RNA–Protein interactions for RNA: ENST00000372273.7

TMEM254-201, Transcript of transmembrane protein 254, humanhuman

TSL 1 (best)

Gene TMEM254, Length 2,074 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM254-201ENST00000372273 GIGYF1O75420 1035 aaPredicted RBP12.42□□□□□ -0.42
TMEM254-201ENST00000372273 EIF2S2P20042 333 aaKnown RBP12.42□□□□□ -0.42
TMEM254-201ENST00000372273 ARHGEF1Q92888 912 aaKnown RBP12.42□□□□□ -0.42
TMEM254-201ENST00000372273 CFAP44Q96MT7 982 aa12.42□□□□□ -0.42
TMEM254-201ENST00000372273 ARXQ96QS3 562 aa12.42□□□□□ -0.42
TMEM254-201ENST00000372273 RGPD3A6NKT7 1758 aaPredicted RBP12.42□□□□□ -0.42
TMEM254-201ENST00000372273 RGPD4Q7Z3J3 1758 aa12.42□□□□□ -0.42
TMEM254-201ENST00000372273 SNRPA1P09661 255 aaKnown RBP12.41□□□□□ -0.42
TMEM254-201ENST00000372273 VSIG10Q8N0Z9 540 aa12.41□□□□□ -0.42
TMEM254-201ENST00000372273 NGEFQ8N5V2 710 aa12.41□□□□□ -0.42
TMEM254-201ENST00000372273 RTCBQ9Y3I0 505 aaKnown RBP12.41□□□□□ -0.42
TMEM254-201ENST00000372273 ANXA1P04083 346 aa12.41□□□□□ -0.42
TMEM254-201ENST00000372273 ZNF853P0CG23 659 aa12.41□□□□□ -0.42
TMEM254-201ENST00000372273 TSHZ2Q9NRE2 1034 aa12.41□□□□□ -0.42
TMEM254-201ENST00000372273 CCDC87Q9NVE4 849 aa12.41□□□□□ -0.42
TMEM254-201ENST00000372273 SRP68Q9UHB9 627 aaKnown RBP12.41□□□□□ -0.42
TMEM254-201ENST00000372273 TSPYL6Q8N831 410 aa12.4□□□□□ -0.42
TMEM254-201ENST00000372273 C4BP0C0L5 1744 aa12.4□□□□□ -0.42
TMEM254-201ENST00000372273 SIPA1L3O60292 1781 aaPredicted RBP12.4□□□□□ -0.42
TMEM254-201ENST00000372273 C5P01031 1676 aa12.39□□□□□ -0.43
TMEM254-201ENST00000372273 NBPF26B4DH59 902 aa12.39□□□□□ -0.43
TMEM254-201ENST00000372273 STARD3NLO95772 234 aa12.39□□□□□ -0.43
TMEM254-201ENST00000372273 TRAPPC3LQ5T215 181 aa12.39□□□□□ -0.43
TMEM254-201ENST00000372273 NBPF10Q6P3W6 841 aaKnown RBP12.39□□□□□ -0.43
TMEM254-201ENST00000372273 NBPF15Q8N660 670 aa12.39□□□□□ -0.43
TMEM254-201ENST00000372273 C8orf58Q8NAV2 365 aa12.39□□□□□ -0.43
TMEM254-201ENST00000372273 CDCA7LQ96GN5 454 aa12.39□□□□□ -0.43
TMEM254-201ENST00000372273 MYH14Q7Z406 1995 aaKnown RBP12.39□□□□□ -0.43
TMEM254-201ENST00000372273 TCERG1O14776 1098 aaKnown RBP12.39□□□□□ -0.43
TMEM254-201ENST00000372273 RPS6KA4O75676 772 aa12.39□□□□□ -0.43
TMEM254-201ENST00000372273 MYL6BP14649 208 aa12.39□□□□□ -0.43
TMEM254-201ENST00000372273 IRX6P78412 446 aaPredicted RBP12.39□□□□□ -0.43
TMEM254-201ENST00000372273 CCDC27Q2M243 656 aa12.39□□□□□ -0.43
TMEM254-201ENST00000372273 TBC1D2BQ9UPU7 963 aa12.39□□□□□ -0.43
TMEM254-201ENST00000372273 CNTNAP4Q9C0A0 1308 aa12.39□□□□□ -0.43
TMEM254-201ENST00000372273 PROSER3Q2NL68 480 aa12.38□□□□□ -0.43
TMEM254-201ENST00000372273 IFT57Q9NWB7 429 aa12.38□□□□□ -0.43
TMEM254-201ENST00000372273 SSFA2P28290 1259 aa12.38□□□□□ -0.43
TMEM254-201ENST00000372273 RFC4P35249 363 aa12.38□□□□□ -0.43
TMEM254-201ENST00000372273 RC3H1Q5TC82 1133 aaKnown RBP12.38□□□□□ -0.43
TMEM254-201ENST00000372273 TAF1LQ8IZX4 1826 aa12.37□□□□□ -0.43
TMEM254-201ENST00000372273 PTGER2P43116 358 aa12.37□□□□□ -0.43
TMEM254-201ENST00000372273 GNAI1P63096 354 aa12.37□□□□□ -0.43
TMEM254-201ENST00000372273 TJP1Q07157 1748 aa12.37□□□□□ -0.43
TMEM254-201ENST00000372273 SOS1Q07889 1333 aaPredicted RBP12.36□□□□□ -0.43
TMEM254-201ENST00000372273 DUSP27Q5VZP5 1158 aa12.36□□□□□ -0.43
TMEM254-201ENST00000372273 USPL1Q5W0Q7 1092 aa12.36□□□□□ -0.43
TMEM254-201ENST00000372273 ZNF428Q96B54 188 aa12.36□□□□□ -0.43
TMEM254-201ENST00000372273 PPP4R2Q9NY27 417 aa12.36□□□□□ -0.43
TMEM254-201ENST00000372273 UBR2Q8IWV8 1755 aa12.36□□□□□ -0.43
TMEM254-201ENST00000372273 ZNF521Q96K83 1311 aa12.36□□□□□ -0.43
TMEM254-201ENST00000372273 FANCIQ9NVI1 1328 aa12.36□□□□□ -0.43
TMEM254-201ENST00000372273 EIF5P55010 431 aaKnown RBP12.36□□□□□ -0.43
TMEM254-201ENST00000372273 TEX13AQ9BXU3 409 aaPredicted RBP12.36□□□□□ -0.43
TMEM254-201ENST00000372273 SPON1Q9HCB6 807 aa12.36□□□□□ -0.43
TMEM254-201ENST00000372273 GYS1P13807 737 aa12.35□□□□□ -0.43
TMEM254-201ENST00000372273 PDIA6Q15084 440 aa12.35□□□□□ -0.43
TMEM254-201ENST00000372273 MTFR1LQ9H019 292 aa12.35□□□□□ -0.43
TMEM254-201ENST00000372273 SGIP1Q9BQI5 828 aa12.34□□□□□ -0.43
TMEM254-201ENST00000372273 BABAM1Q9NWV8 329 aa12.34□□□□□ -0.43
TMEM254-201ENST00000372273 PPP1R1BQ9UD71 204 aaPredicted RBP12.34□□□□□ -0.43
TMEM254-201ENST00000372273 TUBGCP6Q96RT7 1819 aa12.34□□□□□ -0.43
TMEM254-201ENST00000372273 COL15A1P39059 1388 aa12.34□□□□□ -0.43
TMEM254-201ENST00000372273 CALD1Q05682 793 aaKnown RBP12.34□□□□□ -0.43
TMEM254-201ENST00000372273 BICDL1Q6ZP65 573 aa12.34□□□□□ -0.43
TMEM254-201ENST00000372273 WDR63Q8IWG1 891 aa12.34□□□□□ -0.43
TMEM254-201ENST00000372273 KLHL34Q8N239 644 aa12.34□□□□□ -0.43
TMEM254-201ENST00000372273 BCL2L12Q9HB09 334 aa12.34□□□□□ -0.43
TMEM254-201ENST00000372273 CHPF2Q9P2E5 772 aa12.34□□□□□ -0.43
TMEM254-201ENST00000372273 COL5A3P25940 1745 aaPredicted RBP12.34□□□□□ -0.43
TMEM254-201ENST00000372273 EXOSC9Q06265 439 aaKnown RBP12.33□□□□□ -0.44
TMEM254-201ENST00000372273 AIMP1Q12904 312 aaKnown RBP12.33□□□□□ -0.44
TMEM254-201ENST00000372273 HDGFL1Q5TGJ6 251 aa12.33□□□□□ -0.44
TMEM254-201ENST00000372273 TTLL7Q6ZT98 887 aa12.33□□□□□ -0.44
TMEM254-201ENST00000372273 USP42Q9H9J4 1324 aaKnown RBP12.33□□□□□ -0.44
TMEM254-201ENST00000372273 KDM3BQ7LBC6 1761 aa12.33□□□□□ -0.44
TMEM254-201ENST00000372273 ZPR1O75312 459 aa12.33□□□□□ -0.44
TMEM254-201ENST00000372273 IL6STP40189 918 aaPredicted RBP12.33□□□□□ -0.44
TMEM254-201ENST00000372273 FLAD1Q8NFF5 587 aa12.33□□□□□ -0.44
TMEM254-201ENST00000372273 UBR3Q6ZT12 1888 aa12.32□□□□□ -0.44
TMEM254-201ENST00000372273 MMP10P09238 476 aa12.32□□□□□ -0.44
TMEM254-201ENST00000372273 HLFQ16534 295 aa12.32□□□□□ -0.44
TMEM254-201ENST00000372273 LRP10Q7Z4F1 713 aa12.32□□□□□ -0.44
TMEM254-201ENST00000372273 DZIP3Q86Y13 1208 aaKnown RBP12.32□□□□□ -0.44
TMEM254-201ENST00000372273 WWC3Q9ULE0 1092 aa12.32□□□□□ -0.44
TMEM254-201ENST00000372273 GOLGA2Q08379 1002 aa12.31□□□□□ -0.44
TMEM254-201ENST00000372273 TWISTNBQ3B726 338 aaPredicted RBP12.31□□□□□ -0.44
TMEM254-201ENST00000372273 CCDC24Q8N4L8 307 aa12.31□□□□□ -0.44
TMEM254-201ENST00000372273 ZBTB3Q9H5J0 574 aa12.31□□□□□ -0.44
TMEM254-201ENST00000372273 CASZ1Q86V15 1759 aa12.31□□□□□ -0.44
TMEM254-201ENST00000372273 ADRA2BP18089 450 aa12.31□□□□□ -0.44
TMEM254-201ENST00000372273 NPM2Q86SE8 214 aaKnown RBP12.31□□□□□ -0.44
TMEM254-201ENST00000372273 SLC16A10Q8TF71 515 aa12.31□□□□□ -0.44
TMEM254-201ENST00000372273 PHAXQ9H814 394 aaKnown RBP12.31□□□□□ -0.44
TMEM254-201ENST00000372273 NARFQ9UHQ1 456 aa12.31□□□□□ -0.44
TMEM254-201ENST00000372273 IL16Q14005 1332 aa12.3□□□□□ -0.44
TMEM254-201ENST00000372273 CAMTA2O94983 1202 aa12.3□□□□□ -0.44
TMEM254-201ENST00000372273 TBC1D9BQ66K14 1250 aa12.3□□□□□ -0.44
TMEM254-201ENST00000372273 FHDC1Q9C0D6 1143 aaPredicted RBP12.3□□□□□ -0.44
TMEM254-201ENST00000372273 ZNF831Q5JPB2 1677 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms