RNA–Protein interactions for RNA: ENST00000390466.1

TRAV39-201, Transcript of T cell receptor alpha variable 39, humanhuman

APPRIS P1 BASIC

Gene TRAV39, Length 331 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV39-201ENST00000390466 USP48Q86UV5 1035 aa4.18□□□□□ -1.74
TRAV39-201ENST00000390466 PDCL2Q8N4E4 241 aa4.18□□□□□ -1.74
TRAV39-201ENST00000390466 AKT1S1Q96B36 256 aa4.18□□□□□ -1.74
TRAV39-201ENST00000390466 MEIS3Q99687 375 aa4.18□□□□□ -1.74
TRAV39-201ENST00000390466 FEZ1Q99689 392 aa4.18□□□□□ -1.74
TRAV39-201ENST00000390466 ARID3AQ99856 593 aa4.18□□□□□ -1.74
TRAV39-201ENST00000390466 API5Q9BZZ5 524 aaKnown RBP4.18□□□□□ -1.74
TRAV39-201ENST00000390466 SRCIN1Q9C0H9 1055 aa4.18□□□□□ -1.74
TRAV39-201ENST00000390466 CHMP4BQ9H444 224 aaKnown RBP4.18□□□□□ -1.74
TRAV39-201ENST00000390466 GDPD2Q9HCC8 539 aa4.18□□□□□ -1.74
TRAV39-201ENST00000390466 CABP2Q9NPB3 220 aa4.18□□□□□ -1.74
TRAV39-201ENST00000390466 POLKQ9UBT6 870 aa4.18□□□□□ -1.74
TRAV39-201ENST00000390466 STAP2Q9UGK3 403 aa4.18□□□□□ -1.74
TRAV39-201ENST00000390466 MORC2Q9Y6X9 1032 aaPredicted RBP4.18□□□□□ -1.74
TRAV39-201ENST00000390466 MYH7P12883 1935 aa4.18□□□□□ -1.74
TRAV39-201ENST00000390466 LMO7Q8WWI1 1683 aa4.18□□□□□ -1.74
TRAV39-201ENST00000390466 OVOS2A0A0J9YW53 1432 aa4.18□□□□□ -1.74
TRAV39-201ENST00000390466 OVOS2Q6IE36 1432 aa4.18□□□□□ -1.74
TRAV39-201ENST00000390466 EDC4Q6P2E9 1401 aaKnown RBP4.18□□□□□ -1.74
TRAV39-201ENST00000390466 AOX1Q06278 1338 aa4.18□□□□□ -1.74
TRAV39-201ENST00000390466 FER1L4A9Z1Z3 1794 aa4.17□□□□□ -1.74
TRAV39-201ENST00000390466 ADCY9O60503 1353 aa4.17□□□□□ -1.74
TRAV39-201ENST00000390466 MYH8P13535 1937 aa4.17□□□□□ -1.74
TRAV39-201ENST00000390466 JCADQ9P266 1359 aa4.17□□□□□ -1.74
TRAV39-201ENST00000390466 PIK3C2AO00443 1686 aa4.17□□□□□ -1.74
TRAV39-201ENST00000390466 ADAMTS7Q9UKP4 1686 aa4.17□□□□□ -1.74
TRAV39-201ENST00000390466 SPDYE4A6NLX3 237 aa4.17□□□□□ -1.74
TRAV39-201ENST00000390466 U2SURPO15042 1029 aaKnown RBP4.17□□□□□ -1.74
TRAV39-201ENST00000390466 NCLP19338 710 aaKnown RBP4.17□□□□□ -1.74
TRAV39-201ENST00000390466 MX1P20591 662 aa4.17□□□□□ -1.74
TRAV39-201ENST00000390466 CHMLP26374 656 aa4.17□□□□□ -1.74
TRAV39-201ENST00000390466 MCM2P49736 904 aa4.17□□□□□ -1.74
TRAV39-201ENST00000390466 GNAI1P63096 354 aa4.17□□□□□ -1.74
TRAV39-201ENST00000390466 TWISTNBQ3B726 338 aaPredicted RBP4.17□□□□□ -1.74
TRAV39-201ENST00000390466 RPAP2Q8IXW5 612 aaPredicted RBP4.17□□□□□ -1.74
TRAV39-201ENST00000390466 REM2Q8IYK8 340 aaPredicted RBP4.17□□□□□ -1.74
TRAV39-201ENST00000390466 PIP4P2Q8N4L2 257 aa4.17□□□□□ -1.74
TRAV39-201ENST00000390466 MPNDQ8N594 471 aa4.17□□□□□ -1.74
TRAV39-201ENST00000390466 KIF18AQ8NI77 898 aa4.17□□□□□ -1.74
TRAV39-201ENST00000390466 KCNB2Q92953 911 aa4.17□□□□□ -1.74
TRAV39-201ENST00000390466 SYAP1Q96A49 352 aaPredicted RBP4.17□□□□□ -1.74
TRAV39-201ENST00000390466 OGFRQ9NZT2 677 aa4.17□□□□□ -1.74
TRAV39-201ENST00000390466 CNPY2Q9Y2B0 182 aa4.17□□□□□ -1.74
TRAV39-201ENST00000390466 TECPR2O15040 1411 aa4.17□□□□□ -1.74
TRAV39-201ENST00000390466 C4AP0C0L4 1744 aa4.17□□□□□ -1.74
TRAV39-201ENST00000390466 C4BP0C0L5 1744 aa4.17□□□□□ -1.74
TRAV39-201ENST00000390466 CCDC171Q6TFL3 1326 aa4.17□□□□□ -1.74
TRAV39-201ENST00000390466 TTC21BQ7Z4L5 1316 aa4.17□□□□□ -1.74
TRAV39-201ENST00000390466 TTC21AQ8NDW8 1320 aa4.17□□□□□ -1.74
TRAV39-201ENST00000390466 RAD50Q92878 1312 aa4.17□□□□□ -1.74
TRAV39-201ENST00000390466 WDR33Q9C0J8 1336 aaKnown RBP4.17□□□□□ -1.74
TRAV39-201ENST00000390466 MRC1P22897 1456 aa4.17□□□□□ -1.74
TRAV39-201ENST00000390466 STRCQ7RTU9 1775 aa4.17□□□□□ -1.74
TRAV39-201ENST00000390466 MYO5AQ9Y4I1 1855 aaKnown RBP4.16□□□□□ -1.74
TRAV39-201ENST00000390466 SMTNL1A8MU46 457 aa4.16□□□□□ -1.74
TRAV39-201ENST00000390466 PHF14O94880 888 aa4.16□□□□□ -1.74
TRAV39-201ENST00000390466 LARGE1O95461 756 aa4.16□□□□□ -1.74
TRAV39-201ENST00000390466 PTGS1P23219 599 aa4.16□□□□□ -1.74
TRAV39-201ENST00000390466 HSPA4P34932 840 aa4.16□□□□□ -1.74
TRAV39-201ENST00000390466 NEK4P51957 841 aa4.16□□□□□ -1.74
TRAV39-201ENST00000390466 UBE2HP62256 183 aa4.16□□□□□ -1.74
TRAV39-201ENST00000390466 IRX5P78411 483 aaPredicted RBP4.16□□□□□ -1.74
TRAV39-201ENST00000390466 NAA30Q147X3 362 aaPredicted RBP4.16□□□□□ -1.74
TRAV39-201ENST00000390466 TERF2Q15554 542 aa4.16□□□□□ -1.74
TRAV39-201ENST00000390466 SLFNL1Q499Z3 407 aa4.16□□□□□ -1.74
TRAV39-201ENST00000390466 TAF3Q5VWG9 929 aa4.16□□□□□ -1.74
TRAV39-201ENST00000390466 NYAP1Q6ZVC0 841 aa4.16□□□□□ -1.74
TRAV39-201ENST00000390466 PLA2G4DQ86XP0 818 aa4.16□□□□□ -1.74
TRAV39-201ENST00000390466 UNC5CLQ8IV45 518 aa4.16□□□□□ -1.74
TRAV39-201ENST00000390466 NFATC2IPQ8NCF5 419 aa4.16□□□□□ -1.74
TRAV39-201ENST00000390466 TDRD7Q8NHU6 1098 aaKnown RBP4.16□□□□□ -1.74
TRAV39-201ENST00000390466 BBXQ8WY36 941 aaPredicted RBP4.16□□□□□ -1.74
TRAV39-201ENST00000390466 UBXN6Q9BZV1 441 aa4.16□□□□□ -1.74
TRAV39-201ENST00000390466 KCND1Q9NSA2 647 aa4.16□□□□□ -1.74
TRAV39-201ENST00000390466 DIAPH3Q9NSV4 1193 aa4.16□□□□□ -1.74
TRAV39-201ENST00000390466 MTMR6Q9Y217 621 aa4.16□□□□□ -1.74
TRAV39-201ENST00000390466 MRVI1Q9Y6F6 885 aa4.16□□□□□ -1.74
TRAV39-201ENST00000390466 LAMB4A4D0S4 1761 aa4.16□□□□□ -1.74
TRAV39-201ENST00000390466 LTN1O94822 1766 aa4.16□□□□□ -1.74
TRAV39-201ENST00000390466 PTPRCP08575 1304 aa4.16□□□□□ -1.74
TRAV39-201ENST00000390466 USP42Q9H9J4 1324 aaKnown RBP4.16□□□□□ -1.74
TRAV39-201ENST00000390466 AGLP35573 1532 aa4.16□□□□□ -1.74
TRAV39-201ENST00000390466 NWD2Q9ULI1 1742 aa4.15□□□□□ -1.74
TRAV39-201ENST00000390466 CHD4Q14839 1912 aa4.15□□□□□ -1.74
TRAV39-201ENST00000390466 COL22A1Q8NFW1 1626 aaPredicted RBP4.15□□□□□ -1.74
TRAV39-201ENST00000390466 PHRF1Q9P1Y6 1649 aaKnown RBP4.15□□□□□ -1.74
TRAV39-201ENST00000390466 CHL1O00533 1208 aa4.15□□□□□ -1.75
TRAV39-201ENST00000390466 PITPNM1O00562 1244 aa4.15□□□□□ -1.75
TRAV39-201ENST00000390466 VGFO15240 615 aaPredicted RBP4.15□□□□□ -1.75
TRAV39-201ENST00000390466 F13A1P00488 732 aa4.15□□□□□ -1.75
TRAV39-201ENST00000390466 PTMAP06454 111 aaKnown RBP4.15□□□□□ -1.75
TRAV39-201ENST00000390466 ZSCAN22P10073 491 aaPredicted RBP4.15□□□□□ -1.75
TRAV39-201ENST00000390466 H2AFXP16104 143 aaPredicted RBP4.15□□□□□ -1.75
TRAV39-201ENST00000390466 CDC25BP30305 580 aa4.15□□□□□ -1.75
TRAV39-201ENST00000390466 ZNF75DP51815 510 aa4.15□□□□□ -1.75
TRAV39-201ENST00000390466 RBM6P78332 1123 aaKnown RBP4.15□□□□□ -1.75
TRAV39-201ENST00000390466 LRMPQ12912 555 aa4.15□□□□□ -1.75
TRAV39-201ENST00000390466 KMT5BQ4FZB7 885 aa4.15□□□□□ -1.75
TRAV39-201ENST00000390466 FOXD4L5Q5VV16 416 aaPredicted RBP4.15□□□□□ -1.75
TRAV39-201ENST00000390466 RUFY3Q7L099 469 aa4.15□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms