RNA–Protein interactions for RNA: ENST00000392246.6

SUMO1-203, Transcript of small ubiquitin-like modifier 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUMO1, Length 1,536 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO1-203ENST00000392246 CRKLP46109 303 aaKnown RBP19.33■□□□□ 0.68
SUMO1-203ENST00000392246 ZNF827Q17R98 1081 aa19.33■□□□□ 0.68
SUMO1-203ENST00000392246 HOXB7P09629 217 aa19.32■□□□□ 0.68
SUMO1-203ENST00000392246 SLFN5Q08AF3 891 aa19.32■□□□□ 0.68
SUMO1-203ENST00000392246 KRT24Q2M2I5 525 aa19.32■□□□□ 0.68
SUMO1-203ENST00000392246 TFCP2L1Q9NZI6 479 aa19.32■□□□□ 0.68
SUMO1-203ENST00000392246 LAMB4A4D0S4 1761 aa19.32■□□□□ 0.68
SUMO1-203ENST00000392246 DUSP27Q5VZP5 1158 aa19.31■□□□□ 0.68
SUMO1-203ENST00000392246 INTS5Q6P9B9 1019 aaKnown RBP19.31■□□□□ 0.68
SUMO1-203ENST00000392246 CDCA7LQ96GN5 454 aa19.31■□□□□ 0.68
SUMO1-203ENST00000392246 CCDC87Q9NVE4 849 aa19.31■□□□□ 0.68
SUMO1-203ENST00000392246 GNPATO15228 680 aa19.3■□□□□ 0.68
SUMO1-203ENST00000392246 C8orf58Q8NAV2 365 aa19.3■□□□□ 0.68
SUMO1-203ENST00000392246 RTCBQ9Y3I0 505 aaKnown RBP19.3■□□□□ 0.68
SUMO1-203ENST00000392246 UBR3Q6ZT12 1888 aa19.3■□□□□ 0.68
SUMO1-203ENST00000392246 SOS1Q07889 1333 aaPredicted RBP19.29■□□□□ 0.68
SUMO1-203ENST00000392246 ELL2O00472 640 aaPredicted RBP19.29■□□□□ 0.68
SUMO1-203ENST00000392246 RPS6KA4O75676 772 aa19.29■□□□□ 0.68
SUMO1-203ENST00000392246 A1BGP04217 495 aa19.29■□□□□ 0.68
SUMO1-203ENST00000392246 EIF2S2P20042 333 aaKnown RBP19.29■□□□□ 0.68
SUMO1-203ENST00000392246 QSER1Q2KHR3 1735 aa19.29■□□□□ 0.68
SUMO1-203ENST00000392246 TUBGCP6Q96RT7 1819 aa19.28■□□□□ 0.68
SUMO1-203ENST00000392246 EXOSC9Q06265 439 aaKnown RBP19.28■□□□□ 0.68
SUMO1-203ENST00000392246 R3HDM1Q15032 1099 aaKnown RBP19.28■□□□□ 0.68
SUMO1-203ENST00000392246 TRMT2AQ8IZ69 625 aaKnown RBP19.28■□□□□ 0.68
SUMO1-203ENST00000392246 FLAD1Q8NFF5 587 aa19.28■□□□□ 0.68
SUMO1-203ENST00000392246 ZBTB1Q9Y2K1 713 aa19.28■□□□□ 0.68
SUMO1-203ENST00000392246 CANXP27824 592 aaKnown RBP19.27■□□□□ 0.68
SUMO1-203ENST00000392246 SSFA2P28290 1259 aa19.27■□□□□ 0.68
SUMO1-203ENST00000392246 TWISTNBQ3B726 338 aaPredicted RBP19.27■□□□□ 0.68
SUMO1-203ENST00000392246 TSPYL6Q8N831 410 aa19.27■□□□□ 0.68
SUMO1-203ENST00000392246 CHMP4AQ9BY43 222 aa19.27■□□□□ 0.68
SUMO1-203ENST00000392246 HDGFL1Q5TGJ6 251 aa19.26■□□□□ 0.67
SUMO1-203ENST00000392246 ERBB4Q15303 1308 aa19.26■□□□□ 0.67
SUMO1-203ENST00000392246 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.25■□□□□ 0.67
SUMO1-203ENST00000392246 ADRA2BP18089 450 aa19.25■□□□□ 0.67
SUMO1-203ENST00000392246 IL6STP40189 918 aaPredicted RBP19.25■□□□□ 0.67
SUMO1-203ENST00000392246 TRAPPC3LQ5T215 181 aa19.25■□□□□ 0.67
SUMO1-203ENST00000392246 PNPLA7Q6ZV29 1317 aa19.25■□□□□ 0.67
SUMO1-203ENST00000392246 PSDA5PKW4 1024 aaPredicted RBP19.25■□□□□ 0.67
SUMO1-203ENST00000392246 PHF14O94880 888 aa19.25■□□□□ 0.67
SUMO1-203ENST00000392246 AMIGO3Q86WK7 504 aa19.25■□□□□ 0.67
SUMO1-203ENST00000392246 NECTIN2Q92692 538 aa19.25■□□□□ 0.67
SUMO1-203ENST00000392246 NBPF26B4DH59 902 aa19.24■□□□□ 0.67
SUMO1-203ENST00000392246 EIF5P55010 431 aaKnown RBP19.24■□□□□ 0.67
SUMO1-203ENST00000392246 NBPF10Q6P3W6 841 aaKnown RBP19.24■□□□□ 0.67
SUMO1-203ENST00000392246 NPM2Q86SE8 214 aaKnown RBP19.24■□□□□ 0.67
SUMO1-203ENST00000392246 NBPF15Q8N660 670 aa19.24■□□□□ 0.67
SUMO1-203ENST00000392246 VAMP4O75379 141 aa19.23■□□□□ 0.67
SUMO1-203ENST00000392246 PIP4K2AP48426 406 aaPredicted RBP19.23■□□□□ 0.67
SUMO1-203ENST00000392246 CCDC30Q5VVM6 783 aa19.23■□□□□ 0.67
SUMO1-203ENST00000392246 SMIM5Q71RC9 77 aa19.23■□□□□ 0.67
SUMO1-203ENST00000392246 COL23A1Q86Y22 540 aaPredicted RBP19.23■□□□□ 0.67
SUMO1-203ENST00000392246 YTHDC1Q96MU7 727 aaKnown RBP19.23■□□□□ 0.67
SUMO1-203ENST00000392246 ARHGEF1Q92888 912 aaKnown RBP19.22■□□□□ 0.67
SUMO1-203ENST00000392246 ZNF330Q9Y3S2 320 aaPredicted RBP19.22■□□□□ 0.67
SUMO1-203ENST00000392246 COL15A1P39059 1388 aa19.22■□□□□ 0.67
SUMO1-203ENST00000392246 A0A087WZG4 1122 aa19.21■□□□□ 0.67
SUMO1-203ENST00000392246 MSH5O43196 834 aa19.21■□□□□ 0.67
SUMO1-203ENST00000392246 MYL6BP14649 208 aa19.21■□□□□ 0.67
SUMO1-203ENST00000392246 RFC4P35249 363 aa19.21■□□□□ 0.67
SUMO1-203ENST00000392246 PDIA6Q15084 440 aa19.21■□□□□ 0.67
SUMO1-203ENST00000392246 POTEDQ86YR6 584 aa19.21■□□□□ 0.67
SUMO1-203ENST00000392246 DDX21Q9NR30 783 aaKnown RBP eCLIP19.21■□□□□ 0.67
SUMO1-203ENST00000392246 DBF4Q9UBU7 674 aaPredicted RBP19.21■□□□□ 0.67
SUMO1-203ENST00000392246 CHPF2Q9P2E5 772 aa19.2■□□□□ 0.66
SUMO1-203ENST00000392246 PDGFDQ9GZP0 370 aaPredicted RBP19.2■□□□□ 0.66
SUMO1-203ENST00000392246 CACNA1FO60840 1977 aa19.19■□□□□ 0.66
SUMO1-203ENST00000392246 C4AP0C0L4 1744 aa19.19■□□□□ 0.66
SUMO1-203ENST00000392246 PROSER3Q2NL68 480 aa19.19■□□□□ 0.66
SUMO1-203ENST00000392246 CASZ1Q86V15 1759 aa19.19■□□□□ 0.66
SUMO1-203ENST00000392246 SLC16A10Q8TF71 515 aa19.19■□□□□ 0.66
SUMO1-203ENST00000392246 STK31Q9BXU1 1019 aa19.19■□□□□ 0.66
SUMO1-203ENST00000392246 ZPR1O75312 459 aa19.18■□□□□ 0.66
SUMO1-203ENST00000392246 ANXA1P04083 346 aa19.18■□□□□ 0.66
SUMO1-203ENST00000392246 CT47B1P0C2W7 299 aaPredicted RBP19.18■□□□□ 0.66
SUMO1-203ENST00000392246 ARXQ96QS3 562 aa19.18■□□□□ 0.66
SUMO1-203ENST00000392246 HYPKQ9NX55 129 aa19.18■□□□□ 0.66
SUMO1-203ENST00000392246 LRP10Q7Z4F1 713 aa19.17■□□□□ 0.66
SUMO1-203ENST00000392246 ZNF428Q96B54 188 aa19.17■□□□□ 0.66
SUMO1-203ENST00000392246 NARFQ9UHQ1 456 aa19.17■□□□□ 0.66
SUMO1-203ENST00000392246 USP42Q9H9J4 1324 aaKnown RBP19.16■□□□□ 0.66
SUMO1-203ENST00000392246 DZIP3Q86Y13 1208 aaKnown RBP19.16■□□□□ 0.66
SUMO1-203ENST00000392246 TBC1D2BQ9UPU7 963 aa19.16■□□□□ 0.66
SUMO1-203ENST00000392246 TCERG1O14776 1098 aaKnown RBP19.15■□□□□ 0.66
SUMO1-203ENST00000392246 SLC4A2P04920 1241 aa19.15■□□□□ 0.66
SUMO1-203ENST00000392246 COPS6Q7L5N1 327 aa19.15■□□□□ 0.66
SUMO1-203ENST00000392246 SRP68Q9UHB9 627 aaKnown RBP19.15■□□□□ 0.66
SUMO1-203ENST00000392246 USPL1Q5W0Q7 1092 aa19.14■□□□□ 0.65
SUMO1-203ENST00000392246 KIF6Q6ZMV9 814 aa19.14■□□□□ 0.65
SUMO1-203ENST00000392246 XAGE3Q8WTP9 111 aa19.14■□□□□ 0.65
SUMO1-203ENST00000392246 MTFR1LQ9H019 292 aa19.14■□□□□ 0.65
SUMO1-203ENST00000392246 CAMTA2O94983 1202 aa19.13■□□□□ 0.65
SUMO1-203ENST00000392246 ZBTB7AO95365 584 aa19.13■□□□□ 0.65
SUMO1-203ENST00000392246 GYS1P13807 737 aa19.13■□□□□ 0.65
SUMO1-203ENST00000392246 AIMP1Q12904 312 aaKnown RBP19.13■□□□□ 0.65
SUMO1-203ENST00000392246 TTLL7Q6ZT98 887 aa19.13■□□□□ 0.65
SUMO1-203ENST00000392246 NLGN1Q8N2Q7 840 aa19.12■□□□□ 0.65
SUMO1-203ENST00000392246 MAP3K15Q6ZN16 1313 aa19.12■□□□□ 0.65
SUMO1-203ENST00000392246 ERVV-1B6SEH8 477 aa19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 134.3 ms