RNA–Protein interactions for RNA: ENST00000391827.2

NLRP3-205, Transcript of NLR family pyrin domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NLRP3, Length 2,940 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLRP3-205ENST00000391827 CRYBG1Q9Y4K1 1723 aa13.21□□□□□ -0.29
NLRP3-205ENST00000391827 ADCY9O60503 1353 aa13.21□□□□□ -0.29
NLRP3-205ENST00000391827 PLEKHG2Q9H7P9 1386 aa13.21□□□□□ -0.29
NLRP3-205ENST00000391827 ALS2Q96Q42 1657 aa13.21□□□□□ -0.29
NLRP3-205ENST00000391827 XRCC6P12956 609 aaKnown RBP eCLIP13.21□□□□□ -0.3
NLRP3-205ENST00000391827 MRE11P49959 708 aa13.21□□□□□ -0.3
NLRP3-205ENST00000391827 LRRC59Q96AG4 307 aaKnown RBP13.21□□□□□ -0.3
NLRP3-205ENST00000391827 SSFA2P28290 1259 aa13.2□□□□□ -0.3
NLRP3-205ENST00000391827 MTX1Q13505 466 aa13.2□□□□□ -0.3
NLRP3-205ENST00000391827 RBM33Q96EV2 1170 aaKnown RBP13.2□□□□□ -0.3
NLRP3-205ENST00000391827 ORAI2Q96SN7 254 aa13.2□□□□□ -0.3
NLRP3-205ENST00000391827 C1orf167Q5SNV9 1468 aa13.2□□□□□ -0.3
NLRP3-205ENST00000391827 MCM2P49736 904 aa13.2□□□□□ -0.3
NLRP3-205ENST00000391827 PPP1R42Q7Z4L9 355 aa13.2□□□□□ -0.3
NLRP3-205ENST00000391827 DBF4Q9UBU7 674 aaPredicted RBP13.2□□□□□ -0.3
NLRP3-205ENST00000391827 GOLGA6L22H0YM25 854 aa13.19□□□□□ -0.3
NLRP3-205ENST00000391827 C1orf141Q5JVX7 400 aa13.19□□□□□ -0.3
NLRP3-205ENST00000391827 ANKRD24Q8TF21 1146 aa13.19□□□□□ -0.3
NLRP3-205ENST00000391827 GZF1Q9H116 711 aaPredicted RBP13.19□□□□□ -0.3
NLRP3-205ENST00000391827 FOXD4L1Q9NU39 408 aa13.19□□□□□ -0.3
NLRP3-205ENST00000391827 USP42Q9H9J4 1324 aaKnown RBP13.19□□□□□ -0.3
NLRP3-205ENST00000391827 MCCP23508 829 aa13.19□□□□□ -0.3
NLRP3-205ENST00000391827 PI4KAP2A4QPH2 592 aa13.19□□□□□ -0.3
NLRP3-205ENST00000391827 KCNQ3O43525 872 aa13.19□□□□□ -0.3
NLRP3-205ENST00000391827 ALDH1L1O75891 902 aa13.19□□□□□ -0.3
NLRP3-205ENST00000391827 BAG4O95429 457 aaKnown RBP13.19□□□□□ -0.3
NLRP3-205ENST00000391827 EIF2S2P20042 333 aaKnown RBP13.19□□□□□ -0.3
NLRP3-205ENST00000391827 HSP90AB4PQ58FF6 505 aa13.19□□□□□ -0.3
NLRP3-205ENST00000391827 PI4KAP1Q8N8J0 262 aa13.19□□□□□ -0.3
NLRP3-205ENST00000391827 KIF1BPQ96EK5 621 aa13.19□□□□□ -0.3
NLRP3-205ENST00000391827 RHPN1Q8TCX5 695 aa13.18□□□□□ -0.3
NLRP3-205ENST00000391827 GIGYF1O75420 1035 aaPredicted RBP13.18□□□□□ -0.3
NLRP3-205ENST00000391827 NBPF7P0C2Y1 421 aaPredicted RBP13.18□□□□□ -0.3
NLRP3-205ENST00000391827 TSHZ3Q63HK5 1081 aa13.18□□□□□ -0.3
NLRP3-205ENST00000391827 MPRIPQ6WCQ1 1025 aa13.18□□□□□ -0.3
NLRP3-205ENST00000391827 KLHL40Q2TBA0 621 aa13.17□□□□□ -0.3
NLRP3-205ENST00000391827 PI4K2BQ8TCG2 481 aa13.17□□□□□ -0.3
NLRP3-205ENST00000391827 SURF6O75683 361 aaKnown RBP13.17□□□□□ -0.3
NLRP3-205ENST00000391827 HDAC5Q9UQL6 1122 aa13.17□□□□□ -0.3
NLRP3-205ENST00000391827 SRGAP3O43295 1099 aa13.16□□□□□ -0.3
NLRP3-205ENST00000391827 KRT28Q7Z3Y7 464 aa13.16□□□□□ -0.3
NLRP3-205ENST00000391827 DCCP43146 1447 aa13.16□□□□□ -0.3
NLRP3-205ENST00000391827 TRIM6-TRIM34B2RNG4 842 aa13.16□□□□□ -0.3
NLRP3-205ENST00000391827 GRPEL1Q9HAV7 217 aa13.16□□□□□ -0.3
NLRP3-205ENST00000391827 ERBB3P21860 1342 aa13.16□□□□□ -0.3
NLRP3-205ENST00000391827 CUL4AQ13619 759 aa13.16□□□□□ -0.3
NLRP3-205ENST00000391827 KSR2Q6VAB6 950 aa13.16□□□□□ -0.3
NLRP3-205ENST00000391827 UNC5CLQ8IV45 518 aa13.16□□□□□ -0.3
NLRP3-205ENST00000391827 RILPL2Q969X0 211 aa13.16□□□□□ -0.3
NLRP3-205ENST00000391827 TTC41PQ6P2S7 1318 aa13.15□□□□□ -0.3
NLRP3-205ENST00000391827 C19orf44Q9H6X5 657 aa13.15□□□□□ -0.3
NLRP3-205ENST00000391827 HYPKQ9NX55 129 aa13.15□□□□□ -0.3
NLRP3-205ENST00000391827 AXIN2Q9Y2T1 843 aa13.15□□□□□ -0.3
NLRP3-205ENST00000391827 UTYO14607 1347 aa13.15□□□□□ -0.3
NLRP3-205ENST00000391827 AK9Q5TCS8 1911 aa13.15□□□□□ -0.3
NLRP3-205ENST00000391827 ZBTB7CA1YPR0 619 aa13.15□□□□□ -0.3
NLRP3-205ENST00000391827 INTS4Q96HW7 963 aaKnown RBP13.15□□□□□ -0.3
NLRP3-205ENST00000391827 IL1RAPL2Q9NP60 686 aa13.15□□□□□ -0.3
NLRP3-205ENST00000391827 NEK4P51957 841 aa13.14□□□□□ -0.31
NLRP3-205ENST00000391827 RGPD5Q99666 1765 aa13.14□□□□□ -0.31
NLRP3-205ENST00000391827 SCN11AQ9UI33 1791 aa13.14□□□□□ -0.31
NLRP3-205ENST00000391827 ANO2Q9NQ90 1003 aa13.14□□□□□ -0.31
NLRP3-205ENST00000391827 COL18A1P39060 1754 aa13.13□□□□□ -0.31
NLRP3-205ENST00000391827 HSPA4P34932 840 aa13.13□□□□□ -0.31
NLRP3-205ENST00000391827 XPCQ01831 940 aaPredicted RBP13.13□□□□□ -0.31
NLRP3-205ENST00000391827 NUTM1Q86Y26 1132 aa13.13□□□□□ -0.31
NLRP3-205ENST00000391827 ZGPATQ8N5A5 531 aaKnown RBP13.13□□□□□ -0.31
NLRP3-205ENST00000391827 TMX3Q96JJ7 454 aa13.13□□□□□ -0.31
NLRP3-205ENST00000391827 PALD1Q9ULE6 856 aa13.13□□□□□ -0.31
NLRP3-205ENST00000391827 MRC1P22897 1456 aa13.13□□□□□ -0.31
NLRP3-205ENST00000391827 PROSER2Q86WR7 435 aaPredicted RBP13.13□□□□□ -0.31
NLRP3-205ENST00000391827 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.13□□□□□ -0.31
NLRP3-205ENST00000391827 MAP3K2Q9Y2U5 619 aa13.13□□□□□ -0.31
NLRP3-205ENST00000391827 SGSM2O43147 1006 aa13.12□□□□□ -0.31
NLRP3-205ENST00000391827 DDX21Q9NR30 783 aaKnown RBP eCLIP13.12□□□□□ -0.31
NLRP3-205ENST00000391827 ZDHHC9Q9Y397 364 aa13.12□□□□□ -0.31
NLRP3-205ENST00000391827 ERC1Q8IUD2 1116 aa13.12□□□□□ -0.31
NLRP3-205ENST00000391827 CNTROBQ8N137 903 aa13.12□□□□□ -0.31
NLRP3-205ENST00000391827 LINS1Q8NG48 757 aa13.12□□□□□ -0.31
NLRP3-205ENST00000391827 PANK2Q9BZ23 570 aa13.12□□□□□ -0.31
NLRP3-205ENST00000391827 LMBRD1Q9NUN5 540 aa13.12□□□□□ -0.31
NLRP3-205ENST00000391827 RAD50Q92878 1312 aa13.12□□□□□ -0.31
NLRP3-205ENST00000391827 KDM6AO15550 1401 aaPredicted RBP13.12□□□□□ -0.31
NLRP3-205ENST00000391827 PKP1Q13835 747 aa13.12□□□□□ -0.31
NLRP3-205ENST00000391827 GLRX3O76003 335 aaKnown RBP13.11□□□□□ -0.31
NLRP3-205ENST00000391827 ANXA1P04083 346 aa13.11□□□□□ -0.31
NLRP3-205ENST00000391827 PROSER3Q2NL68 480 aa13.11□□□□□ -0.31
NLRP3-205ENST00000391827 GAS2L3Q86XJ1 694 aa13.11□□□□□ -0.31
NLRP3-205ENST00000391827 DDX58O95786 925 aaKnown RBP13.11□□□□□ -0.31
NLRP3-205ENST00000391827 PDIA6Q15084 440 aa13.11□□□□□ -0.31
NLRP3-205ENST00000391827 IL25Q9H293 177 aa13.11□□□□□ -0.31
NLRP3-205ENST00000391827 DDX49Q9Y6V7 483 aaKnown RBP13.11□□□□□ -0.31
NLRP3-205ENST00000391827 C5P01031 1676 aa13.11□□□□□ -0.31
NLRP3-205ENST00000391827 PKD1L3Q7Z443 1732 aa13.1□□□□□ -0.31
NLRP3-205ENST00000391827 NPHP3Q7Z494 1330 aa13.1□□□□□ -0.31
NLRP3-205ENST00000391827 ZNF445P59923 1031 aa13.1□□□□□ -0.31
NLRP3-205ENST00000391827 MCTP1Q6DN14 999 aa13.1□□□□□ -0.31
NLRP3-205ENST00000391827 C9orf78Q9NZ63 289 aaPredicted RBP13.1□□□□□ -0.31
NLRP3-205ENST00000391827 RBM10P98175 930 aaKnown RBP13.09□□□□□ -0.31
NLRP3-205ENST00000391827 CLASRPQ8N2M8 674 aaKnown RBP13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms