RNA–Protein interactions for RNA: ENST00000374607.5

PFDN6-202, Transcript of prefoldin subunit 6, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PFDN6, Length 598 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN6-202ENST00000374607 ZNF853P0CG23 659 aa19.73■□□□□ 0.75
PFDN6-202ENST00000374607 CYP19A1P11511 503 aaPredicted RBP19.73■□□□□ 0.75
PFDN6-202ENST00000374607 CANXP27824 592 aaKnown RBP19.73■□□□□ 0.75
PFDN6-202ENST00000374607 TSR2Q969E8 191 aaKnown RBP19.73■□□□□ 0.75
PFDN6-202ENST00000374607 PRAMEF22A3QJZ6 481 aa19.72■□□□□ 0.75
PFDN6-202ENST00000374607 EIF2S2P20042 333 aaKnown RBP19.72■□□□□ 0.75
PFDN6-202ENST00000374607 TJP1Q07157 1748 aa19.72■□□□□ 0.75
PFDN6-202ENST00000374607 ARXQ96QS3 562 aa19.72■□□□□ 0.75
PFDN6-202ENST00000374607 USP16Q9Y5T5 823 aa19.72■□□□□ 0.75
PFDN6-202ENST00000374607 TRAPPC3LQ5T215 181 aa19.71■□□□□ 0.75
PFDN6-202ENST00000374607 ELL2O00472 640 aaPredicted RBP19.7■□□□□ 0.74
PFDN6-202ENST00000374607 RPS6KA4O75676 772 aa19.7■□□□□ 0.74
PFDN6-202ENST00000374607 SSFA2P28290 1259 aa19.7■□□□□ 0.74
PFDN6-202ENST00000374607 COL5A3P25940 1745 aaPredicted RBP19.7■□□□□ 0.74
PFDN6-202ENST00000374607 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.69■□□□□ 0.74
PFDN6-202ENST00000374607 E9PSI1 815 aa19.69■□□□□ 0.74
PFDN6-202ENST00000374607 A1BGP04217 495 aa19.69■□□□□ 0.74
PFDN6-202ENST00000374607 RFC4P35249 363 aa19.69■□□□□ 0.74
PFDN6-202ENST00000374607 DUSP27Q5VZP5 1158 aa19.69■□□□□ 0.74
PFDN6-202ENST00000374607 INTS5Q6P9B9 1019 aaKnown RBP19.69■□□□□ 0.74
PFDN6-202ENST00000374607 NECTIN2Q92692 538 aa19.69■□□□□ 0.74
PFDN6-202ENST00000374607 CHMP4AQ9BY43 222 aa19.69■□□□□ 0.74
PFDN6-202ENST00000374607 ZBTB1Q9Y2K1 713 aa19.69■□□□□ 0.74
PFDN6-202ENST00000374607 KRT24Q2M2I5 525 aa19.68■□□□□ 0.74
PFDN6-202ENST00000374607 FANCIQ9NVI1 1328 aa19.68■□□□□ 0.74
PFDN6-202ENST00000374607 CICQ96RK0 1608 aaPredicted RBP19.67■□□□□ 0.74
PFDN6-202ENST00000374607 ADRA2BP18089 450 aa19.67■□□□□ 0.74
PFDN6-202ENST00000374607 HDGFL1Q5TGJ6 251 aa19.67■□□□□ 0.74
PFDN6-202ENST00000374607 PNPLA7Q6ZV29 1317 aa19.67■□□□□ 0.74
PFDN6-202ENST00000374607 ZNF521Q96K83 1311 aa19.67■□□□□ 0.74
PFDN6-202ENST00000374607 LRP5O75197 1615 aa19.66■□□□□ 0.74
PFDN6-202ENST00000374607 A0A087WZG4 1122 aa19.66■□□□□ 0.74
PFDN6-202ENST00000374607 HOXB7P09629 217 aa19.66■□□□□ 0.74
PFDN6-202ENST00000374607 PIP4K2AP48426 406 aaPredicted RBP19.66■□□□□ 0.74
PFDN6-202ENST00000374607 SMIM5Q71RC9 77 aa19.66■□□□□ 0.74
PFDN6-202ENST00000374607 COL23A1Q86Y22 540 aaPredicted RBP19.66■□□□□ 0.74
PFDN6-202ENST00000374607 ZPR1O75312 459 aa19.65■□□□□ 0.74
PFDN6-202ENST00000374607 MYL6BP14649 208 aa19.65■□□□□ 0.74
PFDN6-202ENST00000374607 C8orf58Q8NAV2 365 aa19.65■□□□□ 0.74
PFDN6-202ENST00000374607 ARHGEF1Q92888 912 aaKnown RBP19.65■□□□□ 0.74
PFDN6-202ENST00000374607 IL6STP40189 918 aaPredicted RBP19.64■□□□□ 0.73
PFDN6-202ENST00000374607 EXOSC9Q06265 439 aaKnown RBP19.64■□□□□ 0.73
PFDN6-202ENST00000374607 TWISTNBQ3B726 338 aaPredicted RBP19.64■□□□□ 0.73
PFDN6-202ENST00000374607 SPINK5Q9NQ38 1064 aaPredicted RBP19.64■□□□□ 0.73
PFDN6-202ENST00000374607 LAMB4A4D0S4 1761 aa19.64■□□□□ 0.73
PFDN6-202ENST00000374607 COL15A1P39059 1388 aa19.63■□□□□ 0.73
PFDN6-202ENST00000374607 SOS1Q07889 1333 aaPredicted RBP19.63■□□□□ 0.73
PFDN6-202ENST00000374607 ZBTB7AO95365 584 aa19.63■□□□□ 0.73
PFDN6-202ENST00000374607 SLFN5Q08AF3 891 aa19.63■□□□□ 0.73
PFDN6-202ENST00000374607 SLC16A10Q8TF71 515 aa19.63■□□□□ 0.73
PFDN6-202ENST00000374607 YTHDC1Q96MU7 727 aaKnown RBP19.63■□□□□ 0.73
PFDN6-202ENST00000374607 UBR3Q6ZT12 1888 aa19.62■□□□□ 0.73
PFDN6-202ENST00000374607 ERBB4Q15303 1308 aa19.62■□□□□ 0.73
PFDN6-202ENST00000374607 CCDC30Q5VVM6 783 aa19.62■□□□□ 0.73
PFDN6-202ENST00000374607 CDCA7LQ96GN5 454 aa19.62■□□□□ 0.73
PFDN6-202ENST00000374607 STK31Q9BXU1 1019 aa19.62■□□□□ 0.73
PFDN6-202ENST00000374607 PDGFDQ9GZP0 370 aaPredicted RBP19.62■□□□□ 0.73
PFDN6-202ENST00000374607 TUBGCP6Q96RT7 1819 aa19.62■□□□□ 0.73
PFDN6-202ENST00000374607 QSER1Q2KHR3 1735 aa19.62■□□□□ 0.73
PFDN6-202ENST00000374607 MYH14Q7Z406 1995 aaKnown RBP19.61■□□□□ 0.73
PFDN6-202ENST00000374607 ZBED9Q6R2W3 1325 aa19.61■□□□□ 0.73
PFDN6-202ENST00000374607 AMIGO3Q86WK7 504 aa19.61■□□□□ 0.73
PFDN6-202ENST00000374607 TSPYL6Q8N831 410 aa19.61■□□□□ 0.73
PFDN6-202ENST00000374607 DBF4Q9UBU7 674 aaPredicted RBP19.61■□□□□ 0.73
PFDN6-202ENST00000374607 ATF5Q9Y2D1 282 aaPredicted RBP19.61■□□□□ 0.73
PFDN6-202ENST00000374607 EIF5P55010 431 aaKnown RBP19.6■□□□□ 0.73
PFDN6-202ENST00000374607 KIF6Q6ZMV9 814 aa19.6■□□□□ 0.73
PFDN6-202ENST00000374607 DZIP3Q86Y13 1208 aaKnown RBP19.6■□□□□ 0.73
PFDN6-202ENST00000374607 MTFR1LQ9H019 292 aa19.6■□□□□ 0.73
PFDN6-202ENST00000374607 SPON1Q9HCB6 807 aa19.6■□□□□ 0.73
PFDN6-202ENST00000374607 NBPF26B4DH59 902 aa19.59■□□□□ 0.73
PFDN6-202ENST00000374607 POLD1P28340 1107 aa19.59■□□□□ 0.73
PFDN6-202ENST00000374607 MSL1Q68DK7 614 aa19.59■□□□□ 0.73
PFDN6-202ENST00000374607 NBPF10Q6P3W6 841 aaKnown RBP19.59■□□□□ 0.73
PFDN6-202ENST00000374607 NBPF15Q8N660 670 aa19.59■□□□□ 0.73
PFDN6-202ENST00000374607 CHPF2Q9P2E5 772 aa19.59■□□□□ 0.73
PFDN6-202ENST00000374607 TBC1D2BQ9UPU7 963 aa19.59■□□□□ 0.73
PFDN6-202ENST00000374607 AIMP1Q12904 312 aaKnown RBP19.58■□□□□ 0.72
PFDN6-202ENST00000374607 USPL1Q5W0Q7 1092 aa19.58■□□□□ 0.72
PFDN6-202ENST00000374607 DDX21Q9NR30 783 aaKnown RBP eCLIP19.58■□□□□ 0.72
PFDN6-202ENST00000374607 SRP68Q9UHB9 627 aaKnown RBP19.58■□□□□ 0.72
PFDN6-202ENST00000374607 ANXA1P04083 346 aa19.57■□□□□ 0.72
PFDN6-202ENST00000374607 HYPKQ9NX55 129 aa19.57■□□□□ 0.72
PFDN6-202ENST00000374607 NARFQ9UHQ1 456 aa19.57■□□□□ 0.72
PFDN6-202ENST00000374607 USP42Q9H9J4 1324 aaKnown RBP19.56■□□□□ 0.72
PFDN6-202ENST00000374607 TCERG1O14776 1098 aaKnown RBP19.56■□□□□ 0.72
PFDN6-202ENST00000374607 NLGN1Q8N2Q7 840 aa19.56■□□□□ 0.72
PFDN6-202ENST00000374607 PPP1R1BQ9UD71 204 aaPredicted RBP19.56■□□□□ 0.72
PFDN6-202ENST00000374607 ZNF652Q9Y2D9 606 aa19.56■□□□□ 0.72
PFDN6-202ENST00000374607 CASZ1Q86V15 1759 aa19.56■□□□□ 0.72
PFDN6-202ENST00000374607 VAMP4O75379 141 aa19.54■□□□□ 0.72
PFDN6-202ENST00000374607 PROSER3Q2NL68 480 aa19.54■□□□□ 0.72
PFDN6-202ENST00000374607 COPS6Q7L5N1 327 aa19.54■□□□□ 0.72
PFDN6-202ENST00000374607 SLC4A2P04920 1241 aa19.53■□□□□ 0.72
PFDN6-202ENST00000374607 GYS1P13807 737 aa19.53■□□□□ 0.72
PFDN6-202ENST00000374607 PDIA6Q15084 440 aa19.53■□□□□ 0.72
PFDN6-202ENST00000374607 XAGE3Q8WTP9 111 aa19.53■□□□□ 0.72
PFDN6-202ENST00000374607 C4AP0C0L4 1744 aa19.53■□□□□ 0.72
PFDN6-202ENST00000374607 NPHP1O15259 732 aa19.52■□□□□ 0.72
PFDN6-202ENST00000374607 BICDL1Q6ZP65 573 aa19.52■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms