RNA–Protein interactions for RNA: ENST00000371146.5

USP1-202, Transcript of ubiquitin specific peptidase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP1, Length 3,507 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-202ENST00000371146 HELBQ8NG08 1087 aaPredicted RBP8.85□□□□□ -0.99
USP1-202ENST00000371146 PROSER3Q2NL68 480 aa8.85□□□□□ -0.99
USP1-202ENST00000371146 CWF19L2Q2TBE0 894 aaKnown RBP8.85□□□□□ -0.99
USP1-202ENST00000371146 SYNE4Q8N205 404 aa8.85□□□□□ -0.99
USP1-202ENST00000371146 ARHGEF1Q92888 912 aaKnown RBP8.85□□□□□ -0.99
USP1-202ENST00000371146 CLEC11AQ9Y240 323 aa8.85□□□□□ -0.99
USP1-202ENST00000371146 UBE3BQ7Z3V4 1068 aa8.85□□□□□ -0.99
USP1-202ENST00000371146 RPGRQ92834 1020 aaKnown RBP8.85□□□□□ -0.99
USP1-202ENST00000371146 USP19O94966 1318 aa8.84□□□□□ -0.99
USP1-202ENST00000371146 CCDC30Q5VVM6 783 aa8.84□□□□□ -0.99
USP1-202ENST00000371146 VPS37DQ86XT2 251 aa8.84□□□□□ -0.99
USP1-202ENST00000371146 CHMP4CQ96CF2 233 aa8.84□□□□□ -0.99
USP1-202ENST00000371146 ISY1Q9ULR0 285 aaKnown RBP8.84□□□□□ -0.99
USP1-202ENST00000371146 NSFL1CQ9UNZ2 370 aaKnown RBP8.84□□□□□ -0.99
USP1-202ENST00000371146 GJA3Q9Y6H8 435 aa8.84□□□□□ -0.99
USP1-202ENST00000371146 NCOA3Q9Y6Q9 1424 aa8.84□□□□□ -0.99
USP1-202ENST00000371146 POLR1AO95602 1720 aaPredicted RBP8.84□□□□□ -0.99
USP1-202ENST00000371146 A0A087WZG4 1122 aa8.84□□□□□ -0.99
USP1-202ENST00000371146 BARGINQ6ZT62 677 aa8.84□□□□□ -0.99
USP1-202ENST00000371146 PANK1Q8TE04 598 aa8.84□□□□□ -0.99
USP1-202ENST00000371146 NEUROD6Q96NK8 337 aa8.84□□□□□ -0.99
USP1-202ENST00000371146 ANKIB1Q9P2G1 1089 aa8.84□□□□□ -0.99
USP1-202ENST00000371146 PPLO60437 1756 aa8.84□□□□□ -0.99
USP1-202ENST00000371146 RGPD8O14715 1765 aaPredicted RBP8.83□□□□□ -1
USP1-202ENST00000371146 G2E3Q7L622 706 aa8.83□□□□□ -1
USP1-202ENST00000371146 COL23A1Q86Y22 540 aaPredicted RBP8.83□□□□□ -1
USP1-202ENST00000371146 CNBD1Q8NA66 436 aa8.83□□□□□ -1
USP1-202ENST00000371146 LINC00116Q8NCU8 138 aa8.83□□□□□ -1
USP1-202ENST00000371146 IL27Q8NEV9 243 aa8.83□□□□□ -1
USP1-202ENST00000371146 NAP1L5Q96NT1 182 aaPredicted RBP8.83□□□□□ -1
USP1-202ENST00000371146 BCL9LQ86UU0 1499 aa8.83□□□□□ -1
USP1-202ENST00000371146 MAP3K5Q99683 1374 aa8.83□□□□□ -1
USP1-202ENST00000371146 IGSF1Q8N6C5 1336 aa8.83□□□□□ -1
USP1-202ENST00000371146 CAMTA1Q9Y6Y1 1673 aa8.83□□□□□ -1
USP1-202ENST00000371146 ZNF827Q17R98 1081 aa8.83□□□□□ -1
USP1-202ENST00000371146 ANKRD13DQ6ZTN6 518 aa8.83□□□□□ -1
USP1-202ENST00000371146 BCCIPQ9P287 314 aaKnown RBP eCLIP8.83□□□□□ -1
USP1-202ENST00000371146 MAP3K2Q9Y2U5 619 aa8.83□□□□□ -1
USP1-202ENST00000371146 F8W031 263 aaPredicted RBP8.83□□□□□ -1
USP1-202ENST00000371146 FHDC1Q9C0D6 1143 aaPredicted RBP8.83□□□□□ -1
USP1-202ENST00000371146 ZNF652Q9Y2D9 606 aa8.83□□□□□ -1
USP1-202ENST00000371146 CDC42BPGQ6DT37 1551 aa8.83□□□□□ -1
USP1-202ENST00000371146 MPHOSPH8Q99549 860 aa8.82□□□□□ -1
USP1-202ENST00000371146 ZNF408Q9H9D4 720 aa8.82□□□□□ -1
USP1-202ENST00000371146 CNNM1Q9NRU3 951 aa8.82□□□□□ -1
USP1-202ENST00000371146 ERVV-2B6SEH9 535 aa8.81□□□□□ -1
USP1-202ENST00000371146 RBM5P52756 815 aaKnown RBP eCLIP8.81□□□□□ -1
USP1-202ENST00000371146 OVOS2A0A0G2JMS6 1433 aa8.81□□□□□ -1
USP1-202ENST00000371146 OVOS2A0A0J9YW53 1432 aa8.81□□□□□ -1
USP1-202ENST00000371146 OVOS2Q6IE36 1432 aa8.81□□□□□ -1
USP1-202ENST00000371146 CHAF1AQ13111 956 aaPredicted RBP8.81□□□□□ -1
USP1-202ENST00000371146 TPTE2Q6XPS3 522 aa8.81□□□□□ -1
USP1-202ENST00000371146 NOB1Q9ULX3 412 aaKnown RBP8.81□□□□□ -1
USP1-202ENST00000371146 QRICH2Q9H0J4 1663 aa8.81□□□□□ -1
USP1-202ENST00000371146 STRCP1A6NGW2 1772 aa8.81□□□□□ -1
USP1-202ENST00000371146 HLFQ16534 295 aa8.81□□□□□ -1
USP1-202ENST00000371146 TNNQ9UQP3 1299 aa8.81□□□□□ -1
USP1-202ENST00000371146 C21orf2O43822 256 aa8.8□□□□□ -1
USP1-202ENST00000371146 RGS3P49796 1198 aa8.8□□□□□ -1
USP1-202ENST00000371146 PROM2Q8N271 834 aa8.8□□□□□ -1
USP1-202ENST00000371146 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.8□□□□□ -1
USP1-202ENST00000371146 RCAN3Q9UKA8 241 aa8.8□□□□□ -1
USP1-202ENST00000371146 SERPINB2P05120 415 aa8.8□□□□□ -1
USP1-202ENST00000371146 STK11IPQ8N1F8 1099 aa8.8□□□□□ -1
USP1-202ENST00000371146 DBF4Q9UBU7 674 aaPredicted RBP8.8□□□□□ -1
USP1-202ENST00000371146 NSD2O96028 1365 aa8.8□□□□□ -1
USP1-202ENST00000371146 HSP90B1P14625 803 aaKnown RBP8.8□□□□□ -1
USP1-202ENST00000371146 EAPPQ56P03 285 aaPredicted RBP8.8□□□□□ -1
USP1-202ENST00000371146 GPR101Q96P66 508 aaPredicted RBP8.8□□□□□ -1
USP1-202ENST00000371146 COL5A2P05997 1499 aaPredicted RBP8.8□□□□□ -1
USP1-202ENST00000371146 E9PSI1 815 aa8.79□□□□□ -1
USP1-202ENST00000371146 RAD21O60216 631 aa8.79□□□□□ -1
USP1-202ENST00000371146 ST5P78524 1137 aa8.79□□□□□ -1
USP1-202ENST00000371146 OLFM4Q6UX06 510 aa8.79□□□□□ -1
USP1-202ENST00000371146 C2CD5Q86YS7 1000 aa8.79□□□□□ -1
USP1-202ENST00000371146 SSH1Q8WYL5 1049 aa8.79□□□□□ -1
USP1-202ENST00000371146 CFAP44Q96MT7 982 aa8.79□□□□□ -1
USP1-202ENST00000371146 NLRP3Q96P20 1036 aa8.79□□□□□ -1
USP1-202ENST00000371146 TRPM1Q7Z4N2 1603 aa8.79□□□□□ -1
USP1-202ENST00000371146 PXDNQ92626 1479 aa8.79□□□□□ -1
USP1-202ENST00000371146 CHD2O14647 1828 aaKnown RBP8.79□□□□□ -1
USP1-202ENST00000371146 H0YIN7 160 aa8.79□□□□□ -1
USP1-202ENST00000371146 SLC4A8Q2Y0W8 1093 aa8.79□□□□□ -1
USP1-202ENST00000371146 TRIM35Q9UPQ4 493 aa8.79□□□□□ -1
USP1-202ENST00000371146 NRXN3Q9Y4C0 1643 aa8.79□□□□□ -1
USP1-202ENST00000371146 RGS12O14924 1447 aa8.79□□□□□ -1
USP1-202ENST00000371146 KLHDC4Q8TBB5 520 aa8.79□□□□□ -1
USP1-202ENST00000371146 MEGF6O75095 1541 aa8.78□□□□□ -1
USP1-202ENST00000371146 CCER2I3L3R5 266 aa8.78□□□□□ -1
USP1-202ENST00000371146 FLIIQ13045 1269 aa8.78□□□□□ -1
USP1-202ENST00000371146 PRKG1Q13976 671 aa8.78□□□□□ -1
USP1-202ENST00000371146 NLGN1Q8N2Q7 840 aa8.78□□□□□ -1
USP1-202ENST00000371146 TEX13AQ9BXU3 409 aaPredicted RBP8.78□□□□□ -1
USP1-202ENST00000371146 SCAF8Q9UPN6 1271 aaKnown RBP8.78□□□□□ -1
USP1-202ENST00000371146 SNAP23O00161 211 aa8.78□□□□□ -1
USP1-202ENST00000371146 IPO8O15397 1037 aaKnown RBP8.78□□□□□ -1
USP1-202ENST00000371146 GIGYF1O75420 1035 aaPredicted RBP8.78□□□□□ -1
USP1-202ENST00000371146 EIF4A1P60842 406 aaKnown RBP8.78□□□□□ -1
USP1-202ENST00000371146 DDX46Q7L014 1031 aaKnown RBP8.78□□□□□ -1
USP1-202ENST00000371146 KDM5AP29375 1690 aaKnown RBP8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms