RNA–Protein interactions for RNA: ENST00000391855.2

GGPS1-203, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 2 BASIC

Gene GGPS1, Length 1,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-203ENST00000391855 DCTN1Q14203 1278 aa16.7■□□□□ 0.26
GGPS1-203ENST00000391855 INTS5Q6P9B9 1019 aaKnown RBP16.7■□□□□ 0.26
GGPS1-203ENST00000391855 NLGN1Q8N2Q7 840 aa16.7■□□□□ 0.26
GGPS1-203ENST00000391855 ARHGEF1Q92888 912 aaKnown RBP16.7■□□□□ 0.26
GGPS1-203ENST00000391855 RUNDC1Q96C34 613 aa16.7■□□□□ 0.26
GGPS1-203ENST00000391855 SOS1Q07889 1333 aaPredicted RBP16.7■□□□□ 0.26
GGPS1-203ENST00000391855 ANP32CO43423 234 aa16.7■□□□□ 0.26
GGPS1-203ENST00000391855 SMIM5Q71RC9 77 aa16.69■□□□□ 0.26
GGPS1-203ENST00000391855 USP42Q9H9J4 1324 aaKnown RBP16.69■□□□□ 0.26
GGPS1-203ENST00000391855 TMPOP42166 694 aaKnown RBP16.68■□□□□ 0.26
GGPS1-203ENST00000391855 RIPK4P57078 832 aa16.68■□□□□ 0.26
GGPS1-203ENST00000391855 ZBTB1Q9Y2K1 713 aa16.68■□□□□ 0.26
GGPS1-203ENST00000391855 COL15A1P39059 1388 aa16.68■□□□□ 0.26
GGPS1-203ENST00000391855 KDM3BQ7LBC6 1761 aa16.67■□□□□ 0.26
GGPS1-203ENST00000391855 KLHL34Q8N239 644 aa16.67■□□□□ 0.26
GGPS1-203ENST00000391855 ADAMTS8Q9UP79 889 aa16.67■□□□□ 0.26
GGPS1-203ENST00000391855 CD2APQ9Y5K6 639 aa16.67■□□□□ 0.26
GGPS1-203ENST00000391855 A0A087WZG4 1122 aa16.66■□□□□ 0.26
GGPS1-203ENST00000391855 KCNQ3O43525 872 aa16.66■□□□□ 0.26
GGPS1-203ENST00000391855 SNRPA1P09661 255 aaKnown RBP16.66■□□□□ 0.26
GGPS1-203ENST00000391855 GYS1P13807 737 aa16.66■□□□□ 0.26
GGPS1-203ENST00000391855 BABAM1Q9NWV8 329 aa16.66■□□□□ 0.26
GGPS1-203ENST00000391855 ZPR1O75312 459 aa16.65■□□□□ 0.26
GGPS1-203ENST00000391855 IL6STP40189 918 aaPredicted RBP16.65■□□□□ 0.26
GGPS1-203ENST00000391855 CCDC146Q8IYE0 955 aa16.65■□□□□ 0.26
GGPS1-203ENST00000391855 LAMB4A4D0S4 1761 aa16.65■□□□□ 0.26
GGPS1-203ENST00000391855 MMP10P09238 476 aa16.64■□□□□ 0.25
GGPS1-203ENST00000391855 NPM2Q86SE8 214 aaKnown RBP16.64■□□□□ 0.25
GGPS1-203ENST00000391855 NARFQ9UHQ1 456 aa16.64■□□□□ 0.25
GGPS1-203ENST00000391855 CANXP27824 592 aaKnown RBP16.63■□□□□ 0.25
GGPS1-203ENST00000391855 EIF5P55010 431 aaKnown RBP16.63■□□□□ 0.25
GGPS1-203ENST00000391855 THUMPD2Q9BTF0 503 aaKnown RBP16.62■□□□□ 0.25
GGPS1-203ENST00000391855 SRP68Q9UHB9 627 aaKnown RBP16.62■□□□□ 0.25
GGPS1-203ENST00000391855 PARP3Q9Y6F1 533 aa16.62■□□□□ 0.25
GGPS1-203ENST00000391855 SCN7AQ01118 1682 aa16.61■□□□□ 0.25
GGPS1-203ENST00000391855 USPL1Q5W0Q7 1092 aa16.61■□□□□ 0.25
GGPS1-203ENST00000391855 TSPYL4Q9UJ04 414 aa16.61■□□□□ 0.25
GGPS1-203ENST00000391855 RRP7AQ9Y3A4 280 aaKnown RBP16.61■□□□□ 0.25
GGPS1-203ENST00000391855 C10orf71Q711Q0 1435 aa16.6■□□□□ 0.25
GGPS1-203ENST00000391855 EIF4A1P60842 406 aaKnown RBP16.6■□□□□ 0.25
GGPS1-203ENST00000391855 FKBP8Q14318 412 aa16.6■□□□□ 0.25
GGPS1-203ENST00000391855 NLGN2Q8NFZ4 835 aa16.6■□□□□ 0.25
GGPS1-203ENST00000391855 MRS2Q9HD23 443 aa16.6■□□□□ 0.25
GGPS1-203ENST00000391855 MIS18AQ9NYP9 233 aa16.6■□□□□ 0.25
GGPS1-203ENST00000391855 USP16Q9Y5T5 823 aa16.6■□□□□ 0.25
GGPS1-203ENST00000391855 KIF13BQ9NQT8 1826 aa16.6■□□□□ 0.25
GGPS1-203ENST00000391855 NEUROD2Q15784 382 aa16.59■□□□□ 0.25
GGPS1-203ENST00000391855 TRIM35Q9UPQ4 493 aa16.59■□□□□ 0.25
GGPS1-203ENST00000391855 GIGYF1O75420 1035 aaPredicted RBP16.58■□□□□ 0.24
GGPS1-203ENST00000391855 A1BGP04217 495 aa16.58■□□□□ 0.24
GGPS1-203ENST00000391855 CALD1Q05682 793 aaKnown RBP16.58■□□□□ 0.24
GGPS1-203ENST00000391855 ERBB4Q15303 1308 aa16.57■□□□□ 0.24
GGPS1-203ENST00000391855 PRAMEF22A3QJZ6 481 aa16.57■□□□□ 0.24
GGPS1-203ENST00000391855 RGL2O15211 777 aa16.57■□□□□ 0.24
GGPS1-203ENST00000391855 ZNF330Q9Y3S2 320 aaPredicted RBP16.57■□□□□ 0.24
GGPS1-203ENST00000391855 BCORQ6W2J9 1755 aa16.56■□□□□ 0.24
GGPS1-203ENST00000391855 APAF1O14727 1248 aa16.56■□□□□ 0.24
GGPS1-203ENST00000391855 TM4SF1P30408 202 aa16.56■□□□□ 0.24
GGPS1-203ENST00000391855 TGFB2P61812 414 aa16.56■□□□□ 0.24
GGPS1-203ENST00000391855 DDR1Q08345 913 aa16.56■□□□□ 0.24
GGPS1-203ENST00000391855 GPR162Q16538 588 aa16.56■□□□□ 0.24
GGPS1-203ENST00000391855 CCDC184Q52MB2 194 aa16.56■□□□□ 0.24
GGPS1-203ENST00000391855 POLRMTO00411 1230 aaKnown RBP16.55■□□□□ 0.24
GGPS1-203ENST00000391855 BCL2L12Q9HB09 334 aa16.55■□□□□ 0.24
GGPS1-203ENST00000391855 CHL1O00533 1208 aa16.54■□□□□ 0.24
GGPS1-203ENST00000391855 NFIXQ14938 502 aa16.54■□□□□ 0.24
GGPS1-203ENST00000391855 DZIP3Q86Y13 1208 aaKnown RBP16.54■□□□□ 0.24
GGPS1-203ENST00000391855 ZNF652Q9Y2D9 606 aa16.54■□□□□ 0.24
GGPS1-203ENST00000391855 NRXN2Q9P2S2 1712 aa16.54■□□□□ 0.24
GGPS1-203ENST00000391855 PXDNLA1KZ92 1463 aa16.54■□□□□ 0.24
GGPS1-203ENST00000391855 GRIN3BO60391 1043 aa16.53■□□□□ 0.24
GGPS1-203ENST00000391855 CAMTA2O94983 1202 aa16.53■□□□□ 0.24
GGPS1-203ENST00000391855 CFAP44Q96MT7 982 aa16.53■□□□□ 0.24
GGPS1-203ENST00000391855 TBC1D2BQ9UPU7 963 aa16.53■□□□□ 0.24
GGPS1-203ENST00000391855 CARMIL3Q8ND23 1372 aa16.53■□□□□ 0.24
GGPS1-203ENST00000391855 KIAA1551Q9HCM1 1747 aa16.53■□□□□ 0.24
GGPS1-203ENST00000391855 NBPF26B4DH59 902 aa16.53■□□□□ 0.24
GGPS1-203ENST00000391855 NBPF10Q6P3W6 841 aaKnown RBP16.53■□□□□ 0.24
GGPS1-203ENST00000391855 CLEC4GQ6UXB4 293 aa16.53■□□□□ 0.24
GGPS1-203ENST00000391855 PELP1Q8IZL8 1130 aaKnown RBP16.53■□□□□ 0.24
GGPS1-203ENST00000391855 NBPF15Q8N660 670 aa16.53■□□□□ 0.24
GGPS1-203ENST00000391855 HOXB7P09629 217 aa16.52■□□□□ 0.23
GGPS1-203ENST00000391855 IFT57Q9NWB7 429 aa16.52■□□□□ 0.23
GGPS1-203ENST00000391855 SERPINB2P05120 415 aa16.51■□□□□ 0.23
GGPS1-203ENST00000391855 GNAI1P63096 354 aa16.51■□□□□ 0.23
GGPS1-203ENST00000391855 CCDC27Q2M243 656 aa16.51■□□□□ 0.23
GGPS1-203ENST00000391855 LAS1LQ9Y4W2 734 aaKnown RBP16.51■□□□□ 0.23
GGPS1-203ENST00000391855 AFDNP55196 1824 aaKnown RBP16.5■□□□□ 0.23
GGPS1-203ENST00000391855 PIP4K2AP48426 406 aaPredicted RBP16.5■□□□□ 0.23
GGPS1-203ENST00000391855 CHD4Q14839 1912 aa16.49■□□□□ 0.23
GGPS1-203ENST00000391855 TBC1D9BQ66K14 1250 aa16.49■□□□□ 0.23
GGPS1-203ENST00000391855 SETDB2Q96T68 719 aa16.49■□□□□ 0.23
GGPS1-203ENST00000391855 ERVV-1B6SEH8 477 aa16.48■□□□□ 0.23
GGPS1-203ENST00000391855 ZNF853P0CG23 659 aa16.48■□□□□ 0.23
GGPS1-203ENST00000391855 YBX3P16989 372 aaKnown RBP eCLIP16.48■□□□□ 0.232e-7■■□□□ 13
GGPS1-203ENST00000391855 YY1P25490 414 aa16.48■□□□□ 0.23
GGPS1-203ENST00000391855 KIF6Q6ZMV9 814 aa16.48■□□□□ 0.23
GGPS1-203ENST00000391855 BICDL1Q6ZP65 573 aa16.48■□□□□ 0.23
GGPS1-203ENST00000391855 PDZRN3Q9UPQ7 1066 aa16.48■□□□□ 0.23
GGPS1-203ENST00000391855 N4BP2Q86UW6 1770 aaPredicted RBP16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms