RNA–Protein interactions for RNA: ENST00000376909.6

SSX9-201, Transcript of Protein SSX9, humanhuman

BASIC

Gene SSX9, Length 591 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX9-201ENST00000376909 IRX6P78412 446 aaPredicted RBP9.99□□□□□ -0.81
SSX9-201ENST00000376909 MKRN3Q13064 507 aaKnown RBP9.99□□□□□ -0.81
SSX9-201ENST00000376909 ALDH1L2Q3SY69 923 aa9.99□□□□□ -0.81
SSX9-201ENST00000376909 TSPYL6Q8N831 410 aa9.99□□□□□ -0.81
SSX9-201ENST00000376909 SLC52A2Q9HAB3 445 aa9.99□□□□□ -0.81
SSX9-201ENST00000376909 KDM6AO15550 1401 aaPredicted RBP9.99□□□□□ -0.81
SSX9-201ENST00000376909 ERVV-2B6SEH9 535 aa9.98□□□□□ -0.81
SSX9-201ENST00000376909 PLIN1O60240 522 aa9.98□□□□□ -0.81
SSX9-201ENST00000376909 CABP4P57796 275 aa9.98□□□□□ -0.81
SSX9-201ENST00000376909 SSH1Q8WYL5 1049 aa9.98□□□□□ -0.81
SSX9-201ENST00000376909 SMC4Q9NTJ3 1288 aa9.98□□□□□ -0.81
SSX9-201ENST00000376909 AFF2P51816 1311 aa9.98□□□□□ -0.81
SSX9-201ENST00000376909 PLCG2P16885 1265 aa9.97□□□□□ -0.81
SSX9-201ENST00000376909 CANXP27824 592 aaKnown RBP9.97□□□□□ -0.81
SSX9-201ENST00000376909 DDB1Q16531 1140 aa9.97□□□□□ -0.81
SSX9-201ENST00000376909 KRT24Q2M2I5 525 aa9.97□□□□□ -0.81
SSX9-201ENST00000376909 ERICH6BQ5W0A0 696 aa9.97□□□□□ -0.81
SSX9-201ENST00000376909 NFATC2IPQ8NCF5 419 aa9.97□□□□□ -0.81
SSX9-201ENST00000376909 FBXO41Q8TF61 875 aa9.97□□□□□ -0.81
SSX9-201ENST00000376909 BCL2L13Q9BXK5 485 aa9.97□□□□□ -0.81
SSX9-201ENST00000376909 OCEL1Q9H607 264 aa9.97□□□□□ -0.81
SSX9-201ENST00000376909 SOS1Q07889 1333 aaPredicted RBP9.97□□□□□ -0.81
SSX9-201ENST00000376909 ADAMTS7Q9UKP4 1686 aa9.96□□□□□ -0.81
SSX9-201ENST00000376909 KCNQ3O43525 872 aa9.96□□□□□ -0.82
SSX9-201ENST00000376909 BRPF1P55201 1214 aaPredicted RBP9.96□□□□□ -0.82
SSX9-201ENST00000376909 EIF4A1P60842 406 aaKnown RBP9.96□□□□□ -0.82
SSX9-201ENST00000376909 IRX5P78411 483 aaPredicted RBP9.96□□□□□ -0.82
SSX9-201ENST00000376909 FAM98CQ17RN3 349 aaKnown RBP9.96□□□□□ -0.82
SSX9-201ENST00000376909 FRAT1Q92837 279 aaPredicted RBP9.96□□□□□ -0.82
SSX9-201ENST00000376909 RNF25Q96BH1 459 aaPredicted RBP9.96□□□□□ -0.82
SSX9-201ENST00000376909 TRPC5Q9UL62 973 aaPredicted RBP9.96□□□□□ -0.82
SSX9-201ENST00000376909 TNS2Q63HR2 1409 aa9.96□□□□□ -0.82
SSX9-201ENST00000376909 ZNF790Q6PG37 636 aa9.95□□□□□ -0.82
SSX9-201ENST00000376909 MRPL50Q8N5N7 158 aaKnown RBP9.95□□□□□ -0.82
SSX9-201ENST00000376909 GJD4Q96KN9 370 aaPredicted RBP9.95□□□□□ -0.82
SSX9-201ENST00000376909 CHMP4AQ9BY43 222 aa9.95□□□□□ -0.82
SSX9-201ENST00000376909 MRC1P22897 1456 aa9.95□□□□□ -0.82
SSX9-201ENST00000376909 ATRNO75882 1429 aa9.94□□□□□ -0.82
SSX9-201ENST00000376909 KIF16BQ96L93 1317 aa9.94□□□□□ -0.82
SSX9-201ENST00000376909 POTEFA5A3E0 1075 aa9.94□□□□□ -0.82
SSX9-201ENST00000376909 POTEB2H3BUK9 544 aa9.94□□□□□ -0.82
SSX9-201ENST00000376909 TCERG1O14776 1098 aaKnown RBP9.94□□□□□ -0.82
SSX9-201ENST00000376909 IPO8O15397 1037 aaKnown RBP9.94□□□□□ -0.82
SSX9-201ENST00000376909 HOXB7P09629 217 aa9.94□□□□□ -0.82
SSX9-201ENST00000376909 MS4A1P11836 297 aa9.94□□□□□ -0.82
SSX9-201ENST00000376909 SLC39A6Q13433 755 aa9.94□□□□□ -0.82
SSX9-201ENST00000376909 PDE3AQ14432 1141 aa9.94□□□□□ -0.82
SSX9-201ENST00000376909 C20orf194Q5TEA3 1177 aa9.94□□□□□ -0.82
SSX9-201ENST00000376909 CCDC30Q5VVM6 783 aa9.94□□□□□ -0.82
SSX9-201ENST00000376909 ZKSCAN2Q63HK3 967 aa9.94□□□□□ -0.82
SSX9-201ENST00000376909 TTC5Q8N0Z6 440 aa9.94□□□□□ -0.82
SSX9-201ENST00000376909 NOB1Q9ULX3 412 aaKnown RBP9.94□□□□□ -0.82
SSX9-201ENST00000376909 A0A0G2JS52 829 aa9.93□□□□□ -0.82
SSX9-201ENST00000376909 MYT1Q01538 1121 aa9.93□□□□□ -0.82
SSX9-201ENST00000376909 MARCH10Q8NA82 808 aaPredicted RBP9.93□□□□□ -0.82
SSX9-201ENST00000376909 STK31Q9BXU1 1019 aa9.93□□□□□ -0.82
SSX9-201ENST00000376909 QTRT2Q9H974 415 aaKnown RBP9.93□□□□□ -0.82
SSX9-201ENST00000376909 TMOD3Q9NYL9 352 aa9.93□□□□□ -0.82
SSX9-201ENST00000376909 COLQQ9Y215 455 aaPredicted RBP9.93□□□□□ -0.82
SSX9-201ENST00000376909 HEG1Q9ULI3 1381 aa9.92□□□□□ -0.82
SSX9-201ENST00000376909 GIGYF1O75420 1035 aaPredicted RBP9.92□□□□□ -0.82
SSX9-201ENST00000376909 HDGFL1Q5TGJ6 251 aa9.92□□□□□ -0.82
SSX9-201ENST00000376909 ATF7IPQ6VMQ6 1270 aa9.92□□□□□ -0.82
SSX9-201ENST00000376909 ARHGAP45Q92619 1136 aa9.92□□□□□ -0.82
SSX9-201ENST00000376909 FMNL2Q96PY5 1086 aa9.92□□□□□ -0.82
SSX9-201ENST00000376909 CRBNQ96SW2 442 aa9.92□□□□□ -0.82
SSX9-201ENST00000376909 SCN11AQ9UI33 1791 aa9.92□□□□□ -0.82
SSX9-201ENST00000376909 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.92□□□□□ -0.82
SSX9-201ENST00000376909 SHANK3Q9BYB0 1731 aa9.91□□□□□ -0.82
SSX9-201ENST00000376909 ONECUT3O60422 494 aaPredicted RBP9.91□□□□□ -0.82
SSX9-201ENST00000376909 EIF2S2P20042 333 aaKnown RBP9.91□□□□□ -0.82
SSX9-201ENST00000376909 ZNF772Q68DY9 489 aaPredicted RBP9.91□□□□□ -0.82
SSX9-201ENST00000376909 FTSJ3Q8IY81 847 aaKnown RBP9.91□□□□□ -0.82
SSX9-201ENST00000376909 DZIP1LQ8IYY4 767 aaKnown RBP9.91□□□□□ -0.82
SSX9-201ENST00000376909 EXOC6Q8TAG9 804 aa9.91□□□□□ -0.82
SSX9-201ENST00000376909 PANK1Q8TE04 598 aa9.91□□□□□ -0.82
SSX9-201ENST00000376909 PIGBQ92521 554 aa9.91□□□□□ -0.82
SSX9-201ENST00000376909 NECTIN2Q92692 538 aa9.91□□□□□ -0.82
SSX9-201ENST00000376909 ZNF496Q96IT1 587 aaPredicted RBP9.91□□□□□ -0.82
SSX9-201ENST00000376909 SCUBE2Q9NQ36 999 aa9.91□□□□□ -0.82
SSX9-201ENST00000376909 WNK3Q9BYP7 1800 aa9.91□□□□□ -0.82
SSX9-201ENST00000376909 KDM3BQ7LBC6 1761 aa9.91□□□□□ -0.82
SSX9-201ENST00000376909 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.9□□□□□ -0.82
SSX9-201ENST00000376909 SNRPA1P09661 255 aaKnown RBP9.9□□□□□ -0.82
SSX9-201ENST00000376909 TRIM27P14373 513 aa9.9□□□□□ -0.82
SSX9-201ENST00000376909 PRIM1P49642 420 aaKnown RBP9.9□□□□□ -0.82
SSX9-201ENST00000376909 SYTL4Q96C24 671 aaPredicted RBP9.9□□□□□ -0.82
SSX9-201ENST00000376909 ZFP91Q96JP5 570 aaPredicted RBP9.9□□□□□ -0.82
SSX9-201ENST00000376909 API5Q9BZZ5 524 aaKnown RBP9.9□□□□□ -0.82
SSX9-201ENST00000376909 PPP4R2Q9NY27 417 aa9.9□□□□□ -0.82
SSX9-201ENST00000376909 PTPRCP08575 1304 aa9.89□□□□□ -0.83
SSX9-201ENST00000376909 SIPA1L3O60292 1781 aaPredicted RBP9.89□□□□□ -0.83
SSX9-201ENST00000376909 ILDR1Q86SU0 546 aaPredicted RBP9.89□□□□□ -0.83
SSX9-201ENST00000376909 SEPT12Q8IYM1 358 aa9.89□□□□□ -0.83
SSX9-201ENST00000376909 CLUAP1Q96AJ1 413 aa9.89□□□□□ -0.83
SSX9-201ENST00000376909 OTUD5Q96G74 571 aa9.89□□□□□ -0.83
SSX9-201ENST00000376909 TNNQ9UQP3 1299 aa9.89□□□□□ -0.83
SSX9-201ENST00000376909 BCL9O00512 1426 aa9.89□□□□□ -0.83
SSX9-201ENST00000376909 GLI3P10071 1580 aa9.88□□□□□ -0.83
SSX9-201ENST00000376909 PRAMEF22A3QJZ6 481 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms