RNA–Protein interactions for RNA: ENST00000377808.8

SMARCE1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,307 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-203ENST00000377808 NLGN1Q8N2Q7 840 aa15.3■□□□□ 0.04
SMARCE1-203ENST00000377808 PLEKHF1Q96S99 279 aa15.3■□□□□ 0.04
SMARCE1-203ENST00000377808 PRKRIP1Q9H875 184 aaPredicted RBP15.29■□□□□ 0.04
SMARCE1-203ENST00000377808 WWC3Q9ULE0 1092 aa15.29■□□□□ 0.04
SMARCE1-203ENST00000377808 CD2APQ9Y5K6 639 aa15.29■□□□□ 0.04
SMARCE1-203ENST00000377808 UTRNP46939 3433 aa15.29■□□□□ 0.04
SMARCE1-203ENST00000377808 SOS1Q07889 1333 aaPredicted RBP15.29■□□□□ 0.04
SMARCE1-203ENST00000377808 USP42Q9H9J4 1324 aaKnown RBP15.29■□□□□ 0.04
SMARCE1-203ENST00000377808 COL15A1P39059 1388 aa15.28■□□□□ 0.04
SMARCE1-203ENST00000377808 CCDC146Q8IYE0 955 aa15.28■□□□□ 0.04
SMARCE1-203ENST00000377808 PARP3Q9Y6F1 533 aa15.28■□□□□ 0.04
SMARCE1-203ENST00000377808 ZNF316A6NFI3 1004 aaPredicted RBP15.27■□□□□ 0.04
SMARCE1-203ENST00000377808 FKBP8Q14318 412 aa15.27■□□□□ 0.04
SMARCE1-203ENST00000377808 USPL1Q5W0Q7 1092 aa15.27■□□□□ 0.04
SMARCE1-203ENST00000377808 NPM2Q86SE8 214 aaKnown RBP15.27■□□□□ 0.04
SMARCE1-203ENST00000377808 THUMPD2Q9BTF0 503 aaKnown RBP15.27■□□□□ 0.04
SMARCE1-203ENST00000377808 TEX13AQ9BXU3 409 aaPredicted RBP15.27■□□□□ 0.04
SMARCE1-203ENST00000377808 MIS18AQ9NYP9 233 aa15.27■□□□□ 0.04
SMARCE1-203ENST00000377808 DLG5Q8TDM6 1919 aa15.26■□□□□ 0.03
SMARCE1-203ENST00000377808 TAF7Q15545 349 aaPredicted RBP15.26■□□□□ 0.03
SMARCE1-203ENST00000377808 RIPK4P57078 832 aa15.25■□□□□ 0.03
SMARCE1-203ENST00000377808 NEUROD2Q15784 382 aa15.25■□□□□ 0.03
SMARCE1-203ENST00000377808 RRP7AQ9Y3A4 280 aaKnown RBP15.25■□□□□ 0.03
SMARCE1-203ENST00000377808 PRAMEF22A3QJZ6 481 aa15.24■□□□□ 0.03
SMARCE1-203ENST00000377808 A1BGP04217 495 aa15.24■□□□□ 0.03
SMARCE1-203ENST00000377808 PNISRQ8TF01 805 aaKnown RBP15.24■□□□□ 0.03
SMARCE1-203ENST00000377808 A0A087WZG4 1122 aa15.23■□□□□ 0.03
SMARCE1-203ENST00000377808 SNRPA1P09661 255 aaKnown RBP15.23■□□□□ 0.03
SMARCE1-203ENST00000377808 PIP4K2AP48426 406 aaPredicted RBP15.23■□□□□ 0.03
SMARCE1-203ENST00000377808 NARFQ9UHQ1 456 aa15.23■□□□□ 0.03
SMARCE1-203ENST00000377808 USP16Q9Y5T5 823 aa15.23■□□□□ 0.03
SMARCE1-203ENST00000377808 YBX3P16989 372 aaKnown RBP eCLIP15.22■□□□□ 0.032e-7■■□□□ 12.5
SMARCE1-203ENST00000377808 LMOD3Q0VAK6 560 aa15.22■□□□□ 0.03
SMARCE1-203ENST00000377808 GOLGB1Q14789 3259 aaKnown RBP15.22■□□□□ 0.03
SMARCE1-203ENST00000377808 TMPOP42166 694 aaKnown RBP15.21■□□□□ 0.03
SMARCE1-203ENST00000377808 EIF5P55010 431 aaKnown RBP15.21■□□□□ 0.03
SMARCE1-203ENST00000377808 DDR1Q08345 913 aa15.21■□□□□ 0.03
SMARCE1-203ENST00000377808 BICDL1Q6ZP65 573 aa15.21■□□□□ 0.03
SMARCE1-203ENST00000377808 RUNDC1Q96C34 613 aa15.21■□□□□ 0.03
SMARCE1-203ENST00000377808 ADAMTS8Q9UP79 889 aa15.21■□□□□ 0.03
SMARCE1-203ENST00000377808 TBC1D2BQ9UPU7 963 aa15.21■□□□□ 0.03
SMARCE1-203ENST00000377808 C10orf71Q711Q0 1435 aa15.2■□□□□ 0.02
SMARCE1-203ENST00000377808 GRIN3BO60391 1043 aa15.2■□□□□ 0.02
SMARCE1-203ENST00000377808 IL6STP40189 918 aaPredicted RBP15.2■□□□□ 0.02
SMARCE1-203ENST00000377808 TSPYL4Q9UJ04 414 aa15.2■□□□□ 0.02
SMARCE1-203ENST00000377808 POLRMTO00411 1230 aaKnown RBP15.19■□□□□ 0.02
SMARCE1-203ENST00000377808 NFIXQ14938 502 aa15.19■□□□□ 0.02
SMARCE1-203ENST00000377808 PXDNLA1KZ92 1463 aa15.19■□□□□ 0.02
SMARCE1-203ENST00000377808 A0A0G2JLW4 131 aa15.18■□□□□ 0.02
SMARCE1-203ENST00000377808 ANP32CO43423 234 aa15.18■□□□□ 0.02
SMARCE1-203ENST00000377808 TGFB2P61812 414 aa15.18■□□□□ 0.02
SMARCE1-203ENST00000377808 DZIP3Q86Y13 1208 aaKnown RBP15.18■□□□□ 0.02
SMARCE1-203ENST00000377808 BCL2L12Q9HB09 334 aa15.18■□□□□ 0.02
SMARCE1-203ENST00000377808 LAS1LQ9Y4W2 734 aaKnown RBP15.18■□□□□ 0.02
SMARCE1-203ENST00000377808 KDM3BQ7LBC6 1761 aa15.18■□□□□ 0.02
SMARCE1-203ENST00000377808 NPHP1O15259 732 aa15.17■□□□□ 0.02
SMARCE1-203ENST00000377808 DPEP1P16444 411 aa15.17■□□□□ 0.02
SMARCE1-203ENST00000377808 TM4SF1P30408 202 aa15.17■□□□□ 0.02
SMARCE1-203ENST00000377808 N4BP2Q86UW6 1770 aaPredicted RBP15.17■□□□□ 0.02
SMARCE1-203ENST00000377808 EIF4A1P60842 406 aaKnown RBP15.17■□□□□ 0.02
SMARCE1-203ENST00000377808 TBC1D9BQ66K14 1250 aa15.17■□□□□ 0.02
SMARCE1-203ENST00000377808 NGEFQ8N5V2 710 aa15.17■□□□□ 0.02
SMARCE1-203ENST00000377808 BCS1LQ9Y276 419 aa15.17■□□□□ 0.02
SMARCE1-203ENST00000377808 CHD4Q14839 1912 aa15.16■□□□□ 0.02
SMARCE1-203ENST00000377808 KIF13BQ9NQT8 1826 aa15.16■□□□□ 0.02
SMARCE1-203ENST00000377808 SERPINB2P05120 415 aa15.16■□□□□ 0.02
SMARCE1-203ENST00000377808 PIAS4Q8N2W9 510 aaPredicted RBP15.16■□□□□ 0.02
SMARCE1-203ENST00000377808 SCN7AQ01118 1682 aa15.15■□□□□ 0.02
SMARCE1-203ENST00000377808 LAMB4A4D0S4 1761 aa15.15■□□□□ 0.02
SMARCE1-203ENST00000377808 GIGYF1O75420 1035 aaPredicted RBP15.15■□□□□ 0.02
SMARCE1-203ENST00000377808 NBPF26B4DH59 902 aa15.14■□□□□ 0.01
SMARCE1-203ENST00000377808 CAMTA2O94983 1202 aa15.14■□□□□ 0.01
SMARCE1-203ENST00000377808 MYL6BP14649 208 aa15.14■□□□□ 0.01
SMARCE1-203ENST00000377808 CHRNA5P30532 468 aa15.14■□□□□ 0.01
SMARCE1-203ENST00000377808 CCDC184Q52MB2 194 aa15.14■□□□□ 0.01
SMARCE1-203ENST00000377808 NBPF10Q6P3W6 841 aaKnown RBP15.14■□□□□ 0.01
SMARCE1-203ENST00000377808 NBPF15Q8N660 670 aa15.14■□□□□ 0.01
SMARCE1-203ENST00000377808 SETDB2Q96T68 719 aa15.14■□□□□ 0.01
SMARCE1-203ENST00000377808 ZNF652Q9Y2D9 606 aa15.14■□□□□ 0.01
SMARCE1-203ENST00000377808 KIAA1551Q9HCM1 1747 aa15.13■□□□□ 0.01
SMARCE1-203ENST00000377808 APAF1O14727 1248 aa15.13■□□□□ 0.01
SMARCE1-203ENST00000377808 EIF2S2P20042 333 aaKnown RBP15.13■□□□□ 0.01
SMARCE1-203ENST00000377808 CCDC24Q8N4L8 307 aa15.13■□□□□ 0.01
SMARCE1-203ENST00000377808 MRS2Q9HD23 443 aa15.13■□□□□ 0.01
SMARCE1-203ENST00000377808 TRIM35Q9UPQ4 493 aa15.13■□□□□ 0.01
SMARCE1-203ENST00000377808 CARMIL3Q8ND23 1372 aa15.12■□□□□ 0.01
SMARCE1-203ENST00000377808 AFDNP55196 1824 aaKnown RBP15.12■□□□□ 0.01
SMARCE1-203ENST00000377808 SENP3-EIF4A1A0A087X0R7 540 aa15.12■□□□□ 0.01
SMARCE1-203ENST00000377808 ZNF784Q8NCA9 323 aaPredicted RBP15.12■□□□□ 0.01
SMARCE1-203ENST00000377808 PIM2Q9P1W9 311 aa15.12■□□□□ 0.01
SMARCE1-203ENST00000377808 BCORQ6W2J9 1755 aa15.11■□□□□ 0.01
SMARCE1-203ENST00000377808 DALRD3Q5D0E6 543 aaKnown RBP15.11■□□□□ 0.01
SMARCE1-203ENST00000377808 KIF6Q6ZMV9 814 aa15.11■□□□□ 0.01
SMARCE1-203ENST00000377808 NECTIN2Q92692 538 aa15.11■□□□□ 0.01
SMARCE1-203ENST00000377808 BABAM1Q9NWV8 329 aa15.11■□□□□ 0.01
SMARCE1-203ENST00000377808 FAM177BA6PVY3 158 aa15.1■□□□□ 0.01
SMARCE1-203ENST00000377808 ST5P78524 1137 aa15.1■□□□□ 0.01
SMARCE1-203ENST00000377808 ARHGAP27Q6ZUM4 889 aa15.1■□□□□ 0.01
SMARCE1-203ENST00000377808 C2CD5Q86YS7 1000 aa15.1■□□□□ 0.01
SMARCE1-203ENST00000377808 CNBD1Q8NA66 436 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms