RNA–Protein interactions for RNA: ENST00000383018.7

SNRNP25-202, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 25, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SNRNP25, Length 1,085 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP25-202ENST00000383018 TEX13AQ9BXU3 409 aaPredicted RBP27.74■■■□□ 2.03
SNRNP25-202ENST00000383018 TRIM35Q9UPQ4 493 aa27.74■■■□□ 2.03
SNRNP25-202ENST00000383018 ZBTB1Q9Y2K1 713 aa27.74■■■□□ 2.03
SNRNP25-202ENST00000383018 RRP7AQ9Y3A4 280 aaKnown RBP27.74■■■□□ 2.03
SNRNP25-202ENST00000383018 PNISRQ8TF01 805 aaKnown RBP27.73■■■□□ 2.03
SNRNP25-202ENST00000383018 STARD3NLO95772 234 aa27.72■■■□□ 2.03
SNRNP25-202ENST00000383018 PRAMEF22A3QJZ6 481 aa27.71■■■□□ 2.03
SNRNP25-202ENST00000383018 GYS1P13807 737 aa27.71■■■□□ 2.03
SNRNP25-202ENST00000383018 USP16Q9Y5T5 823 aa27.71■■■□□ 2.03
SNRNP25-202ENST00000383018 RFC4P35249 363 aa27.7■■■□□ 2.02
SNRNP25-202ENST00000383018 EIF5P55010 431 aaKnown RBP27.69■■■□□ 2.02
SNRNP25-202ENST00000383018 LMOD3Q0VAK6 560 aa27.69■■■□□ 2.02
SNRNP25-202ENST00000383018 USP42Q9H9J4 1324 aaKnown RBP27.68■■■□□ 2.02
SNRNP25-202ENST00000383018 SNRPA1P09661 255 aaKnown RBP27.68■■■□□ 2.02
SNRNP25-202ENST00000383018 NEUROD2Q15784 382 aa27.68■■■□□ 2.02
SNRNP25-202ENST00000383018 SRP68Q9UHB9 627 aaKnown RBP27.68■■■□□ 2.02
SNRNP25-202ENST00000383018 A1BGP04217 495 aa27.67■■■□□ 2.02
SNRNP25-202ENST00000383018 EIF4A1P60842 406 aaKnown RBP27.67■■■□□ 2.02
SNRNP25-202ENST00000383018 NLGN1Q8N2Q7 840 aa27.67■■■□□ 2.02
SNRNP25-202ENST00000383018 APAF1O14727 1248 aa27.66■■■□□ 2.02
SNRNP25-202ENST00000383018 MRS2Q9HD23 443 aa27.66■■■□□ 2.02
SNRNP25-202ENST00000383018 BABAM1Q9NWV8 329 aa27.66■■■□□ 2.02
SNRNP25-202ENST00000383018 COL15A1P39059 1388 aa27.65■■■□□ 2.02
SNRNP25-202ENST00000383018 CANXP27824 592 aaKnown RBP27.65■■■□□ 2.02
SNRNP25-202ENST00000383018 GIGYF1O75420 1035 aaPredicted RBP27.63■■■□□ 2.01
SNRNP25-202ENST00000383018 MMP10P09238 476 aa27.63■■■□□ 2.01
SNRNP25-202ENST00000383018 NARFQ9UHQ1 456 aa27.63■■■□□ 2.01
SNRNP25-202ENST00000383018 IL6STP40189 918 aaPredicted RBP27.62■■■□□ 2.01
SNRNP25-202ENST00000383018 FKBP8Q14318 412 aa27.62■■■□□ 2.01
SNRNP25-202ENST00000383018 BCL2L12Q9HB09 334 aa27.62■■■□□ 2.01
SNRNP25-202ENST00000383018 CHL1O00533 1208 aa27.61■■■□□ 2.01
SNRNP25-202ENST00000383018 USPL1Q5W0Q7 1092 aa27.61■■■□□ 2.01
SNRNP25-202ENST00000383018 TSPYL4Q9UJ04 414 aa27.6■■■□□ 2.01
SNRNP25-202ENST00000383018 CD2APQ9Y5K6 639 aa27.6■■■□□ 2.01
SNRNP25-202ENST00000383018 LAMB4A4D0S4 1761 aa27.6■■■□□ 2.01
SNRNP25-202ENST00000383018 NBPF26B4DH59 902 aa27.59■■■□□ 2.01
SNRNP25-202ENST00000383018 TM4SF1P30408 202 aa27.59■■■□□ 2.01
SNRNP25-202ENST00000383018 NBPF10Q6P3W6 841 aaKnown RBP27.59■■■□□ 2.01
SNRNP25-202ENST00000383018 NBPF15Q8N660 670 aa27.59■■■□□ 2.01
SNRNP25-202ENST00000383018 NLGN2Q8NFZ4 835 aa27.59■■■□□ 2.01
SNRNP25-202ENST00000383018 ZPR1O75312 459 aa27.58■■■□□ 2.01
SNRNP25-202ENST00000383018 A0A087WZG4 1122 aa27.57■■■□□ 2
SNRNP25-202ENST00000383018 KIF13BQ9NQT8 1826 aa27.56■■■□□ 2
SNRNP25-202ENST00000383018 PIP4K2AP48426 406 aaPredicted RBP27.56■■■□□ 2
SNRNP25-202ENST00000383018 DDR1Q08345 913 aa27.56■■■□□ 2
SNRNP25-202ENST00000383018 ZNF853P0CG23 659 aa27.55■■■□□ 2
SNRNP25-202ENST00000383018 KLHL34Q8N239 644 aa27.55■■■□□ 2
SNRNP25-202ENST00000383018 TBC1D2BQ9UPU7 963 aa27.54■■■□□ 2
SNRNP25-202ENST00000383018 CFAP44Q96MT7 982 aa27.53■■■□□ 2
SNRNP25-202ENST00000383018 POLRMTO00411 1230 aaKnown RBP27.52■■■□□ 2
SNRNP25-202ENST00000383018 CAMTA2O94983 1202 aa27.52■■■□□ 2
SNRNP25-202ENST00000383018 NFIXQ14938 502 aa27.52■■■□□ 2
SNRNP25-202ENST00000383018 NCBP3Q53F19 620 aaKnown RBP27.52■■■□□ 2
SNRNP25-202ENST00000383018 SCN7AQ01118 1682 aa27.52■■■□□ 2
SNRNP25-202ENST00000383018 PARP3Q9Y6F1 533 aa27.51■■□□□ 1.99
SNRNP25-202ENST00000383018 C10orf71Q711Q0 1435 aa27.5■■□□□ 1.99
SNRNP25-202ENST00000383018 KIAA1551Q9HCM1 1747 aa27.5■■□□□ 1.99
SNRNP25-202ENST00000383018 CCDC27Q2M243 656 aa27.5■■□□□ 1.99
SNRNP25-202ENST00000383018 BCORQ6W2J9 1755 aa27.5■■□□□ 1.99
SNRNP25-202ENST00000383018 KRT24Q2M2I5 525 aa27.49■■□□□ 1.99
SNRNP25-202ENST00000383018 ZNF330Q9Y3S2 320 aaPredicted RBP27.49■■□□□ 1.99
SNRNP25-202ENST00000383018 NRXN2Q9P2S2 1712 aa27.49■■□□□ 1.99
SNRNP25-202ENST00000383018 AFDNP55196 1824 aaKnown RBP27.48■■□□□ 1.99
SNRNP25-202ENST00000383018 DZIP3Q86Y13 1208 aaKnown RBP27.48■■□□□ 1.99
SNRNP25-202ENST00000383018 LAS1LQ9Y4W2 734 aaKnown RBP27.48■■□□□ 1.99
SNRNP25-202ENST00000383018 PDIA6Q15084 440 aa27.47■■□□□ 1.99
SNRNP25-202ENST00000383018 LRP10Q7Z4F1 713 aa27.47■■□□□ 1.99
SNRNP25-202ENST00000383018 MBIPQ9NS73 344 aa27.47■■□□□ 1.99
SNRNP25-202ENST00000383018 IFT57Q9NWB7 429 aa27.47■■□□□ 1.99
SNRNP25-202ENST00000383018 SENP3-EIF4A1A0A087X0R7 540 aa27.46■■□□□ 1.99
SNRNP25-202ENST00000383018 TBC1D9BQ66K14 1250 aa27.46■■□□□ 1.99
SNRNP25-202ENST00000383018 ERBB4Q15303 1308 aa27.45■■□□□ 1.99
SNRNP25-202ENST00000383018 WWC1Q8IX03 1113 aa27.45■■□□□ 1.98
SNRNP25-202ENST00000383018 RGL2O15211 777 aa27.44■■□□□ 1.98
SNRNP25-202ENST00000383018 CALD1Q05682 793 aaKnown RBP27.44■■□□□ 1.98
SNRNP25-202ENST00000383018 PXDNLA1KZ92 1463 aa27.44■■□□□ 1.98
SNRNP25-202ENST00000383018 TGFB2P61812 414 aa27.43■■□□□ 1.98
SNRNP25-202ENST00000383018 GNAI1P63096 354 aa27.43■■□□□ 1.98
SNRNP25-202ENST00000383018 FAM9BQ8IZU0 186 aa27.43■■□□□ 1.98
SNRNP25-202ENST00000383018 SERPINB2P05120 415 aa27.42■■□□□ 1.98
SNRNP25-202ENST00000383018 CLEC4GQ6UXB4 293 aa27.42■■□□□ 1.98
SNRNP25-202ENST00000383018 NPM2Q86SE8 214 aaKnown RBP27.42■■□□□ 1.98
SNRNP25-202ENST00000383018 UTRNP46939 3433 aa27.42■■□□□ 1.98
SNRNP25-202ENST00000383018 N4BP2Q86UW6 1770 aaPredicted RBP27.41■■□□□ 1.98
SNRNP25-202ENST00000383018 DCAF8L1A6NGE4 600 aa27.41■■□□□ 1.98
SNRNP25-202ENST00000383018 YBX3P16989 372 aaKnown RBP eCLIP27.41■■□□□ 1.988e-7■□□□□ 9.9
SNRNP25-202ENST00000383018 EIF2S2P20042 333 aaKnown RBP27.41■■□□□ 1.98
SNRNP25-202ENST00000383018 HOXB7P09629 217 aa27.4■■□□□ 1.98
SNRNP25-202ENST00000383018 PROSER3Q2NL68 480 aa27.4■■□□□ 1.98
SNRNP25-202ENST00000383018 BICDL1Q6ZP65 573 aa27.4■■□□□ 1.98
SNRNP25-202ENST00000383018 GOLGB1Q14789 3259 aaKnown RBP27.39■■□□□ 1.98
SNRNP25-202ENST00000383018 MYL6BP14649 208 aa27.39■■□□□ 1.98
SNRNP25-202ENST00000383018 KCNA3P22001 575 aa27.39■■□□□ 1.98
SNRNP25-202ENST00000383018 TTLL7Q6ZT98 887 aa27.39■■□□□ 1.98
SNRNP25-202ENST00000383018 HLFQ16534 295 aa27.38■■□□□ 1.97
SNRNP25-202ENST00000383018 GPR162Q16538 588 aa27.38■■□□□ 1.97
SNRNP25-202ENST00000383018 BRCA1P38398 1863 aaKnown RBP27.38■■□□□ 1.97
SNRNP25-202ENST00000383018 A0A0G2JLW4 131 aa27.37■■□□□ 1.97
SNRNP25-202ENST00000383018 ERVV-1B6SEH8 477 aa27.37■■□□□ 1.97
SNRNP25-202ENST00000383018 DUSP27Q5VZP5 1158 aa27.37■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms