RNA–Protein interactions for RNA: ENST00000392000.4

LRRFIP1-204, Transcript of LRR binding FLII interacting protein 1, humanhuman

TSL 1 (best) BASIC

Gene LRRFIP1, Length 3,365 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRFIP1-204ENST00000392000 PPP4R3BQ5MIZ7 849 aa17.48■□□□□ 0.39
LRRFIP1-204ENST00000392000 RGS12O14924 1447 aa17.48■□□□□ 0.39
LRRFIP1-204ENST00000392000 WDR33Q9C0J8 1336 aaKnown RBP17.48■□□□□ 0.39
LRRFIP1-204ENST00000392000 A2ML1A8K2U0 1454 aa17.48■□□□□ 0.39
LRRFIP1-204ENST00000392000 NBPF7P0C2Y1 421 aaPredicted RBP17.48■□□□□ 0.39
LRRFIP1-204ENST00000392000 ABTB2Q8N961 1025 aa17.48■□□□□ 0.39
LRRFIP1-204ENST00000392000 AMOTL2Q9Y2J4 779 aa17.48■□□□□ 0.39
LRRFIP1-204ENST00000392000 CCDC30Q5VVM6 783 aa17.48■□□□□ 0.39
LRRFIP1-204ENST00000392000 IL17REQ8NFR9 667 aa17.48■□□□□ 0.39
LRRFIP1-204ENST00000392000 TAF7Q15545 349 aaPredicted RBP17.47■□□□□ 0.39
LRRFIP1-204ENST00000392000 RASEFQ8IZ41 740 aa17.47■□□□□ 0.39
LRRFIP1-204ENST00000392000 AK2P54819 239 aa17.47■□□□□ 0.39
LRRFIP1-204ENST00000392000 PRPF40BQ6NWY9 871 aaKnown RBP17.47■□□□□ 0.39
LRRFIP1-204ENST00000392000 JAKMIP1Q96N16 626 aaKnown RBP17.47■□□□□ 0.39
LRRFIP1-204ENST00000392000 USP44Q9H0E7 712 aa17.47■□□□□ 0.39
LRRFIP1-204ENST00000392000 CLEC17AQ6ZS10 378 aa17.46■□□□□ 0.39
LRRFIP1-204ENST00000392000 DIAPH3Q9NSV4 1193 aa17.46■□□□□ 0.39
LRRFIP1-204ENST00000392000 DYNC1I1O14576 645 aa17.46■□□□□ 0.39
LRRFIP1-204ENST00000392000 SYT1P21579 422 aa17.46■□□□□ 0.39
LRRFIP1-204ENST00000392000 KNDC1Q76NI1 1749 aa17.46■□□□□ 0.39
LRRFIP1-204ENST00000392000 GNAI3P08754 354 aa17.46■□□□□ 0.39
LRRFIP1-204ENST00000392000 AIMP1Q12904 312 aaKnown RBP17.46■□□□□ 0.39
LRRFIP1-204ENST00000392000 LGR6Q9HBX8 967 aa17.46■□□□□ 0.39
LRRFIP1-204ENST00000392000 PA2G4Q9UQ80 394 aaKnown RBP17.46■□□□□ 0.39
LRRFIP1-204ENST00000392000 CHAF1AQ13111 956 aaPredicted RBP17.45■□□□□ 0.38
LRRFIP1-204ENST00000392000 TSPOAP1O95153 1857 aa17.45■□□□□ 0.38
LRRFIP1-204ENST00000392000 ATP7BP35670 1465 aa17.45■□□□□ 0.38
LRRFIP1-204ENST00000392000 GNAT3A8MTJ3 354 aa17.45■□□□□ 0.38
LRRFIP1-204ENST00000392000 STX6O43752 255 aa17.45■□□□□ 0.38
LRRFIP1-204ENST00000392000 LARGE1O95461 756 aa17.45■□□□□ 0.38
LRRFIP1-204ENST00000392000 HDGFP51858 240 aaKnown RBP17.45■□□□□ 0.38
LRRFIP1-204ENST00000392000 ATP8B2P98198 1209 aa17.45■□□□□ 0.38
LRRFIP1-204ENST00000392000 NEO1Q92859 1461 aa17.45■□□□□ 0.38
LRRFIP1-204ENST00000392000 CDK12Q9NYV4 1490 aaPredicted RBP17.45■□□□□ 0.38
LRRFIP1-204ENST00000392000 PI4KAP2A4QPH2 592 aa17.45■□□□□ 0.38
LRRFIP1-204ENST00000392000 PI4KAP1Q8N8J0 262 aa17.45■□□□□ 0.38
LRRFIP1-204ENST00000392000 C16orf45Q96MC5 204 aaPredicted RBP17.45■□□□□ 0.38
LRRFIP1-204ENST00000392000 HS1BP3Q53T59 392 aa17.44■□□□□ 0.38
LRRFIP1-204ENST00000392000 AATKQ6ZMQ8 1374 aa17.44■□□□□ 0.38
LRRFIP1-204ENST00000392000 GJB2P29033 226 aa17.43■□□□□ 0.38
LRRFIP1-204ENST00000392000 MPRIPQ6WCQ1 1025 aa17.43■□□□□ 0.38
LRRFIP1-204ENST00000392000 SIL1Q9H173 461 aa17.43■□□□□ 0.38
LRRFIP1-204ENST00000392000 KIF3AQ9Y496 699 aa17.43■□□□□ 0.38
LRRFIP1-204ENST00000392000 IBTKQ9P2D0 1353 aaPredicted RBP17.43■□□□□ 0.38
LRRFIP1-204ENST00000392000 MCM2P49736 904 aa17.43■□□□□ 0.38
LRRFIP1-204ENST00000392000 CCDC183Q5T5S1 534 aa17.43■□□□□ 0.38
LRRFIP1-204ENST00000392000 MAP7D2Q96T17 732 aa17.43■□□□□ 0.38
LRRFIP1-204ENST00000392000 PYCARDQ9ULZ3 195 aa17.43■□□□□ 0.38
LRRFIP1-204ENST00000392000 SETD1BQ9UPS6 1966 aaKnown RBP17.43■□□□□ 0.38
LRRFIP1-204ENST00000392000 CHPF2Q9P2E5 772 aa17.43■□□□□ 0.38
LRRFIP1-204ENST00000392000 PREX1Q8TCU6 1659 aa17.42■□□□□ 0.38
LRRFIP1-204ENST00000392000 LUZP1Q86V48 1076 aa17.42■□□□□ 0.38
LRRFIP1-204ENST00000392000 LRRC59Q96AG4 307 aaKnown RBP17.42■□□□□ 0.38
LRRFIP1-204ENST00000392000 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.42■□□□□ 0.38
LRRFIP1-204ENST00000392000 V9GYY5 206 aaPredicted RBP17.42■□□□□ 0.38
LRRFIP1-204ENST00000392000 SOS1Q07889 1333 aaPredicted RBP17.42■□□□□ 0.38
LRRFIP1-204ENST00000392000 ZSCAN22P10073 491 aaPredicted RBP17.41■□□□□ 0.38
LRRFIP1-204ENST00000392000 U2AF2P26368 475 aaKnown RBP eCLIP17.41■□□□□ 0.38
LRRFIP1-204ENST00000392000 A0A087WWV3 80 aa17.41■□□□□ 0.38
LRRFIP1-204ENST00000392000 RHPN1Q8TCX5 695 aa17.41■□□□□ 0.38
LRRFIP1-204ENST00000392000 TRIM5Q9C035 493 aa17.41■□□□□ 0.38
LRRFIP1-204ENST00000392000 DLG5Q8TDM6 1919 aa17.41■□□□□ 0.38
LRRFIP1-204ENST00000392000 PTGS1P23219 599 aa17.4■□□□□ 0.38
LRRFIP1-204ENST00000392000 FGD1P98174 961 aa17.4■□□□□ 0.38
LRRFIP1-204ENST00000392000 LRMPQ12912 555 aa17.4■□□□□ 0.38
LRRFIP1-204ENST00000392000 ADCK5Q3MIX3 580 aa17.4■□□□□ 0.38
LRRFIP1-204ENST00000392000 KIF20BQ96Q89 1820 aa17.4■□□□□ 0.38
LRRFIP1-204ENST00000392000 CRB1P82279 1406 aa17.4■□□□□ 0.38
LRRFIP1-204ENST00000392000 PRAMEF22A3QJZ6 481 aa17.4■□□□□ 0.38
LRRFIP1-204ENST00000392000 MAPK8IP2Q13387 824 aaPredicted RBP17.4■□□□□ 0.38
LRRFIP1-204ENST00000392000 NAA30Q147X3 362 aaPredicted RBP17.4■□□□□ 0.38
LRRFIP1-204ENST00000392000 DDX11Q96FC9 970 aa17.4■□□□□ 0.38
LRRFIP1-204ENST00000392000 SNX14Q9Y5W7 946 aa17.4■□□□□ 0.38
LRRFIP1-204ENST00000392000 PIP4K2AP48426 406 aaPredicted RBP17.39■□□□□ 0.37
LRRFIP1-204ENST00000392000 COL9A3Q14050 684 aaPredicted RBP17.39■□□□□ 0.37
LRRFIP1-204ENST00000392000 LARP1BQ659C4 914 aaKnown RBP17.39■□□□□ 0.37
LRRFIP1-204ENST00000392000 BICD2Q8TD16 824 aa17.39■□□□□ 0.37
LRRFIP1-204ENST00000392000 CWF19L2Q2TBE0 894 aaKnown RBP17.39■□□□□ 0.37
LRRFIP1-204ENST00000392000 PDCL2Q8N4E4 241 aa17.39■□□□□ 0.37
LRRFIP1-204ENST00000392000 PDRG1Q9NUG6 133 aa17.39■□□□□ 0.37
LRRFIP1-204ENST00000392000 C9orf78Q9NZ63 289 aaPredicted RBP17.39■□□□□ 0.37
LRRFIP1-204ENST00000392000 RUFY3Q7L099 469 aa17.38■□□□□ 0.37
LRRFIP1-204ENST00000392000 KLHDC4Q8TBB5 520 aa17.38■□□□□ 0.37
LRRFIP1-204ENST00000392000 CCDC8Q9H0W5 538 aaPredicted RBP17.38■□□□□ 0.37
LRRFIP1-204ENST00000392000 LIMCH1Q9UPQ0 1083 aa17.38■□□□□ 0.37
LRRFIP1-204ENST00000392000 NDUFB9Q9Y6M9 179 aa17.38■□□□□ 0.37
LRRFIP1-204ENST00000392000 KIAA0232Q92628 1395 aa17.38■□□□□ 0.37
LRRFIP1-204ENST00000392000 RIOK3O14730 519 aaKnown RBP17.38■□□□□ 0.37
LRRFIP1-204ENST00000392000 ZBTB9Q96C00 473 aa17.38■□□□□ 0.37
LRRFIP1-204ENST00000392000 BCL2L12Q9HB09 334 aa17.38■□□□□ 0.37
LRRFIP1-204ENST00000392000 F13A1P00488 732 aa17.37■□□□□ 0.37
LRRFIP1-204ENST00000392000 NRBP1Q9UHY1 535 aa17.37■□□□□ 0.37
LRRFIP1-204ENST00000392000 EID1Q9Y6B2 187 aa17.37■□□□□ 0.37
LRRFIP1-204ENST00000392000 MCM5P33992 734 aa17.37■□□□□ 0.37
LRRFIP1-204ENST00000392000 PTH1RQ03431 593 aa17.37■□□□□ 0.37
LRRFIP1-204ENST00000392000 ATP2B3Q16720 1220 aa17.37■□□□□ 0.37
LRRFIP1-204ENST00000392000 CCDC186Q7Z3E2 898 aa17.37■□□□□ 0.37
LRRFIP1-204ENST00000392000 CNTROBQ8N137 903 aa17.37■□□□□ 0.37
LRRFIP1-204ENST00000392000 MYRIPQ8NFW9 859 aa17.37■□□□□ 0.37
LRRFIP1-204ENST00000392000 PIBF1Q8WXW3 757 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms