RNA–Protein interactions for RNA: ENST00000381897.5

RFC1-202, Transcript of replication factor C subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RFC1, Length 4,886 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-202ENST00000381897 MAP3K9P80192 1104 aa6.72□□□□□ -1.33
RFC1-202ENST00000381897 GAS2L3Q86XJ1 694 aa6.72□□□□□ -1.33
RFC1-202ENST00000381897 RASSF8Q8NHQ8 419 aa6.72□□□□□ -1.33
RFC1-202ENST00000381897 RBSNQ9H1K0 784 aa6.72□□□□□ -1.33
RFC1-202ENST00000381897 KIAA0586Q9BVV6 1533 aa6.72□□□□□ -1.33
RFC1-202ENST00000381897 EXOSC9Q06265 439 aaKnown RBP6.71□□□□□ -1.33
RFC1-202ENST00000381897 INF2Q27J81 1249 aa6.71□□□□□ -1.33
RFC1-202ENST00000381897 WWC2Q6AWC2 1192 aa6.71□□□□□ -1.33
RFC1-202ENST00000381897 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.71□□□□□ -1.33
RFC1-202ENST00000381897 ATAD2Q6PL18 1390 aa6.71□□□□□ -1.33
RFC1-202ENST00000381897 PPFIA3O75145 1194 aa6.71□□□□□ -1.34
RFC1-202ENST00000381897 IPO4Q8TEX9 1081 aaKnown RBP6.71□□□□□ -1.34
RFC1-202ENST00000381897 ZNHIT6Q9NWK9 470 aaKnown RBP6.71□□□□□ -1.34
RFC1-202ENST00000381897 TBC1D9Q6ZT07 1266 aa6.71□□□□□ -1.34
RFC1-202ENST00000381897 VRTNQ9H8Y1 702 aa6.71□□□□□ -1.34
RFC1-202ENST00000381897 IL16Q14005 1332 aa6.71□□□□□ -1.34
RFC1-202ENST00000381897 GOLIM4O00461 696 aa6.71□□□□□ -1.34
RFC1-202ENST00000381897 NEMFO60524 1076 aa6.71□□□□□ -1.34
RFC1-202ENST00000381897 ZRANB2O95218 330 aaKnown RBP eCLIP6.71□□□□□ -1.34
RFC1-202ENST00000381897 TCF3P15923 654 aa6.71□□□□□ -1.34
RFC1-202ENST00000381897 APBB1IPQ7Z5R6 666 aaPredicted RBP6.71□□□□□ -1.34
RFC1-202ENST00000381897 ADCY5O95622 1261 aa6.7□□□□□ -1.34
RFC1-202ENST00000381897 KCNJ4P48050 445 aa6.7□□□□□ -1.34
RFC1-202ENST00000381897 MDM2Q00987 491 aaPredicted RBP6.7□□□□□ -1.34
RFC1-202ENST00000381897 SPTY2D1Q68D10 685 aaPredicted RBP6.7□□□□□ -1.34
RFC1-202ENST00000381897 ZBTB12Q9Y330 459 aaPredicted RBP6.7□□□□□ -1.34
RFC1-202ENST00000381897 CLEC17AQ6ZS10 378 aa6.7□□□□□ -1.34
RFC1-202ENST00000381897 TESK2Q96S53 571 aa6.7□□□□□ -1.34
RFC1-202ENST00000381897 NEUROD4Q9HD90 331 aa6.7□□□□□ -1.34
RFC1-202ENST00000381897 GABBR1Q9UBS5 961 aa6.7□□□□□ -1.34
RFC1-202ENST00000381897 PLXNC1O60486 1568 aa6.7□□□□□ -1.34
RFC1-202ENST00000381897 NEK4P51957 841 aa6.7□□□□□ -1.34
RFC1-202ENST00000381897 GNAI1P63096 354 aa6.7□□□□□ -1.34
RFC1-202ENST00000381897 AGERQ15109 404 aa6.7□□□□□ -1.34
RFC1-202ENST00000381897 ZSCAN29Q8IWY8 852 aaPredicted RBP6.7□□□□□ -1.34
RFC1-202ENST00000381897 SMC3Q9UQE7 1217 aa6.7□□□□□ -1.34
RFC1-202ENST00000381897 MRVI1Q9Y6F6 885 aa6.7□□□□□ -1.34
RFC1-202ENST00000381897 GIGYF1O75420 1035 aaPredicted RBP6.7□□□□□ -1.34
RFC1-202ENST00000381897 TPM1P09493 284 aa6.7□□□□□ -1.34
RFC1-202ENST00000381897 ATF3P18847 181 aa6.7□□□□□ -1.34
RFC1-202ENST00000381897 TMEM57Q8N5G2 664 aa6.7□□□□□ -1.34
RFC1-202ENST00000381897 GAS2L2Q8NHY3 880 aa6.7□□□□□ -1.34
RFC1-202ENST00000381897 PRDM4Q9UKN5 801 aa6.7□□□□□ -1.34
RFC1-202ENST00000381897 SMTNL1A8MU46 457 aa6.69□□□□□ -1.34
RFC1-202ENST00000381897 IRX3P78415 501 aaPredicted RBP6.69□□□□□ -1.34
RFC1-202ENST00000381897 CTR9Q6PD62 1173 aa6.69□□□□□ -1.34
RFC1-202ENST00000381897 PPCSQ9HAB8 311 aa6.69□□□□□ -1.34
RFC1-202ENST00000381897 TERF2IPQ9NYB0 399 aa6.69□□□□□ -1.34
RFC1-202ENST00000381897 SYNMO15061 1565 aa6.69□□□□□ -1.34
RFC1-202ENST00000381897 BECN2A8MW95 431 aa6.69□□□□□ -1.34
RFC1-202ENST00000381897 SYCP1Q15431 976 aa6.69□□□□□ -1.34
RFC1-202ENST00000381897 NAALADL2Q58DX5 795 aa6.69□□□□□ -1.34
RFC1-202ENST00000381897 LMBRD1Q9NUN5 540 aa6.69□□□□□ -1.34
RFC1-202ENST00000381897 USP25Q9UHP3 1055 aa6.69□□□□□ -1.34
RFC1-202ENST00000381897 TMCO5BA8MYB1 307 aa6.69□□□□□ -1.34
RFC1-202ENST00000381897 RAB15P59190 212 aa6.69□□□□□ -1.34
RFC1-202ENST00000381897 PDLIM2Q96JY6 352 aa6.69□□□□□ -1.34
RFC1-202ENST00000381897 TRIM5Q9C035 493 aa6.69□□□□□ -1.34
RFC1-202ENST00000381897 ARIH1Q9Y4X5 557 aaPredicted RBP6.69□□□□□ -1.34
RFC1-202ENST00000381897 EVC2Q86UK5 1308 aa6.69□□□□□ -1.34
RFC1-202ENST00000381897 NSD2O96028 1365 aa6.69□□□□□ -1.34
RFC1-202ENST00000381897 TRIM27P14373 513 aa6.68□□□□□ -1.34
RFC1-202ENST00000381897 LARP1Q6PKG0 1096 aaKnown RBP6.68□□□□□ -1.34
RFC1-202ENST00000381897 FILIP1Q7Z7B0 1213 aa6.68□□□□□ -1.34
RFC1-202ENST00000381897 UIMC1Q96RL1 719 aa6.68□□□□□ -1.34
RFC1-202ENST00000381897 SPINK5Q9NQ38 1064 aaPredicted RBP6.68□□□□□ -1.34
RFC1-202ENST00000381897 LRRIQ1Q96JM4 1722 aa6.68□□□□□ -1.34
RFC1-202ENST00000381897 CLUL1Q15846 466 aa6.68□□□□□ -1.34
RFC1-202ENST00000381897 TXLNBQ8N3L3 684 aa6.68□□□□□ -1.34
RFC1-202ENST00000381897 MNS1Q8NEH6 495 aa6.68□□□□□ -1.34
RFC1-202ENST00000381897 ZNF397Q8NF99 534 aaPredicted RBP6.68□□□□□ -1.34
RFC1-202ENST00000381897 SUDS3Q9H7L9 328 aaPredicted RBP6.68□□□□□ -1.34
RFC1-202ENST00000381897 SEPT11Q9NVA2 429 aaKnown RBP6.68□□□□□ -1.34
RFC1-202ENST00000381897 RABGAP1Q9Y3P9 1069 aa6.68□□□□□ -1.34
RFC1-202ENST00000381897 EIF4G3O43432 1585 aaKnown RBP6.68□□□□□ -1.34
RFC1-202ENST00000381897 CCDC171Q6TFL3 1326 aa6.68□□□□□ -1.34
RFC1-202ENST00000381897 RAPGEF6Q8TEU7 1601 aa6.68□□□□□ -1.34
RFC1-202ENST00000381897 FAM135AQ9P2D6 1515 aa6.68□□□□□ -1.34
RFC1-202ENST00000381897 GPATCH8Q9UKJ3 1502 aaKnown RBP6.68□□□□□ -1.34
RFC1-202ENST00000381897 ATL2Q8NHH9 583 aa6.68□□□□□ -1.34
RFC1-202ENST00000381897 ATRIPQ8WXE1 791 aa6.68□□□□□ -1.34
RFC1-202ENST00000381897 CCT6BQ92526 530 aa6.68□□□□□ -1.34
RFC1-202ENST00000381897 ACBD3Q9H3P7 528 aa6.68□□□□□ -1.34
RFC1-202ENST00000381897 U3KPZ7 1027 aaPredicted RBP6.68□□□□□ -1.34
RFC1-202ENST00000381897 MTHFSP49914 203 aa6.68□□□□□ -1.34
RFC1-202ENST00000381897 MKNK1Q9BUB5 465 aa6.68□□□□□ -1.34
RFC1-202ENST00000381897 E9PCH4 1651 aa6.68□□□□□ -1.34
RFC1-202ENST00000381897 LEKR1Q6ZMV7 388 aa6.67□□□□□ -1.34
RFC1-202ENST00000381897 SPC24Q8NBT2 197 aa6.67□□□□□ -1.34
RFC1-202ENST00000381897 CHMP4CQ96CF2 233 aa6.67□□□□□ -1.34
RFC1-202ENST00000381897 NOL10Q9BSC4 688 aaKnown RBP6.67□□□□□ -1.34
RFC1-202ENST00000381897 INPP5FQ9Y2H2 1132 aa6.67□□□□□ -1.34
RFC1-202ENST00000381897 NCOA3Q9Y6Q9 1424 aa6.67□□□□□ -1.34
RFC1-202ENST00000381897 PRDM15P57071 1507 aaPredicted RBP6.67□□□□□ -1.34
RFC1-202ENST00000381897 CEP170Q5SW79 1584 aa6.67□□□□□ -1.34
RFC1-202ENST00000381897 VIRMAQ69YN4 1812 aaKnown RBP6.67□□□□□ -1.34
RFC1-202ENST00000381897 DIAPH1O60610 1272 aaKnown RBP6.67□□□□□ -1.34
RFC1-202ENST00000381897 CAVIN2O95810 425 aa6.67□□□□□ -1.34
RFC1-202ENST00000381897 TNNT1P13805 278 aa6.67□□□□□ -1.34
RFC1-202ENST00000381897 TDO2P48775 406 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms