RNA–Protein interactions for RNA: ENST00000389138.7

ERCC4-202, Transcript of ERCC excision repair 4, endonuclease catalytic subunit, humanhuman

TSL 2

Gene ERCC4, Length 2,106 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4-202ENST00000389138 G3BP2Q9UN86 482 aaKnown RBP7.55□□□□□ -1.2
ERCC4-202ENST00000389138 TCOF1Q13428 1488 aaKnown RBP7.55□□□□□ -1.2
ERCC4-202ENST00000389138 CEP170BQ9Y4F5 1589 aaPredicted RBP7.54□□□□□ -1.2
ERCC4-202ENST00000389138 EIF3JO75822 258 aaKnown RBP7.54□□□□□ -1.2
ERCC4-202ENST00000389138 ATP6V1AP38606 617 aa7.54□□□□□ -1.2
ERCC4-202ENST00000389138 TSHZ1Q6ZSZ6 1077 aa7.54□□□□□ -1.2
ERCC4-202ENST00000389138 TBC1D9Q6ZT07 1266 aa7.54□□□□□ -1.2
ERCC4-202ENST00000389138 METTL16Q86W50 562 aaKnown RBP7.54□□□□□ -1.2
ERCC4-202ENST00000389138 SPIRE2Q8WWL2 714 aa7.54□□□□□ -1.2
ERCC4-202ENST00000389138 ZNF518AQ6AHZ1 1483 aa7.54□□□□□ -1.2
ERCC4-202ENST00000389138 CPS1P31327 1500 aa7.54□□□□□ -1.2
ERCC4-202ENST00000389138 NPATQ14207 1427 aa7.54□□□□□ -1.2
ERCC4-202ENST00000389138 GJA5P36382 358 aa7.54□□□□□ -1.2
ERCC4-202ENST00000389138 HSP90AB2PQ58FF8 381 aa7.54□□□□□ -1.2
ERCC4-202ENST00000389138 KANK4Q5T7N3 995 aaPredicted RBP7.54□□□□□ -1.2
ERCC4-202ENST00000389138 ZSWIM4Q9H7M6 989 aa7.54□□□□□ -1.2
ERCC4-202ENST00000389138 PRR12Q9ULL5 1215 aa7.54□□□□□ -1.2
ERCC4-202ENST00000389138 MRPL58Q14197 206 aaKnown RBP7.53□□□□□ -1.2
ERCC4-202ENST00000389138 PLEKHG6Q3KR16 790 aa7.53□□□□□ -1.2
ERCC4-202ENST00000389138 NT5DC4Q86YG4 428 aa7.53□□□□□ -1.2
ERCC4-202ENST00000389138 MTA3Q9BTC8 594 aa7.53□□□□□ -1.2
ERCC4-202ENST00000389138 PRM3Q9NNZ6 103 aa7.53□□□□□ -1.2
ERCC4-202ENST00000389138 PCDHB3Q9Y5E6 796 aa7.53□□□□□ -1.2
ERCC4-202ENST00000389138 PLCH2O75038 1416 aa7.53□□□□□ -1.2
ERCC4-202ENST00000389138 PIP4K2BP78356 416 aa7.52□□□□□ -1.2
ERCC4-202ENST00000389138 CCDC146Q8IYE0 955 aa7.52□□□□□ -1.2
ERCC4-202ENST00000389138 PMFBP1Q8TBY8 1022 aa7.52□□□□□ -1.2
ERCC4-202ENST00000389138 CLTCQ00610 1675 aaKnown RBP7.52□□□□□ -1.21
ERCC4-202ENST00000389138 CNTLNQ9NXG0 1405 aa7.52□□□□□ -1.21
ERCC4-202ENST00000389138 PRXQ9BXM0 1461 aa7.52□□□□□ -1.21
ERCC4-202ENST00000389138 SCAMP3O14828 347 aaKnown RBP7.52□□□□□ -1.21
ERCC4-202ENST00000389138 ATP2B1P20020 1258 aa7.52□□□□□ -1.21
ERCC4-202ENST00000389138 QPCTQ16769 361 aa7.52□□□□□ -1.21
ERCC4-202ENST00000389138 C4orf46Q504U0 113 aa7.52□□□□□ -1.21
ERCC4-202ENST00000389138 KRBA2Q6ZNG9 492 aa7.52□□□□□ -1.21
ERCC4-202ENST00000389138 COL4A3BPQ9Y5P4 624 aa7.52□□□□□ -1.21
ERCC4-202ENST00000389138 HOXA2O43364 376 aa7.51□□□□□ -1.21
ERCC4-202ENST00000389138 NR1I2O75469 434 aa7.51□□□□□ -1.21
ERCC4-202ENST00000389138 IBSPP21815 317 aaPredicted RBP7.51□□□□□ -1.21
ERCC4-202ENST00000389138 TBX4P57082 545 aa7.51□□□□□ -1.21
ERCC4-202ENST00000389138 FUT2Q10981 343 aa7.51□□□□□ -1.21
ERCC4-202ENST00000389138 ELOAQ14241 798 aaKnown RBP7.51□□□□□ -1.21
ERCC4-202ENST00000389138 BMS1Q14692 1282 aaKnown RBP7.51□□□□□ -1.21
ERCC4-202ENST00000389138 C11orf96Q7Z7L8 435 aa7.51□□□□□ -1.21
ERCC4-202ENST00000389138 PCDH12Q9NPG4 1184 aa7.51□□□□□ -1.21
ERCC4-202ENST00000389138 MRPL42Q9Y6G3 142 aaKnown RBP7.51□□□□□ -1.21
ERCC4-202ENST00000389138 CLIP1P30622 1438 aa7.51□□□□□ -1.21
ERCC4-202ENST00000389138 ITSN2Q9NZM3 1697 aa7.51□□□□□ -1.21
ERCC4-202ENST00000389138 WASHC4Q2M389 1173 aa7.51□□□□□ -1.21
ERCC4-202ENST00000389138 TUSC1Q2TAM9 212 aa7.51□□□□□ -1.21
ERCC4-202ENST00000389138 ZNF746Q6NUN9 644 aaPredicted RBP7.51□□□□□ -1.21
ERCC4-202ENST00000389138 KCNG1Q9UIX4 513 aa7.51□□□□□ -1.21
ERCC4-202ENST00000389138 NEURL4Q96JN8 1562 aa7.5□□□□□ -1.21
ERCC4-202ENST00000389138 KIDINS220Q9ULH0 1771 aa7.5□□□□□ -1.21
ERCC4-202ENST00000389138 TOM1O60784 492 aa7.5□□□□□ -1.21
ERCC4-202ENST00000389138 AP1G2O75843 785 aa7.5□□□□□ -1.21
ERCC4-202ENST00000389138 MORN1Q5T089 497 aa7.5□□□□□ -1.21
ERCC4-202ENST00000389138 IFT57Q9NWB7 429 aa7.5□□□□□ -1.21
ERCC4-202ENST00000389138 RNF17Q9BXT8 1623 aaKnown RBP7.5□□□□□ -1.21
ERCC4-202ENST00000389138 CDC42BPBQ9Y5S2 1711 aa7.49□□□□□ -1.21
ERCC4-202ENST00000389138 SPTLC1O15269 473 aa7.49□□□□□ -1.21
ERCC4-202ENST00000389138 USP17L8P0C7I0 530 aa7.49□□□□□ -1.21
ERCC4-202ENST00000389138 TNNI2P48788 182 aa7.49□□□□□ -1.21
ERCC4-202ENST00000389138 RHBDL3P58872 404 aa7.49□□□□□ -1.21
ERCC4-202ENST00000389138 Q3C1V9 767 aa7.49□□□□□ -1.21
ERCC4-202ENST00000389138 BRINP2Q9C0B6 783 aa7.49□□□□□ -1.21
ERCC4-202ENST00000389138 IL21Q9HBE4 155 aa7.49□□□□□ -1.21
ERCC4-202ENST00000389138 GNL3LQ9NVN8 582 aaKnown RBP7.49□□□□□ -1.21
ERCC4-202ENST00000389138 KIF14Q15058 1648 aa7.49□□□□□ -1.21
ERCC4-202ENST00000389138 PTPRKQ15262 1439 aa7.49□□□□□ -1.21
ERCC4-202ENST00000389138 EVA1CP58658 441 aa7.49□□□□□ -1.21
ERCC4-202ENST00000389138 RBL2Q08999 1139 aa7.49□□□□□ -1.21
ERCC4-202ENST00000389138 RIC3Q7Z5B4 369 aa7.49□□□□□ -1.21
ERCC4-202ENST00000389138 HMX1Q9NP08 348 aaPredicted RBP7.49□□□□□ -1.21
ERCC4-202ENST00000389138 RGS17Q9UGC6 210 aaPredicted RBP7.49□□□□□ -1.21
ERCC4-202ENST00000389138 DNMT1P26358 1616 aaKnown RBP7.49□□□□□ -1.21
ERCC4-202ENST00000389138 VWDEQ8N2E2 1590 aa7.48□□□□□ -1.21
ERCC4-202ENST00000389138 CDK13Q14004 1512 aaKnown RBP7.48□□□□□ -1.21
ERCC4-202ENST00000389138 MLH3Q9UHC1 1453 aa7.48□□□□□ -1.21
ERCC4-202ENST00000389138 SHANK2Q9UPX8 1470 aa7.48□□□□□ -1.21
ERCC4-202ENST00000389138 KIF4AO95239 1232 aa7.48□□□□□ -1.21
ERCC4-202ENST00000389138 NOVA2Q9UNW9 492 aaKnown RBP7.48□□□□□ -1.21
ERCC4-202ENST00000389138 SALL2Q9Y467 1007 aaPredicted RBP7.48□□□□□ -1.21
ERCC4-202ENST00000389138 NDUFB9Q9Y6M9 179 aa7.48□□□□□ -1.21
ERCC4-202ENST00000389138 STRCP1A6NGW2 1772 aa7.48□□□□□ -1.21
ERCC4-202ENST00000389138 MOXD2PA6NHM9 499 aa7.48□□□□□ -1.21
ERCC4-202ENST00000389138 RSBN1LQ6PCB5 846 aaPredicted RBP7.48□□□□□ -1.21
ERCC4-202ENST00000389138 RPS6KC1Q96S38 1066 aa7.48□□□□□ -1.21
ERCC4-202ENST00000389138 ESF1Q9H501 851 aaKnown RBP7.48□□□□□ -1.21
ERCC4-202ENST00000389138 SYNMO15061 1565 aa7.48□□□□□ -1.21
ERCC4-202ENST00000389138 FDX1P10109 184 aa7.47□□□□□ -1.21
ERCC4-202ENST00000389138 CSPP1Q1MSJ5 1256 aa7.47□□□□□ -1.21
ERCC4-202ENST00000389138 BLOC1S3Q6QNY0 202 aa7.47□□□□□ -1.21
ERCC4-202ENST00000389138 FMNL3Q8IVF7 1028 aa7.47□□□□□ -1.21
ERCC4-202ENST00000389138 MTRQ99707 1265 aa7.47□□□□□ -1.21
ERCC4-202ENST00000389138 ARHGAP5Q13017 1502 aa7.47□□□□□ -1.21
ERCC4-202ENST00000389138 ITGBL1O95965 494 aaPredicted RBP7.46□□□□□ -1.21
ERCC4-202ENST00000389138 BIRC2Q13490 618 aa7.46□□□□□ -1.21
ERCC4-202ENST00000389138 PPP1R18Q6NYC8 613 aa7.46□□□□□ -1.21
ERCC4-202ENST00000389138 FILIP1Q7Z7B0 1213 aa7.46□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms