RNA–Protein interactions for RNA: ENST00000380833.8

CLCN4-202, Transcript of chloride voltage-gated channel 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN4, Length 6,750 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-202ENST00000380833 WHAMMQ8TF30 809 aa12.46□□□□□ -0.42
CLCN4-202ENST00000380833 NACAP1Q9BZK3 213 aa12.46□□□□□ -0.42
CLCN4-202ENST00000380833 LUC7L2Q9Y383 392 aaKnown RBP12.46□□□□□ -0.42
CLCN4-202ENST00000380833 CWC27Q6UX04 472 aaKnown RBP12.46□□□□□ -0.42
CLCN4-202ENST00000380833 SYCE3A1L190 88 aa12.45□□□□□ -0.42
CLCN4-202ENST00000380833 MCM2P49736 904 aa12.45□□□□□ -0.42
CLCN4-202ENST00000380833 NUCKS1Q9H1E3 243 aaKnown RBP12.45□□□□□ -0.42
CLCN4-202ENST00000380833 UBAC1Q9BSL1 405 aa12.45□□□□□ -0.42
CLCN4-202ENST00000380833 RAD54L2Q9Y4B4 1467 aa12.45□□□□□ -0.42
CLCN4-202ENST00000380833 RLBP1P12271 317 aa12.45□□□□□ -0.42
CLCN4-202ENST00000380833 CFAP70Q5T0N1 1121 aa12.45□□□□□ -0.42
CLCN4-202ENST00000380833 CEP120Q8N960 986 aa12.45□□□□□ -0.42
CLCN4-202ENST00000380833 CDC45O75419 566 aa12.45□□□□□ -0.42
CLCN4-202ENST00000380833 TWISTNBQ3B726 338 aaPredicted RBP12.45□□□□□ -0.42
CLCN4-202ENST00000380833 CCDC114Q96M63 670 aa12.45□□□□□ -0.42
CLCN4-202ENST00000380833 IGHMBP2P38935 993 aaKnown RBP12.44□□□□□ -0.42
CLCN4-202ENST00000380833 NUTM1Q86Y26 1132 aa12.44□□□□□ -0.42
CLCN4-202ENST00000380833 AFAP1Q8N556 730 aa12.44□□□□□ -0.42
CLCN4-202ENST00000380833 ARFGAP3Q9NP61 516 aa12.44□□□□□ -0.42
CLCN4-202ENST00000380833 SPG7Q9UQ90 795 aa12.44□□□□□ -0.42
CLCN4-202ENST00000380833 NBPF8Q3BBV2 869 aa12.44□□□□□ -0.42
CLCN4-202ENST00000380833 HS1BP3Q53T59 392 aa12.44□□□□□ -0.42
CLCN4-202ENST00000380833 TRIM22Q8IYM9 498 aa12.44□□□□□ -0.42
CLCN4-202ENST00000380833 CCDC113Q9H0I3 377 aa12.44□□□□□ -0.42
CLCN4-202ENST00000380833 SERPINA10Q9UK55 444 aa12.44□□□□□ -0.42
CLCN4-202ENST00000380833 ANAPC15P60006 121 aa12.44□□□□□ -0.42
CLCN4-202ENST00000380833 LUC7LQ9NQ29 371 aaKnown RBP12.44□□□□□ -0.42
CLCN4-202ENST00000380833 CABP1Q9NZU7 370 aa12.44□□□□□ -0.42
CLCN4-202ENST00000380833 SPTY2D1Q68D10 685 aaPredicted RBP12.44□□□□□ -0.42
CLCN4-202ENST00000380833 ZNF365Q70YC5 407 aa12.44□□□□□ -0.42
CLCN4-202ENST00000380833 SECISBP2LQ93073 1101 aaKnown RBP12.44□□□□□ -0.42
CLCN4-202ENST00000380833 VAT1LQ9HCJ6 419 aa12.44□□□□□ -0.42
CLCN4-202ENST00000380833 GPTP24298 496 aa12.43□□□□□ -0.42
CLCN4-202ENST00000380833 NOLC1Q14978 699 aaKnown RBP eCLIP12.43□□□□□ -0.42
CLCN4-202ENST00000380833 DDX27Q96GQ7 796 aaKnown RBP12.43□□□□□ -0.42
CLCN4-202ENST00000380833 CDK19Q9BWU1 502 aa12.43□□□□□ -0.42
CLCN4-202ENST00000380833 K7ELQ4 463 aaPredicted RBP12.43□□□□□ -0.42
CLCN4-202ENST00000380833 FBF1Q8TES7 1133 aa12.43□□□□□ -0.42
CLCN4-202ENST00000380833 KIF1CO43896 1103 aaKnown RBP12.43□□□□□ -0.42
CLCN4-202ENST00000380833 HMGB2P26583 209 aaKnown RBP12.43□□□□□ -0.42
CLCN4-202ENST00000380833 PIP4K2AP48426 406 aaPredicted RBP12.43□□□□□ -0.42
CLCN4-202ENST00000380833 MMRN2Q9H8L6 949 aa12.43□□□□□ -0.42
CLCN4-202ENST00000380833 CC2D2AQ9P2K1 1620 aa12.43□□□□□ -0.42
CLCN4-202ENST00000380833 CCDC88BA6NC98 1476 aa12.43□□□□□ -0.42
CLCN4-202ENST00000380833 GCOM1H8Y6P7 765 aaPredicted RBP12.43□□□□□ -0.42
CLCN4-202ENST00000380833 MYZAPP0CAP1 466 aa12.43□□□□□ -0.42
CLCN4-202ENST00000380833 ZNF354CQ86Y25 554 aa12.43□□□□□ -0.42
CLCN4-202ENST00000380833 CTNNBL1Q8WYA6 563 aaPredicted RBP12.43□□□□□ -0.42
CLCN4-202ENST00000380833 C6orf229H3BNL8 230 aa12.43□□□□□ -0.42
CLCN4-202ENST00000380833 STAMBPO95630 424 aa12.43□□□□□ -0.42
CLCN4-202ENST00000380833 METTL24Q5JXM2 366 aa12.43□□□□□ -0.42
CLCN4-202ENST00000380833 GAS2L2Q8NHY3 880 aa12.43□□□□□ -0.42
CLCN4-202ENST00000380833 F8W031 263 aaPredicted RBP12.42□□□□□ -0.42
CLCN4-202ENST00000380833 BUB1BO60566 1050 aaPredicted RBP12.42□□□□□ -0.42
CLCN4-202ENST00000380833 NOL3O60936 208 aaKnown RBP12.42□□□□□ -0.42
CLCN4-202ENST00000380833 ATP2C2O75185 946 aa12.42□□□□□ -0.42
CLCN4-202ENST00000380833 WDHD1O75717 1129 aaPredicted RBP12.42□□□□□ -0.42
CLCN4-202ENST00000380833 XRCC6P12956 609 aaKnown RBP eCLIP12.42□□□□□ -0.42
CLCN4-202ENST00000380833 CCDC171Q6TFL3 1326 aa12.42□□□□□ -0.42
CLCN4-202ENST00000380833 CDCA7LQ96GN5 454 aa12.42□□□□□ -0.42
CLCN4-202ENST00000380833 MKNK2Q9HBH9 465 aa12.42□□□□□ -0.42
CLCN4-202ENST00000380833 MROH2BQ7Z745 1585 aa12.42□□□□□ -0.42
CLCN4-202ENST00000380833 KIF5CO60282 957 aa12.42□□□□□ -0.42
CLCN4-202ENST00000380833 RRAGDQ9NQL2 400 aaPredicted RBP12.42□□□□□ -0.42
CLCN4-202ENST00000380833 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.42□□□□□ -0.42
CLCN4-202ENST00000380833 BIRC2Q13490 618 aa12.42□□□□□ -0.42
CLCN4-202ENST00000380833 CCDC92Q53HC0 331 aaPredicted RBP12.42□□□□□ -0.42
CLCN4-202ENST00000380833 GUCY1B3Q02153 619 aa12.42□□□□□ -0.42
CLCN4-202ENST00000380833 ARHGAP29Q52LW3 1261 aa12.42□□□□□ -0.42
CLCN4-202ENST00000380833 PPFIBP2Q8ND30 876 aa12.42□□□□□ -0.42
CLCN4-202ENST00000380833 VCXQ9H320 206 aa12.42□□□□□ -0.42
CLCN4-202ENST00000380833 RABGAP1Q9Y3P9 1069 aa12.42□□□□□ -0.42
CLCN4-202ENST00000380833 GNAI2P04899 355 aa12.42□□□□□ -0.42
CLCN4-202ENST00000380833 RBM26Q5T8P6 1007 aaKnown RBP12.42□□□□□ -0.42
CLCN4-202ENST00000380833 JARID2Q92833 1246 aaPredicted RBP12.42□□□□□ -0.42
CLCN4-202ENST00000380833 RPGRQ92834 1020 aaKnown RBP12.42□□□□□ -0.42
CLCN4-202ENST00000380833 ZKSCAN5Q9Y2L8 839 aa12.42□□□□□ -0.42
CLCN4-202ENST00000380833 LRRC23Q53EV4 343 aaPredicted RBP12.41□□□□□ -0.42
CLCN4-202ENST00000380833 CCDC144CPQ8IYA2 1237 aa12.41□□□□□ -0.42
CLCN4-202ENST00000380833 FAM114A2Q9NRY5 505 aa12.41□□□□□ -0.42
CLCN4-202ENST00000380833 ADAMTS8Q9UP79 889 aa12.41□□□□□ -0.42
CLCN4-202ENST00000380833 SFPQP23246 707 aaKnown RBP eCLIP12.41□□□□□ -0.42
CLCN4-202ENST00000380833 LARP6Q9BRS8 491 aaKnown RBP12.41□□□□□ -0.42
CLCN4-202ENST00000380833 VPS8Q8N3P4 1428 aa12.41□□□□□ -0.42
CLCN4-202ENST00000380833 RAB11FIP4Q86YS3 637 aa12.41□□□□□ -0.42
CLCN4-202ENST00000380833 VPS18Q9P253 973 aa12.41□□□□□ -0.42
CLCN4-202ENST00000380833 PFDN1O60925 122 aa12.4□□□□□ -0.42
CLCN4-202ENST00000380833 RFC1P35251 1148 aaPredicted RBP12.4□□□□□ -0.42
CLCN4-202ENST00000380833 ANKS4BQ8N8V4 417 aa12.4□□□□□ -0.42
CLCN4-202ENST00000380833 AIDAQ96BJ3 306 aa12.4□□□□□ -0.42
CLCN4-202ENST00000380833 NSRP1Q9H0G5 558 aaKnown RBP12.4□□□□□ -0.42
CLCN4-202ENST00000380833 DACH1Q9UI36 760 aa12.4□□□□□ -0.42
CLCN4-202ENST00000380833 C16orf71Q8IYS4 520 aaPredicted RBP12.4□□□□□ -0.42
CLCN4-202ENST00000380833 WDR33Q9C0J8 1336 aaKnown RBP12.4□□□□□ -0.42
CLCN4-202ENST00000380833 TOP2AP11388 1531 aaKnown RBP12.4□□□□□ -0.42
CLCN4-202ENST00000380833 SNW1Q13573 536 aaKnown RBP12.4□□□□□ -0.42
CLCN4-202ENST00000380833 CAMK4Q16566 473 aa12.4□□□□□ -0.42
CLCN4-202ENST00000380833 GOPCQ9HD26 462 aa12.4□□□□□ -0.42
CLCN4-202ENST00000380833 IFT140Q96RY7 1462 aa12.4□□□□□ -0.42
CLCN4-202ENST00000380833 IFFO1Q0D2I5 559 aa12.4□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms