RNA–Protein interactions for RNA: ENST00000377625.6

TBC1D4-201, Transcript of TBC1 domain family member 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TBC1D4, Length 6,182 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D4-201ENST00000377625 CCDC183Q5T5S1 534 aa22.08■■□□□ 1.13
TBC1D4-201ENST00000377625 DNAI2Q9GZS0 605 aa22.08■■□□□ 1.13
TBC1D4-201ENST00000377625 EMILIN1Q9Y6C2 1016 aa22.08■■□□□ 1.13
TBC1D4-201ENST00000377625 TMEM266Q2M3C6 531 aa22.08■■□□□ 1.13
TBC1D4-201ENST00000377625 CUL5Q93034 780 aa22.08■■□□□ 1.13
TBC1D4-201ENST00000377625 SSRP1Q08945 709 aaKnown RBP22.07■■□□□ 1.12
TBC1D4-201ENST00000377625 RPGRQ92834 1020 aaKnown RBP22.07■■□□□ 1.12
TBC1D4-201ENST00000377625 SUPT6HQ7KZ85 1726 aaKnown RBP22.07■■□□□ 1.12
TBC1D4-201ENST00000377625 POLA1P09884 1462 aaPredicted RBP22.07■■□□□ 1.12
TBC1D4-201ENST00000377625 DBF4Q9UBU7 674 aaPredicted RBP22.07■■□□□ 1.12
TBC1D4-201ENST00000377625 IFIT3O14879 490 aaKnown RBP22.07■■□□□ 1.12
TBC1D4-201ENST00000377625 VPS36Q86VN1 386 aa22.07■■□□□ 1.12
TBC1D4-201ENST00000377625 PHF8Q9UPP1 1060 aa22.07■■□□□ 1.12
TBC1D4-201ENST00000377625 A0A087WZG4 1122 aa22.07■■□□□ 1.12
TBC1D4-201ENST00000377625 GOLGA8AA7E2F4 631 aa22.07■■□□□ 1.12
TBC1D4-201ENST00000377625 GOLGA8BA8MQT2 603 aa22.07■■□□□ 1.12
TBC1D4-201ENST00000377625 CCDC194A0A1B0GVG4 234 aa22.06■■□□□ 1.12
TBC1D4-201ENST00000377625 NESP48681 1621 aa22.06■■□□□ 1.12
TBC1D4-201ENST00000377625 ADAMTS2O95450 1211 aa22.06■■□□□ 1.12
TBC1D4-201ENST00000377625 DHX37Q8IY37 1157 aaKnown RBP22.06■■□□□ 1.12
TBC1D4-201ENST00000377625 KIF2AO00139 706 aaPredicted RBP22.06■■□□□ 1.12
TBC1D4-201ENST00000377625 PTPN14Q15678 1187 aa22.06■■□□□ 1.12
TBC1D4-201ENST00000377625 CRACR2AQ9BSW2 395 aa22.06■■□□□ 1.12
TBC1D4-201ENST00000377625 SYNJ1O43426 1573 aa22.06■■□□□ 1.12
TBC1D4-201ENST00000377625 NLRP5P59047 1200 aa22.06■■□□□ 1.12
TBC1D4-201ENST00000377625 TOP1P11387 765 aaKnown RBP22.06■■□□□ 1.12
TBC1D4-201ENST00000377625 TIAM1Q13009 1591 aa22.06■■□□□ 1.12
TBC1D4-201ENST00000377625 SLF2Q8IX21 1173 aa22.05■■□□□ 1.12
TBC1D4-201ENST00000377625 KIF5CO60282 957 aa22.05■■□□□ 1.12
TBC1D4-201ENST00000377625 GBP3Q9H0R5 595 aa22.05■■□□□ 1.12
TBC1D4-201ENST00000377625 LIMCH1Q9UPQ0 1083 aa22.05■■□□□ 1.12
TBC1D4-201ENST00000377625 EPRSP07814 1512 aaKnown RBP22.05■■□□□ 1.12
TBC1D4-201ENST00000377625 FGFR1OPO95684 399 aaKnown RBP22.05■■□□□ 1.12
TBC1D4-201ENST00000377625 FOXO3O43524 673 aa22.05■■□□□ 1.12
TBC1D4-201ENST00000377625 PLEKHH1Q9ULM0 1364 aa22.04■■□□□ 1.12
TBC1D4-201ENST00000377625 CCDC141Q6ZP82 1450 aa22.04■■□□□ 1.12
TBC1D4-201ENST00000377625 CATIPQ7Z7H3 387 aa22.04■■□□□ 1.12
TBC1D4-201ENST00000377625 NKTRP30414 1462 aaKnown RBP22.04■■□□□ 1.12
TBC1D4-201ENST00000377625 GPTP24298 496 aa22.03■■□□□ 1.12
TBC1D4-201ENST00000377625 ZSCAN30Q86W11 494 aa22.03■■□□□ 1.12
TBC1D4-201ENST00000377625 TMCO3Q6UWJ1 677 aa22.03■■□□□ 1.12
TBC1D4-201ENST00000377625 CNNM3Q8NE01 707 aa22.03■■□□□ 1.12
TBC1D4-201ENST00000377625 ZBTB3Q9H5J0 574 aa22.03■■□□□ 1.12
TBC1D4-201ENST00000377625 WDR97A6NE52 1622 aa22.03■■□□□ 1.12
TBC1D4-201ENST00000377625 CCT2P78371 535 aaKnown RBP22.03■■□□□ 1.12
TBC1D4-201ENST00000377625 C20orf194Q5TEA3 1177 aa22.03■■□□□ 1.12
TBC1D4-201ENST00000377625 WDR78Q5VTH9 848 aa22.03■■□□□ 1.12
TBC1D4-201ENST00000377625 WDHD1O75717 1129 aaPredicted RBP22.03■■□□□ 1.12
TBC1D4-201ENST00000377625 ANAPC15P60006 121 aa22.03■■□□□ 1.12
TBC1D4-201ENST00000377625 CCDC97Q96F63 343 aaPredicted RBP22.03■■□□□ 1.12
TBC1D4-201ENST00000377625 KIF20AO95235 890 aa22.02■■□□□ 1.12
TBC1D4-201ENST00000377625 CASQ1P31415 396 aa22.02■■□□□ 1.12
TBC1D4-201ENST00000377625 KIF4BQ2VIQ3 1234 aa22.02■■□□□ 1.12
TBC1D4-201ENST00000377625 EVI5LQ96CN4 794 aa22.02■■□□□ 1.12
TBC1D4-201ENST00000377625 FLIIQ13045 1269 aa22.01■■□□□ 1.11
TBC1D4-201ENST00000377625 AMOTL2Q9Y2J4 779 aa22.01■■□□□ 1.11
TBC1D4-201ENST00000377625 CTAGE5O15320 804 aa22.01■■□□□ 1.11
TBC1D4-201ENST00000377625 CCDC113Q9H0I3 377 aa22.01■■□□□ 1.11
TBC1D4-201ENST00000377625 EHMT1Q9H9B1 1298 aa22.01■■□□□ 1.11
TBC1D4-201ENST00000377625 PTPRCP08575 1304 aa22.01■■□□□ 1.11
TBC1D4-201ENST00000377625 PDCL2Q8N4E4 241 aa22.01■■□□□ 1.11
TBC1D4-201ENST00000377625 DYDC1Q8WWB3 177 aa22.01■■□□□ 1.11
TBC1D4-201ENST00000377625 NUP88Q99567 741 aaPredicted RBP22.01■■□□□ 1.11
TBC1D4-201ENST00000377625 ZNF219Q9P2Y4 722 aaPredicted RBP22.01■■□□□ 1.11
TBC1D4-201ENST00000377625 WASLO00401 505 aaPredicted RBP22.01■■□□□ 1.11
TBC1D4-201ENST00000377625 CLIP2Q9UDT6 1046 aa22.01■■□□□ 1.11
TBC1D4-201ENST00000377625 CCDC178Q5BJE1 867 aa22■■□□□ 1.11
TBC1D4-201ENST00000377625 LUZP1Q86V48 1076 aa22■■□□□ 1.11
TBC1D4-201ENST00000377625 CCDC91Q7Z6B0 441 aa22■■□□□ 1.11
TBC1D4-201ENST00000377625 CDK13Q14004 1512 aaKnown RBP22■■□□□ 1.11
TBC1D4-201ENST00000377625 TOPBP1Q92547 1522 aa22■■□□□ 1.11
TBC1D4-201ENST00000377625 URI1O94763 535 aaPredicted RBP22■■□□□ 1.11
TBC1D4-201ENST00000377625 TTLL12Q14166 644 aaPredicted RBP22■■□□□ 1.11
TBC1D4-201ENST00000377625 MAP3K2Q9Y2U5 619 aa22■■□□□ 1.11
TBC1D4-201ENST00000377625 C6orf229H3BNL8 230 aa22■■□□□ 1.11
TBC1D4-201ENST00000377625 EXOC5O00471 708 aa22■■□□□ 1.11
TBC1D4-201ENST00000377625 CKAP2LQ8IYA6 745 aa22■■□□□ 1.11
TBC1D4-201ENST00000377625 KIF18AQ8NI77 898 aa21.99■■□□□ 1.11
TBC1D4-201ENST00000377625 GOLIM4O00461 696 aa21.99■■□□□ 1.11
TBC1D4-201ENST00000377625 TDRD12Q587J7 1177 aaKnown RBP21.99■■□□□ 1.11
TBC1D4-201ENST00000377625 CCDC150Q8NCX0 1101 aa21.99■■□□□ 1.11
TBC1D4-201ENST00000377625 ECHDC1Q9NTX5 307 aa21.99■■□□□ 1.11
TBC1D4-201ENST00000377625 FSIP1Q8NA03 581 aa21.99■■□□□ 1.11
TBC1D4-201ENST00000377625 CPLX3Q8WVH0 158 aa21.99■■□□□ 1.11
TBC1D4-201ENST00000377625 BAG4O95429 457 aaKnown RBP21.99■■□□□ 1.11
TBC1D4-201ENST00000377625 DNA2P51530 1060 aa21.99■■□□□ 1.11
TBC1D4-201ENST00000377625 LARP6Q9BRS8 491 aaKnown RBP21.99■■□□□ 1.11
TBC1D4-201ENST00000377625 TTF1Q15361 905 aaPredicted RBP21.99■■□□□ 1.11
TBC1D4-201ENST00000377625 PRXQ9BXM0 1461 aa21.98■■□□□ 1.11
TBC1D4-201ENST00000377625 ARHGEF11O15085 1522 aa21.98■■□□□ 1.11
TBC1D4-201ENST00000377625 USO1O60763 962 aaKnown RBP21.98■■□□□ 1.11
TBC1D4-201ENST00000377625 GSTTP1A0A1W2PQM5 241 aa21.98■■□□□ 1.11
TBC1D4-201ENST00000377625 SSFA2P28290 1259 aa21.98■■□□□ 1.11
TBC1D4-201ENST00000377625 YEATS4O95619 227 aa21.98■■□□□ 1.11
TBC1D4-201ENST00000377625 MAP9Q49MG5 647 aa21.98■■□□□ 1.11
TBC1D4-201ENST00000377625 LDHAL6AQ6ZMR3 332 aa21.98■■□□□ 1.11
TBC1D4-201ENST00000377625 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP21.98■■□□□ 1.114e-6■■□□□ 13.6
TBC1D4-201ENST00000377625 CTNNBL1Q8WYA6 563 aaPredicted RBP21.97■■□□□ 1.11
TBC1D4-201ENST00000377625 ERICH4A6NGS2 130 aa21.97■■□□□ 1.11
TBC1D4-201ENST00000377625 LIG1P18858 919 aa21.97■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms