RNA–Protein interactions for RNA: ENST00000393091.6

USP44-202, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 3,161 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-202ENST00000393091 ALDH1L2Q3SY69 923 aa17.2■□□□□ 0.34
USP44-202ENST00000393091 LRRC4BQ9NT99 713 aa17.19■□□□□ 0.34
USP44-202ENST00000393091 KAT6BQ8WYB5 2073 aa17.19■□□□□ 0.34
USP44-202ENST00000393091 NUP98P52948 1817 aa17.19■□□□□ 0.34
USP44-202ENST00000393091 INTS5Q6P9B9 1019 aaKnown RBP17.18■□□□□ 0.34
USP44-202ENST00000393091 C8orf58Q8NAV2 365 aa17.18■□□□□ 0.34
USP44-202ENST00000393091 CDCA7LQ96GN5 454 aa17.18■□□□□ 0.34
USP44-202ENST00000393091 SYTL4Q96C24 671 aaPredicted RBP17.18■□□□□ 0.34
USP44-202ENST00000393091 SF3B2Q13435 895 aaKnown RBP17.17■□□□□ 0.34
USP44-202ENST00000393091 PDIA6Q15084 440 aa17.17■□□□□ 0.34
USP44-202ENST00000393091 LINC00116Q8NCU8 138 aa17.17■□□□□ 0.34
USP44-202ENST00000393091 MIS18AQ9NYP9 233 aa17.17■□□□□ 0.34
USP44-202ENST00000393091 ADRA2BP18089 450 aa17.17■□□□□ 0.34
USP44-202ENST00000393091 CCNL1Q9UK58 526 aaPredicted RBP17.17■□□□□ 0.34
USP44-202ENST00000393091 PXDNLA1KZ92 1463 aa17.17■□□□□ 0.34
USP44-202ENST00000393091 TSR2Q969E8 191 aaKnown RBP17.16■□□□□ 0.34
USP44-202ENST00000393091 LAMB2P55268 1798 aa17.16■□□□□ 0.34
USP44-202ENST00000393091 STARD3NLO95772 234 aa17.16■□□□□ 0.34
USP44-202ENST00000393091 ATP6V1AP38606 617 aa17.15■□□□□ 0.34
USP44-202ENST00000393091 EXOSC9Q06265 439 aaKnown RBP17.15■□□□□ 0.34
USP44-202ENST00000393091 IL6STP40189 918 aaPredicted RBP17.15■□□□□ 0.34
USP44-202ENST00000393091 TWISTNBQ3B726 338 aaPredicted RBP17.15■□□□□ 0.34
USP44-202ENST00000393091 KIF13BQ9NQT8 1826 aa17.14■□□□□ 0.33
USP44-202ENST00000393091 DDX21Q9NR30 783 aaKnown RBP eCLIP17.14■□□□□ 0.33
USP44-202ENST00000393091 CCDC87Q9NVE4 849 aa17.14■□□□□ 0.33
USP44-202ENST00000393091 RPS6KA4O75676 772 aa17.13■□□□□ 0.33
USP44-202ENST00000393091 SSFA2P28290 1259 aa17.13■□□□□ 0.33
USP44-202ENST00000393091 EZH2Q15910 746 aaKnown RBP17.13■□□□□ 0.33
USP44-202ENST00000393091 CCDC30Q5VVM6 783 aa17.13■□□□□ 0.33
USP44-202ENST00000393091 DNAJC10Q8IXB1 793 aa17.13■□□□□ 0.33
USP44-202ENST00000393091 TSPYL6Q8N831 410 aa17.13■□□□□ 0.33
USP44-202ENST00000393091 EIF5P55010 431 aaKnown RBP17.13■□□□□ 0.33
USP44-202ENST00000393091 SOCS7O14512 581 aa17.12■□□□□ 0.33
USP44-202ENST00000393091 USP16Q9Y5T5 823 aa17.12■□□□□ 0.33
USP44-202ENST00000393091 CRKLP46109 303 aaKnown RBP17.12■□□□□ 0.33
USP44-202ENST00000393091 FLAD1Q8NFF5 587 aa17.12■□□□□ 0.33
USP44-202ENST00000393091 EN1Q05925 392 aaPredicted RBP17.12■□□□□ 0.33
USP44-202ENST00000393091 DBF4Q9UBU7 674 aaPredicted RBP17.12■□□□□ 0.33
USP44-202ENST00000393091 NBPF26B4DH59 902 aa17.11■□□□□ 0.33
USP44-202ENST00000393091 NBPF14Q5TI25 921 aa17.11■□□□□ 0.33
USP44-202ENST00000393091 NBPF10Q6P3W6 841 aaKnown RBP17.11■□□□□ 0.33
USP44-202ENST00000393091 NBPF15Q8N660 670 aa17.11■□□□□ 0.33
USP44-202ENST00000393091 RBM42Q9BTD8 480 aaKnown RBP17.11■□□□□ 0.33
USP44-202ENST00000393091 HYPKQ9NX55 129 aa17.11■□□□□ 0.33
USP44-202ENST00000393091 LAS1LQ9Y4W2 734 aaKnown RBP17.11■□□□□ 0.33
USP44-202ENST00000393091 PTCD1O75127 700 aaKnown RBP17.1■□□□□ 0.33
USP44-202ENST00000393091 SALL2Q9Y467 1007 aaPredicted RBP17.1■□□□□ 0.33
USP44-202ENST00000393091 A0A087WZG4 1122 aa17.1■□□□□ 0.33
USP44-202ENST00000393091 PRAMEF22A3QJZ6 481 aa17.1■□□□□ 0.33
USP44-202ENST00000393091 AFDNP55196 1824 aaKnown RBP17.1■□□□□ 0.33
USP44-202ENST00000393091 ARHGAP45Q92619 1136 aa17.1■□□□□ 0.33
USP44-202ENST00000393091 ATP10DQ9P241 1426 aa17.09■□□□□ 0.33
USP44-202ENST00000393091 RNF123Q5XPI4 1314 aa17.09■□□□□ 0.33
USP44-202ENST00000393091 KRT24Q2M2I5 525 aa17.09■□□□□ 0.33
USP44-202ENST00000393091 COL15A1P39059 1388 aa17.09■□□□□ 0.33
USP44-202ENST00000393091 RARSP54136 660 aaKnown RBP17.09■□□□□ 0.33
USP44-202ENST00000393091 MRPL50Q8N5N7 158 aaKnown RBP17.09■□□□□ 0.33
USP44-202ENST00000393091 LRP5O75197 1615 aa17.08■□□□□ 0.33
USP44-202ENST00000393091 ERVV-1B6SEH8 477 aa17.08■□□□□ 0.32
USP44-202ENST00000393091 PTPRCP08575 1304 aa17.08■□□□□ 0.32
USP44-202ENST00000393091 SLC15A2Q16348 729 aa17.08■□□□□ 0.32
USP44-202ENST00000393091 HDGFL1Q5TGJ6 251 aa17.08■□□□□ 0.32
USP44-202ENST00000393091 ZNF827Q17R98 1081 aa17.07■□□□□ 0.32
USP44-202ENST00000393091 DEFB132Q7Z7B7 95 aa17.06■□□□□ 0.32
USP44-202ENST00000393091 RIC1Q4ADV7 1423 aa17.06■□□□□ 0.32
USP44-202ENST00000393091 DLEC1Q9Y238 1755 aa17.05■□□□□ 0.32
USP44-202ENST00000393091 PNPLA7Q6ZV29 1317 aa17.05■□□□□ 0.32
USP44-202ENST00000393091 ZBTB1Q9Y2K1 713 aa17.05■□□□□ 0.32
USP44-202ENST00000393091 CLEC4GQ6UXB4 293 aa17.04■□□□□ 0.32
USP44-202ENST00000393091 ANO8Q9HCE9 1232 aaPredicted RBP17.04■□□□□ 0.32
USP44-202ENST00000393091 CHPF2Q9P2E5 772 aa17.04■□□□□ 0.32
USP44-202ENST00000393091 KIAA1551Q9HCM1 1747 aa17.04■□□□□ 0.32
USP44-202ENST00000393091 A1BGP04217 495 aa17.03■□□□□ 0.32
USP44-202ENST00000393091 SLC16A10Q8TF71 515 aa17.03■□□□□ 0.32
USP44-202ENST00000393091 NARFQ9UHQ1 456 aa17.03■□□□□ 0.32
USP44-202ENST00000393091 DDX60Q8IY21 1712 aaKnown RBP17.03■□□□□ 0.32
USP44-202ENST00000393091 STK32BQ9NY57 414 aa17.03■□□□□ 0.32
USP44-202ENST00000393091 RTCBQ9Y3I0 505 aaKnown RBP17.03■□□□□ 0.32
USP44-202ENST00000393091 KIF16BQ96L93 1317 aa17.03■□□□□ 0.32
USP44-202ENST00000393091 USP42Q9H9J4 1324 aaKnown RBP17.03■□□□□ 0.32
USP44-202ENST00000393091 SSH1Q8WYL5 1049 aa17.03■□□□□ 0.32
USP44-202ENST00000393091 AK7Q96M32 723 aa17.03■□□□□ 0.32
USP44-202ENST00000393091 CAMTA2O94983 1202 aa17.02■□□□□ 0.31
USP44-202ENST00000393091 STK31Q9BXU1 1019 aa17.02■□□□□ 0.31
USP44-202ENST00000393091 MAP3K15Q6ZN16 1313 aa17.02■□□□□ 0.31
USP44-202ENST00000393091 ADCY9O60503 1353 aa17.02■□□□□ 0.31
USP44-202ENST00000393091 PLBD2Q8NHP8 589 aa17.01■□□□□ 0.31
USP44-202ENST00000393091 SENP3-EIF4A1A0A087X0R7 540 aa17.01■□□□□ 0.31
USP44-202ENST00000393091 TRIM28Q13263 835 aaKnown RBP17.01■□□□□ 0.31
USP44-202ENST00000393091 PROSER3Q2NL68 480 aa17.01■□□□□ 0.31
USP44-202ENST00000393091 AMIGO3Q86WK7 504 aa17.01■□□□□ 0.31
USP44-202ENST00000393091 MYH3P11055 1940 aa17■□□□□ 0.31
USP44-202ENST00000393091 ARHGEF1Q92888 912 aaKnown RBP16.99■□□□□ 0.31
USP44-202ENST00000393091 ABCC4O15439 1325 aa16.99■□□□□ 0.31
USP44-202ENST00000393091 GNPATO15228 680 aa16.99■□□□□ 0.31
USP44-202ENST00000393091 TRAPPC3LQ5T215 181 aa16.99■□□□□ 0.31
USP44-202ENST00000393091 RCAN3Q9UKA8 241 aa16.99■□□□□ 0.31
USP44-202ENST00000393091 SLC4A2P04920 1241 aa16.98■□□□□ 0.31
USP44-202ENST00000393091 FLIIQ13045 1269 aa16.98■□□□□ 0.31
USP44-202ENST00000393091 KSR2Q6VAB6 950 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms