENST00000394546 KIF6Q6ZMV9 814 aa24.5■■□□□ 1.51
TRPT1-202ENST00000394546 PDZRN3Q9UPQ7 1066 aa24.5■■□□□ 1.51
TRPT1-202ENST00000394546 BCS1LQ9Y276 419 aa24.5■■□□□ 1.51
TRPT1-202ENST00000394546 EIF2S2P20042 333 aaKnown RBP24.49■■□□□ 1.51
TRPT1-202ENST00000394546 WWC3Q9ULE0 1092 aa24.49■■□□□ 1.51
TRPT1-202ENST00000394546 LAMB4A4D0S4 1761 aa24.49■■□□□ 1.51
TRPT1-202ENST00000394546 ERVV-1B6SEH8 477 aa24.48■■□□□ 1.51
TRPT1-202ENST00000394546 MYL6BP14649 208 aa24.48■■□□□ 1.51
TRPT1-202ENST00000394546 GNAI1P63096 354 aa24.48■■□□□ 1.51
TRPT1-202ENST00000394546 SCN7AQ01118 1682 aa24.48■■□□□ 1.51
TRPT1-202ENST00000394546 DALRD3Q5D0E6 543 aaKnown RBP24.48■■□□□ 1.51
TRPT1-202ENST00000394546 NGEFQ8N5V2 710 aa24.48■■□□□ 1.51
TRPT1-202ENST00000394546 CHD4Q14839 1912 aa24.47■■□□□ 1.51
TRPT1-202ENST00000394546 UTRNP46939 3433 aa24.47■■□□□ 1.51
TRPT1-202ENST00000394546 HOXB7P09629 217 aa24.47■■□□□ 1.51
TRPT1-202ENST00000394546 ST5P78524 1137 aa24.47■■□□□ 1.51
TRPT1-202ENST00000394546 CNBD1Q8NA66 436 aa24.47■■□□□ 1.51
TRPT1-202ENST00000394546 IFT57Q9NWB7 429 aa24.47■■□□□ 1.51
TRPT1-202ENST00000394546 PDE6BP35913 854 aa24.46■■□□□ 1.51
TRPT1-202ENST00000394546 BRIP1Q9BX63 1249 aa24.46■■□□□ 1.51
TRPT1-202ENST00000394546 H0YIN7 160 aa24.45■■□□□ 1.5
TRPT1-202ENST00000394546 KCNA3P22001 575 aa24.45■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms