RNA–Protein interactions for RNA: ENST00000392090.6

PDCD2-202, Transcript of programmed cell death 2, humanhuman

TSL 1 (best) BASIC

Gene PDCD2, Length 936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD2-202ENST00000392090 SOS1Q07889 1333 aaPredicted RBP25.9■■□□□ 1.74
PDCD2-202ENST00000392090 ZPR1O75312 459 aa25.9■■□□□ 1.74
PDCD2-202ENST00000392090 PRKRIP1Q9H875 184 aaPredicted RBP25.9■■□□□ 1.74
PDCD2-202ENST00000392090 USP42Q9H9J4 1324 aaKnown RBP25.89■■□□□ 1.74
PDCD2-202ENST00000392090 KCNQ3O43525 872 aa25.89■■□□□ 1.74
PDCD2-202ENST00000392090 CANXP27824 592 aaKnown RBP25.89■■□□□ 1.74
PDCD2-202ENST00000392090 PARP3Q9Y6F1 533 aa25.88■■□□□ 1.73
PDCD2-202ENST00000392090 DLG5Q8TDM6 1919 aa25.88■■□□□ 1.73
PDCD2-202ENST00000392090 WDR43Q15061 677 aaKnown RBP eCLIP25.87■■□□□ 1.73
PDCD2-202ENST00000392090 TAF7Q15545 349 aaPredicted RBP25.87■■□□□ 1.73
PDCD2-202ENST00000392090 COL15A1P39059 1388 aa25.86■■□□□ 1.73
PDCD2-202ENST00000392090 FKBP8Q14318 412 aa25.86■■□□□ 1.73
PDCD2-202ENST00000392090 USPL1Q5W0Q7 1092 aa25.84■■□□□ 1.73
PDCD2-202ENST00000392090 NPM2Q86SE8 214 aaKnown RBP25.83■■□□□ 1.73
PDCD2-202ENST00000392090 NARFQ9UHQ1 456 aa25.83■■□□□ 1.73
PDCD2-202ENST00000392090 ZNF330Q9Y3S2 320 aaPredicted RBP25.83■■□□□ 1.73
PDCD2-202ENST00000392090 A0A087WZG4 1122 aa25.82■■□□□ 1.72
PDCD2-202ENST00000392090 ZNF316A6NFI3 1004 aaPredicted RBP25.82■■□□□ 1.72
PDCD2-202ENST00000392090 SNRPA1P09661 255 aaKnown RBP25.82■■□□□ 1.72
PDCD2-202ENST00000392090 PNISRQ8TF01 805 aaKnown RBP25.82■■□□□ 1.72
PDCD2-202ENST00000392090 MIS18AQ9NYP9 233 aa25.82■■□□□ 1.72
PDCD2-202ENST00000392090 A1BGP04217 495 aa25.81■■□□□ 1.72
PDCD2-202ENST00000392090 EIF5P55010 431 aaKnown RBP25.81■■□□□ 1.72
PDCD2-202ENST00000392090 RIPK4P57078 832 aa25.81■■□□□ 1.72
PDCD2-202ENST00000392090 THUMPD2Q9BTF0 503 aaKnown RBP25.81■■□□□ 1.72
PDCD2-202ENST00000392090 GRIN3BO60391 1043 aa25.8■■□□□ 1.72
PDCD2-202ENST00000392090 YBX3P16989 372 aaKnown RBP eCLIP25.8■■□□□ 1.725e-10■■□□□ 12.2
PDCD2-202ENST00000392090 CCDC146Q8IYE0 955 aa25.8■■□□□ 1.72
PDCD2-202ENST00000392090 CHD4Q14839 1912 aa25.79■■□□□ 1.72
PDCD2-202ENST00000392090 IL6STP40189 918 aaPredicted RBP25.79■■□□□ 1.72
PDCD2-202ENST00000392090 USP16Q9Y5T5 823 aa25.79■■□□□ 1.72
PDCD2-202ENST00000392090 TMPOP42166 694 aaKnown RBP25.78■■□□□ 1.72
PDCD2-202ENST00000392090 WWC3Q9ULE0 1092 aa25.78■■□□□ 1.72
PDCD2-202ENST00000392090 PRAMEF22A3QJZ6 481 aa25.77■■□□□ 1.72
PDCD2-202ENST00000392090 DDR1Q08345 913 aa25.77■■□□□ 1.72
PDCD2-202ENST00000392090 LMOD3Q0VAK6 560 aa25.77■■□□□ 1.72
PDCD2-202ENST00000392090 TM4SF1P30408 202 aa25.76■■□□□ 1.71
PDCD2-202ENST00000392090 TGFB2P61812 414 aa25.76■■□□□ 1.71
PDCD2-202ENST00000392090 RUNDC1Q96C34 613 aa25.76■■□□□ 1.71
PDCD2-202ENST00000392090 ADAMTS8Q9UP79 889 aa25.76■■□□□ 1.71
PDCD2-202ENST00000392090 C10orf71Q711Q0 1435 aa25.76■■□□□ 1.71
PDCD2-202ENST00000392090 KIF13BQ9NQT8 1826 aa25.75■■□□□ 1.71
PDCD2-202ENST00000392090 NEUROD2Q15784 382 aa25.75■■□□□ 1.71
PDCD2-202ENST00000392090 TBC1D2BQ9UPU7 963 aa25.75■■□□□ 1.71
PDCD2-202ENST00000392090 RRP7AQ9Y3A4 280 aaKnown RBP25.75■■□□□ 1.71
PDCD2-202ENST00000392090 POLRMTO00411 1230 aaKnown RBP25.74■■□□□ 1.71
PDCD2-202ENST00000392090 NFIXQ14938 502 aa25.74■■□□□ 1.71
PDCD2-202ENST00000392090 BCL2L12Q9HB09 334 aa25.74■■□□□ 1.71
PDCD2-202ENST00000392090 A0A0G2JLW4 131 aa25.73■■□□□ 1.71
PDCD2-202ENST00000392090 PIP4K2AP48426 406 aaPredicted RBP25.73■■□□□ 1.71
PDCD2-202ENST00000392090 TSPYL4Q9UJ04 414 aa25.72■■□□□ 1.71
PDCD2-202ENST00000392090 PXDNLA1KZ92 1463 aa25.72■■□□□ 1.71
PDCD2-202ENST00000392090 KDM3BQ7LBC6 1761 aa25.72■■□□□ 1.71
PDCD2-202ENST00000392090 BICDL1Q6ZP65 573 aa25.71■■□□□ 1.71
PDCD2-202ENST00000392090 N4BP2Q86UW6 1770 aaPredicted RBP25.7■■□□□ 1.7
PDCD2-202ENST00000392090 DPEP1P16444 411 aa25.7■■□□□ 1.7
PDCD2-202ENST00000392090 EIF4A1P60842 406 aaKnown RBP25.7■■□□□ 1.7
PDCD2-202ENST00000392090 DZIP3Q86Y13 1208 aaKnown RBP25.69■■□□□ 1.7
PDCD2-202ENST00000392090 GIGYF1O75420 1035 aaPredicted RBP25.68■■□□□ 1.7
PDCD2-202ENST00000392090 SERPINB2P05120 415 aa25.68■■□□□ 1.7
PDCD2-202ENST00000392090 TBC1D9BQ66K14 1250 aa25.67■■□□□ 1.7
PDCD2-202ENST00000392090 BCS1LQ9Y276 419 aa25.67■■□□□ 1.7
PDCD2-202ENST00000392090 CAMTA2O94983 1202 aa25.66■■□□□ 1.7
PDCD2-202ENST00000392090 BABAM1Q9NWV8 329 aa25.66■■□□□ 1.7
PDCD2-202ENST00000392090 KIAA1551Q9HCM1 1747 aa25.66■■□□□ 1.7
PDCD2-202ENST00000392090 SCN7AQ01118 1682 aa25.65■■□□□ 1.7
PDCD2-202ENST00000392090 NBPF26B4DH59 902 aa25.65■■□□□ 1.7
PDCD2-202ENST00000392090 ANP32CO43423 234 aa25.65■■□□□ 1.7
PDCD2-202ENST00000392090 NBPF10Q6P3W6 841 aaKnown RBP25.65■■□□□ 1.7
PDCD2-202ENST00000392090 NBPF15Q8N660 670 aa25.65■■□□□ 1.7
PDCD2-202ENST00000392090 AFDNP55196 1824 aaKnown RBP25.65■■□□□ 1.7
PDCD2-202ENST00000392090 LAMB4A4D0S4 1761 aa25.64■■□□□ 1.7
PDCD2-202ENST00000392090 SETDB2Q96T68 719 aa25.64■■□□□ 1.7
PDCD2-202ENST00000392090 ZNF784Q8NCA9 323 aaPredicted RBP25.63■■□□□ 1.69
PDCD2-202ENST00000392090 PIM2Q9P1W9 311 aa25.63■■□□□ 1.69
PDCD2-202ENST00000392090 TRIM35Q9UPQ4 493 aa25.63■■□□□ 1.69
PDCD2-202ENST00000392090 ZNF652Q9Y2D9 606 aa25.63■■□□□ 1.69
PDCD2-202ENST00000392090 LAS1LQ9Y4W2 734 aaKnown RBP25.63■■□□□ 1.69
PDCD2-202ENST00000392090 CARMIL3Q8ND23 1372 aa25.61■■□□□ 1.69
PDCD2-202ENST00000392090 NPHP1O15259 732 aa25.61■■□□□ 1.69
PDCD2-202ENST00000392090 KCNA3P22001 575 aa25.61■■□□□ 1.69
PDCD2-202ENST00000392090 CHRNA5P30532 468 aa25.61■■□□□ 1.69
PDCD2-202ENST00000392090 NGEFQ8N5V2 710 aa25.61■■□□□ 1.69
PDCD2-202ENST00000392090 NRXN2Q9P2S2 1712 aa25.6■■□□□ 1.69
PDCD2-202ENST00000392090 APAF1O14727 1248 aa25.6■■□□□ 1.69
PDCD2-202ENST00000392090 CLEC4GQ6UXB4 293 aa25.6■■□□□ 1.69
PDCD2-202ENST00000392090 BCORQ6W2J9 1755 aa25.59■■□□□ 1.69
PDCD2-202ENST00000392090 CCDC184Q52MB2 194 aa25.59■■□□□ 1.69
PDCD2-202ENST00000392090 DALRD3Q5D0E6 543 aaKnown RBP25.59■■□□□ 1.69
PDCD2-202ENST00000392090 MYL6BP14649 208 aa25.58■■□□□ 1.69
PDCD2-202ENST00000392090 BRCA1P38398 1863 aaKnown RBP25.57■■□□□ 1.68
PDCD2-202ENST00000392090 CHL1O00533 1208 aa25.57■■□□□ 1.68
PDCD2-202ENST00000392090 EIF2S2P20042 333 aaKnown RBP25.57■■□□□ 1.68
PDCD2-202ENST00000392090 ARHGAP27Q6ZUM4 889 aa25.56■■□□□ 1.68
PDCD2-202ENST00000392090 C2CD5Q86YS7 1000 aa25.56■■□□□ 1.68
PDCD2-202ENST00000392090 CNBD1Q8NA66 436 aa25.56■■□□□ 1.68
PDCD2-202ENST00000392090 MRS2Q9HD23 443 aa25.56■■□□□ 1.68
PDCD2-202ENST00000392090 H0YIN7 160 aa25.55■■□□□ 1.68
PDCD2-202ENST00000392090 RGL2O15211 777 aa25.55■■□□□ 1.68
PDCD2-202ENST00000392090 PRR5LQ6MZQ0 368 aa25.55■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms