RNA–Protein interactions for RNA: ENST00000374490.7

HMGCL-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCL, Length 1,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-203ENST00000374490 N4BP2Q86UW6 1770 aaPredicted RBP17.15■□□□□ 0.34
HMGCL-203ENST00000374490 CRYBG1Q9Y4K1 1723 aa17.15■□□□□ 0.34
HMGCL-203ENST00000374490 FSD2A1L4K1 749 aa17.14■□□□□ 0.33
HMGCL-203ENST00000374490 SDSP20132 328 aa17.14■□□□□ 0.33
HMGCL-203ENST00000374490 BAG6P46379 1132 aa17.14■□□□□ 0.33
HMGCL-203ENST00000374490 SLC4A10Q6U841 1118 aa17.14■□□□□ 0.33
HMGCL-203ENST00000374490 G2E3Q7L622 706 aa17.14■□□□□ 0.33
HMGCL-203ENST00000374490 NWD2Q9ULI1 1742 aa17.14■□□□□ 0.33
HMGCL-203ENST00000374490 C16orf71Q8IYS4 520 aaPredicted RBP17.14■□□□□ 0.33
HMGCL-203ENST00000374490 TNPO1Q92973 898 aaKnown RBP17.14■□□□□ 0.33
HMGCL-203ENST00000374490 RGPD2P0DJD1 1756 aa17.13■□□□□ 0.33
HMGCL-203ENST00000374490 PRDM11Q9NQV5 511 aa17.13■□□□□ 0.33
HMGCL-203ENST00000374490 ABCC6O95255 1503 aa17.13■□□□□ 0.33
HMGCL-203ENST00000374490 PLCH1Q4KWH8 1693 aa17.12■□□□□ 0.33
HMGCL-203ENST00000374490 RGPD5Q99666 1765 aa17.12■□□□□ 0.33
HMGCL-203ENST00000374490 HOXB7P09629 217 aa17.12■□□□□ 0.33
HMGCL-203ENST00000374490 ZC3H6P61129 1189 aaKnown RBP17.12■□□□□ 0.33
HMGCL-203ENST00000374490 ATP8B2P98198 1209 aa17.12■□□□□ 0.33
HMGCL-203ENST00000374490 FKBP5Q13451 457 aaPredicted RBP17.12■□□□□ 0.33
HMGCL-203ENST00000374490 CLEC17AQ6ZS10 378 aa17.12■□□□□ 0.33
HMGCL-203ENST00000374490 F6X3S4 739 aa17.11■□□□□ 0.33
HMGCL-203ENST00000374490 ERC2O15083 957 aa17.11■□□□□ 0.33
HMGCL-203ENST00000374490 SMARCA5O60264 1052 aaPredicted RBP17.11■□□□□ 0.33
HMGCL-203ENST00000374490 FAM43AQ8N2R8 423 aa17.11■□□□□ 0.33
HMGCL-203ENST00000374490 USHBP1Q8N6Y0 703 aa17.11■□□□□ 0.33
HMGCL-203ENST00000374490 ANKRD24Q8TF21 1146 aa17.11■□□□□ 0.33
HMGCL-203ENST00000374490 SRCIN1Q9C0H9 1055 aa17.11■□□□□ 0.33
HMGCL-203ENST00000374490 CAMTA1Q9Y6Y1 1673 aa17.11■□□□□ 0.33
HMGCL-203ENST00000374490 AOX1Q06278 1338 aa17.11■□□□□ 0.33
HMGCL-203ENST00000374490 CACNA1FO60840 1977 aa17.11■□□□□ 0.33
HMGCL-203ENST00000374490 GOLGA6L22H0YM25 854 aa17.1■□□□□ 0.33
HMGCL-203ENST00000374490 ST18O60284 1047 aa17.1■□□□□ 0.33
HMGCL-203ENST00000374490 PDE1AP54750 535 aa17.1■□□□□ 0.33
HMGCL-203ENST00000374490 NBPF6Q5VWK0 638 aa17.1■□□□□ 0.33
HMGCL-203ENST00000374490 IL17REQ8NFR9 667 aa17.1■□□□□ 0.33
HMGCL-203ENST00000374490 OTUD7AQ8TE49 926 aaPredicted RBP17.1■□□□□ 0.33
HMGCL-203ENST00000374490 NBPF4Q96M43 638 aa17.1■□□□□ 0.33
HMGCL-203ENST00000374490 SPATA31A5Q5VU36 1347 aa17.1■□□□□ 0.33
HMGCL-203ENST00000374490 SPATA31A7Q8IWB4 1347 aa17.1■□□□□ 0.33
HMGCL-203ENST00000374490 CEMIPQ8WUJ3 1361 aa17.1■□□□□ 0.33
HMGCL-203ENST00000374490 LRRCC1Q9C099 1032 aa17.1■□□□□ 0.33
HMGCL-203ENST00000374490 CWC22Q9HCG8 908 aaKnown RBP17.1■□□□□ 0.33
HMGCL-203ENST00000374490 ABCA3Q99758 1704 aa17.1■□□□□ 0.33
HMGCL-203ENST00000374490 CD2BP2O95400 341 aaKnown RBP17.09■□□□□ 0.33
HMGCL-203ENST00000374490 MRE11P49959 708 aa17.09■□□□□ 0.33
HMGCL-203ENST00000374490 NUCB2P80303 420 aa17.09■□□□□ 0.33
HMGCL-203ENST00000374490 IBTKQ9P2D0 1353 aaPredicted RBP17.08■□□□□ 0.33
HMGCL-203ENST00000374490 RBM42Q9BTD8 480 aaKnown RBP17.08■□□□□ 0.32
HMGCL-203ENST00000374490 SALL3Q9BXA9 1300 aa17.08■□□□□ 0.32
HMGCL-203ENST00000374490 APBB1O00213 710 aa17.07■□□□□ 0.32
HMGCL-203ENST00000374490 NCAPD2Q15021 1401 aa17.07■□□□□ 0.32
HMGCL-203ENST00000374490 COL18A1P39060 1754 aa17.07■□□□□ 0.32
HMGCL-203ENST00000374490 ERBB3P21860 1342 aa17.07■□□□□ 0.32
HMGCL-203ENST00000374490 CPDO75976 1380 aa17.07■□□□□ 0.32
HMGCL-203ENST00000374490 OVOS2A0A0G2JMS6 1433 aa17.07■□□□□ 0.32
HMGCL-203ENST00000374490 COL14A1Q05707 1796 aaKnown RBP17.07■□□□□ 0.32
HMGCL-203ENST00000374490 EPB41L2O43491 1005 aaKnown RBP17.07■□□□□ 0.32
HMGCL-203ENST00000374490 HDGFL1Q5TGJ6 251 aa17.07■□□□□ 0.32
HMGCL-203ENST00000374490 STAP2Q9UGK3 403 aa17.07■□□□□ 0.32
HMGCL-203ENST00000374490 RAB11FIP3O75154 756 aa17.06■□□□□ 0.32
HMGCL-203ENST00000374490 UBTFL1P0CB47 393 aaPredicted RBP17.06■□□□□ 0.32
HMGCL-203ENST00000374490 MCCP23508 829 aa17.06■□□□□ 0.32
HMGCL-203ENST00000374490 AXIN2Q9Y2T1 843 aa17.06■□□□□ 0.32
HMGCL-203ENST00000374490 BRWD3Q6RI45 1802 aa17.05■□□□□ 0.32
HMGCL-203ENST00000374490 LMO7Q8WWI1 1683 aa17.05■□□□□ 0.32
HMGCL-203ENST00000374490 MX1P20591 662 aa17.05■□□□□ 0.32
HMGCL-203ENST00000374490 MCM2P49736 904 aa17.05■□□□□ 0.32
HMGCL-203ENST00000374490 STRN4Q9NRL3 753 aa17.05■□□□□ 0.32
HMGCL-203ENST00000374490 NRAPQ86VF7 1730 aa17.04■□□□□ 0.32
HMGCL-203ENST00000374490 PSDA5PKW4 1024 aaPredicted RBP17.04■□□□□ 0.32
HMGCL-203ENST00000374490 CSB-PGBD3P0DP91 1061 aa17.04■□□□□ 0.32
HMGCL-203ENST00000374490 EN1Q05925 392 aaPredicted RBP17.04■□□□□ 0.32
HMGCL-203ENST00000374490 CHRNA2Q15822 529 aa17.04■□□□□ 0.32
HMGCL-203ENST00000374490 PLEKHO1Q53GL0 409 aaPredicted RBP17.04■□□□□ 0.32
HMGCL-203ENST00000374490 FAM182BQ5T319 152 aa17.04■□□□□ 0.32
HMGCL-203ENST00000374490 EXOC6BQ9Y2D4 811 aa17.04■□□□□ 0.32
HMGCL-203ENST00000374490 AMOTQ4VCS5 1084 aa17.03■□□□□ 0.32
HMGCL-203ENST00000374490 GZF1Q9H116 711 aaPredicted RBP17.03■□□□□ 0.32
HMGCL-203ENST00000374490 RTN4Q9NQC3 1192 aaKnown RBP17.03■□□□□ 0.32
HMGCL-203ENST00000374490 SPATA31A1Q5TZJ5 1347 aa17.03■□□□□ 0.32
HMGCL-203ENST00000374490 KDM3BQ7LBC6 1761 aa17.03■□□□□ 0.32
HMGCL-203ENST00000374490 XRCC6P12956 609 aaKnown RBP eCLIP17.03■□□□□ 0.32
HMGCL-203ENST00000374490 ANAPC15P60006 121 aa17.03■□□□□ 0.32
HMGCL-203ENST00000374490 AKAP4Q5JQC9 854 aa17.03■□□□□ 0.32
HMGCL-203ENST00000374490 SSH3Q8TE77 659 aa17.03■□□□□ 0.32
HMGCL-203ENST00000374490 ESYT1Q9BSJ8 1104 aa17.03■□□□□ 0.32
HMGCL-203ENST00000374490 NLRP2Q9NX02 1062 aa17.03■□□□□ 0.32
HMGCL-203ENST00000374490 LRRFIP2Q9Y608 721 aaKnown RBP17.03■□□□□ 0.32
HMGCL-203ENST00000374490 SSFA2P28290 1259 aa17.02■□□□□ 0.31
HMGCL-203ENST00000374490 EVA1CP58658 441 aa17.02■□□□□ 0.31
HMGCL-203ENST00000374490 EIF4A1P60842 406 aaKnown RBP17.02■□□□□ 0.31
HMGCL-203ENST00000374490 USP44Q9H0E7 712 aa17.02■□□□□ 0.31
HMGCL-203ENST00000374490 FOXD4L1Q9NU39 408 aa17.02■□□□□ 0.31
HMGCL-203ENST00000374490 PNMA6EA0A0J9YXQ4 647 aa17.01■□□□□ 0.31
HMGCL-203ENST00000374490 POLA2Q14181 598 aa17.01■□□□□ 0.31
HMGCL-203ENST00000374490 ZNF530Q6P9A1 599 aaPredicted RBP17.01■□□□□ 0.31
HMGCL-203ENST00000374490 FAM196AQ6ZSG2 479 aa17.01■□□□□ 0.31
HMGCL-203ENST00000374490 IL17RAQ96F46 866 aa17.01■□□□□ 0.31
HMGCL-203ENST00000374490 HDAC5Q9UQL6 1122 aa17.01■□□□□ 0.31
HMGCL-203ENST00000374490 BAG4O95429 457 aaKnown RBP17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms